Ss1.1-Utr1-UTR010020G11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTTTTTTTTCCAACAAACACAAATTTTATTTGTCTATCACAGCACTGCTTCTCAAAACC CAGGACCTGGGTCCCATACATTGCCATGGCCTCAGCACCTGGTAGGGCCCACACACTGTA ACAGGCCTTGCAGGGCTGTTGAGATGAGTAGGTTCATTCAATAAATGCACAATCCGTTTT CTTGGGGTGGGGCAGACCCTGGGGCTATTAGCCACACATTCCTGGCAGGTTAGGGGCTCC TGCAGTGACAGAGCCACAAGCTCACCCCCACGCACAAGGACAGACAGGCAGGGCCGGGCT GCTGGTTTAGTTGGTACTGGAGGGAGTGGGCGGTGGCGGGAGGGGCACCTGCCCTGGCCT GCCTCAGCTCTTGGCTGCCTCAGCTCTTGGAGTAACGCCTCTGCAGCGATTCCCGGTAGA AGCGGAAGACGTGTTGGGAGGCAGTCTGGGCTGCAGCCAGGCACTGCTGGAGCTCAGCAT CTGAGTAGAGTCCCTTGGTGGTGGACATCAGCAGCTTCCGTTCCACACTGTCAAGAGCAA AGGTCAGGACCGCCCGGGCCTCCTTTTCTTGCTTGGCTGTGGGGTCCAGCATGAAGGTCC CATCGGAGTCCAGAGCACAGGTGACCCCACAGAAGAGGGCCCGCATGGGCACACCCGCAT CCACCAGTGCCATGCAGGCAGCATTCAGGCAGCAGGCCAGGAGAGAGCCTGCATCACTGA TGACCTGCAACACCACGGTTATGGAGGTGCGGGGGTGCAGCGCTCCCAGCACTACTGCTT CGCACGTGTTTCTGATCAGCCGCTCCCGGCTCTTCTCCGCTACGCCCGGCAGCCCGATCT TAGGCCTCAGGATCACCTCCAGTGTGGCCTTGTTGAAGATCTCTTTGCGGACCTTCACCT CGGCTGGGCCATACACGCCTGCCAGGACGGAGGTATCCCCTTGCAGGAAAGAGGCAGAGC CATCGGGCCGGGACAACAAGTTTTGTTCGCAGGCAAAGTGCCGGAGAGTACAGCTGGGGC TCCGAGGGCCAGACTCTGCTCCAGACTCGGGGCGTACCTTGGTTTCAGTCTGCATCGACT CCTCCATCGCCGGGGAGCCCACGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTTTTTTTTCCAACAAACACAAATTTTATTTGTCTATCACAGCACTGCTTCTCAAAACC CAGGACCTGGGTCCCATACATTGCCATGGCCTCAGCACCTGGTAGGGCCCACACACTGTA ACAGGCCTTGCAGGGCTGTTGAGATGAGTAGGTTCATTCAATAAATGCACAATCCGTTTT CTTGGGGTGGGGCAGACCCTGGGGCTATTAGCCACACATTCCTGGCAGGTTAGGGGCTCC TGCAGTGACAGAGCCACAAGCTCACCCCCACGCACAAGGACAGACAGGCAGGGCCGGGCT GCTGGTTTAGTTGGTACTGGAGGGAGTGGGCGGTGGCGGGAGGGGCACCTGCCCTGGCCT GCCTCAGCTCTTGGCTGCCTCAGCTCTTGGAGTAACGCCTCTGCAGCGATTCCCGGTAGA AGCGGAAGACGTGTTGGGAGGCAGTCTGGGCTGCAGCCAGGCACTGCTGGAGCTCAGCAT CTGAGTAGAGTCCCTTGGTGGTGGACATCAGCAGCTTCCGTTCCACACTGTCAAGAGCAA AGGTCAGGACCGCCCGGGCCTCCTTTTCTTGCTTGGCTGTGGGGTCCAGCATGAAGGTCC CATCGGAGTCCAGAGCACAGGTGACCCCACAGAAGAGGGCCCGCATGGGCACACCCGCAT CCACCAGTGCCATGCAGGCAGCATTCAGGCAGCAGGCCAGGAGAGAGCCTGCATCACTGA TGACCTGCAACACCACGGTTATGGAGGTGCGGGGGTGCAGCGCTCCCAGCACTACTGCTT CGCACGTGTTTCTGATCAGCCGCTCCCGGCTCTTCTCCGCTACGCCCGGCAGCCCGATCT TAGGCCTCAGGATCACCTCCAGTGTGGCCTTGTTGAAGATCTCTTTGCGGACCTTCACCT CGGCTGGGCCATACACGCCTGCCAGGACGGAGGTATCCCCTTGCAGGAAAGAGGCAGAGC CATCGGGCCGGGACAACAAGTTTTGTTCGCAGGCAAAGTGCCGGAGAGTACAGCTGGGGC TCCGAGGGCCAGACTCTGCTCCAGACTCGGGGCGTACCTTGGTTTCAGTCTGCATCGACT CCTCCATCGCCGGGGAGCCCACGT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 372-474, gnl|bosTau2|chr18 (45845894-45845997) | |
| 372-474, gnl|Hg17|chr19 (46584369-46584472) | |
| 372-474, gnl|Mm7|chr7 (22441747-22441644) | |
| 562-703, gnl|bosTau2|chr18 (45847779-45847920) | |
| 562-703, gnl|canFam2|chr1 (115515663-115515504) | |
| 562-703, gnl|danRer3|chr18 (37162728-37162875) | |
| 562-703, gnl|dasNov1|scaffold_111714 (2750-2592) | |
| 562-703, gnl|echTel1|scaffold_264859 (6568-6724) | |
| 562-703, gnl|fr1|chrUn (65910652-65910808) | |
| 562-703, gnl|hg17|chr19 (46587499-46587658) | |
| 562-703, gnl|Hg17|chr19 (46587509-46587650) | |
| 562-703, gnl|loxAfr1|scaffold_66137 (4903-5060) | |
| 562-703, gnl|mm7|chr7 (22439513-22439361) | |
| 562-703, gnl|Mm7|chr7 (22439508-22439367) | |
| 562-703, gnl|monDom2|scaffold_149 (887466-887616) | |
| 562-703, gnl|oryCun1|scaffold_189275 (4037-4196) | |
| 562-703, gnl|panTro1|chr20 (43568733-43568892) | |
| 562-703, gnl|rheMac2|chr19 (47783801-47783960) | |
| 562-703, gnl|rn3|chr1 (80951858-80951697) | |
| 704-826, gnl|bosTau2|chr18 (45849232-45849354) | |
| 704-826, gnl|canFam2|chr1 (115514244-115514096) | |
| 704-826, gnl|danRer3|chr18 (37165122-37165261) | |
| 704-826, gnl|dasNov1|scaffold_111714 (820-675) | |
| 704-826, gnl|echTel1|scaffold_264859 (7902-8048) | |
| 704-826, gnl|fr1|chrUn (65910904-65911042) | |
| 704-826, gnl|hg17|chr19 (46589571-46589717) | |
| 704-826, gnl|Hg17|chr19 (46589586-46589708) | |
| 704-826, gnl|loxAfr1|scaffold_66137 (6711-6857) | |
| 704-826, gnl|mm7|chr7 (22438408-22438265) | |
| 704-826, gnl|Mm7|chr7 (22438394-22438272) | |
| 704-826, gnl|monDom2|scaffold_149 (888327-888476) | |
| 704-826, gnl|oryCun1|scaffold_189275 (5782-5928) | |
| 704-826, gnl|panTro1|chr20 (43570807-43570953) | |
| 704-826, gnl|rheMac2|chr19 (47785874-47786020) | |
| 704-826, gnl|rn3|chr1 (80950709-80950566) | |
| 704-826, gnl|tetNig1|chr16 (5083644-5083785) | |
| 939-1104, gnl|bosTau2|chr18 (45854398-45854563) | |
| 939-1104, gnl|Hg17|chr19 (46594925-46595089) | |
| 939-1104, gnl|Mm7|chr7 (22433089-22432926) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 372-474, gnl|bosTau2|chr18 (45845894-45845997) | |
| 372-474, gnl|Hg17|chr19 (46584369-46584472) | |
| 372-474, gnl|Mm7|chr7 (22441747-22441644) | |
| 562-703, gnl|bosTau2|chr18 (45847779-45847920) | |
| 562-703, gnl|canFam2|chr1 (115515663-115515504) | |
| 562-703, gnl|danRer3|chr18 (37162728-37162875) | |
| 562-703, gnl|dasNov1|scaffold_111714 (2750-2592) | |
| 562-703, gnl|echTel1|scaffold_264859 (6568-6724) | |
| 562-703, gnl|fr1|chrUn (65910652-65910808) | |
| 562-703, gnl|hg17|chr19 (46587499-46587658) | |
| 562-703, gnl|Hg17|chr19 (46587509-46587650) | |
| 562-703, gnl|loxAfr1|scaffold_66137 (4903-5060) | |
| 562-703, gnl|mm7|chr7 (22439513-22439361) | |
| 562-703, gnl|Mm7|chr7 (22439508-22439367) | |
| 562-703, gnl|monDom2|scaffold_149 (887466-887616) | |
| 562-703, gnl|oryCun1|scaffold_189275 (4037-4196) | |
| 562-703, gnl|panTro1|chr20 (43568733-43568892) | |
| 562-703, gnl|rheMac2|chr19 (47783801-47783960) | |
| 562-703, gnl|rn3|chr1 (80951858-80951697) | |
| 704-826, gnl|bosTau2|chr18 (45849232-45849354) | |
| 704-826, gnl|canFam2|chr1 (115514244-115514096) | |
| 704-826, gnl|danRer3|chr18 (37165122-37165261) | |
| 704-826, gnl|dasNov1|scaffold_111714 (820-675) | |
| 704-826, gnl|echTel1|scaffold_264859 (7902-8048) | |
| 704-826, gnl|fr1|chrUn (65910904-65911042) | |
| 704-826, gnl|hg17|chr19 (46589571-46589717) | |
| 704-826, gnl|Hg17|chr19 (46589586-46589708) | |
| 704-826, gnl|loxAfr1|scaffold_66137 (6711-6857) | |
| 704-826, gnl|mm7|chr7 (22438408-22438265) | |
| 704-826, gnl|Mm7|chr7 (22438394-22438272) | |
| 704-826, gnl|monDom2|scaffold_149 (888327-888476) | |
| 704-826, gnl|oryCun1|scaffold_189275 (5782-5928) | |
| 704-826, gnl|panTro1|chr20 (43570807-43570953) | |
| 704-826, gnl|rheMac2|chr19 (47785874-47786020) | |
| 704-826, gnl|rn3|chr1 (80950709-80950566) | |
| 704-826, gnl|tetNig1|chr16 (5083644-5083785) | |
| 939-1104, gnl|bosTau2|chr18 (45854398-45854563) | |
| 939-1104, gnl|Hg17|chr19 (46594925-46595089) | |
| 939-1104, gnl|Mm7|chr7 (22433089-22432926) |
| Expressed library(ies): 10 entry(ies) | More info |
| Expressed library(ies): 10 entry(ies) | Help | Less info |
| nep (0.183925) | |
| csp (0.161186) | |
| eli (0.151814) | |
| cag (0.151194) | |
| pty (0.142714) | |
| ste (0.135208) | |
| cov (0.132153) | |
| cbr (0.127975) | |
| cly (0.120642) | |
| jej (0.0989218) |
| Expressed library(ies): 10 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nep (0.183925) | |
| csp (0.161186) | |
| eli (0.151814) | |
| cag (0.151194) | |
| pty (0.142714) | |
| ste (0.135208) | |
| cov (0.132153) | |
| cbr (0.127975) | |
| cly (0.120642) | |
| jej (0.0989218) |