Ss1.1-Utr1-UTR010022D04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGATCCGGGGGCCACACCTGCTGCGAGCTCCAGTTCTGAAGCATCATCTTTAGCTGCC CCCATCCAGTGGTCCTGCTGCAGATTATTCTATGAGCCAGTCACAACACCTTGTGGACAC ACTTTTTGCTTAAAATGCCTTGAAAGATGCCTAGATCACAATGCGAAGTGCCCACTGTGC AAAGATGGTCTTTCACAGTGCTTGGCATCAAGGAAATACAGCAAAAATGTCATAATGGAA GAGCTAATAGCTAAATTCCTTCCGGAAGAACTCAAAGAACGAAGGAGGCTTTATGAAGAG GAAATGGAAGAACTTTCTAACTTAAATAAGAACGTGCCTATTTTCGTGTGTACCATGGCC TATCCCACGGTTCCTTGTCCCCTGCACATCTTTGAGCCTTGTTACCGTCTGATGATTCGT AGATGCATCGAGACAGGCACGAGGCAGTTTGGCATGTGCCTTGGAGATCCCGTCAAAGGG TTTGCGGAATATGGCTGCATCCTAGAGATCAGAAATGTTCAGTTTTTTGCCGATGGCCGC TCCGTGGTCGACAGCATAGGCAAGAGGCGCTTCAAGGTCCTCCATCAGGGCCAGCGGGAT GGTTACAACACAGCTGACATCGAATACATTGAGGACCAAAAGGTGCAAGGAGAGGATTGT GCTGAGCTCATGGGATTGCATAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGATCCGGGGGCCACACCTGCTGCGAGCTCCAGTTCTGAAGCATCATCTTTAGCTGCC CCCATCCAGTGGTCCTGCTGCAGATTATTCTATGAGCCAGTCACAACACCTTGTGGACAC ACTTTTTGCTTAAAATGCCTTGAAAGATGCCTAGATCACAATGCGAAGTGCCCACTGTGC AAAGATGGTCTTTCACAGTGCTTGGCATCAAGGAAATACAGCAAAAATGTCATAATGGAA GAGCTAATAGCTAAATTCCTTCCGGAAGAACTCAAAGAACGAAGGAGGCTTTATGAAGAG GAAATGGAAGAACTTTCTAACTTAAATAAGAACGTGCCTATTTTCGTGTGTACCATGGCC TATCCCACGGTTCCTTGTCCCCTGCACATCTTTGAGCCTTGTTACCGTCTGATGATTCGT AGATGCATCGAGACAGGCACGAGGCAGTTTGGCATGTGCCTTGGAGATCCCGTCAAAGGG TTTGCGGAATATGGCTGCATCCTAGAGATCAGAAATGTTCAGTTTTTTGCCGATGGCCGC TCCGTGGTCGACAGCATAGGCAAGAGGCGCTTCAAGGTCCTCCATCAGGGCCAGCGGGAT GGTTACAACACAGCTGACATCGAATACATTGAGGACCAAAAGGTGCAAGGAGAGGATTGT GCTGAGCTCATGGGATTGCATAAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 197-320, gnl|bosTau2|chr11 (67203093-67202970) | |
| 197-320, gnl|canFam2|chrX (94199416-94199520) | |
| 197-320, gnl|dasNov1|scaffold_2731 (37851-37744) | |
| 197-320, gnl|echTel1|scaffold_281288 (48920-48814) | |
| 197-320, gnl|fr1|chrUn (229860989-229860904) | |
| 197-320, gnl|galGal2|chr4 (16438652-16438550) | |
| 197-320, gnl|hg17|chrX (117924950-117925052) | |
| 197-320, gnl|Hg17|chrX (117924969-117925092) | |
| 197-320, gnl|loxAfr1|scaffold_20349 (25619-25513) | |
| 197-320, gnl|mm7|chrX (31113582-31113686) | |
| 197-320, gnl|Mm7|chrX (31113603-31113726) | |
| 197-320, gnl|monDom2|scaffold_156 (359710-359815) | |
| 197-320, gnl|oryCun1|scaffold_66876 (109-6) | |
| 197-320, gnl|panTro1|chrX (121923818-121923922) | |
| 197-320, gnl|rheMac2|chrX (117263545-117263647) | |
| 197-320, gnl|rn3|chrX (8581673-8581569) | |
| 197-320, gnl|tetNig1|chr2 (17963860-17963775) | |
| 197-320, gnl|xenTro1|scaffold_263 (607631-607720) | |
| 479-645, gnl|bosTau2|chr11 (67199631-67199465) | |
| 479-645, gnl|canFam2|chrX (94202248-94202435) | |
| 479-645, gnl|danRer3|chr14 (55932845-55932656) | |
| 479-645, gnl|dasNov1|scaffold_2731 (33785-33598) | |
| 479-645, gnl|echTel1|scaffold_281288 (45060-44887) | |
| 479-645, gnl|fr1|chrUn (229860532-229860337) | |
| 479-645, gnl|galGal2|chr4 (16436815-16436637) | |
| 479-645, gnl|hg17|chrX (117928881-117929068) | |
| 479-645, gnl|Hg17|chrX (117928883-117929049) | |
| 479-645, gnl|loxAfr1|scaffold_4850 (64251-64102) | |
| 479-645, gnl|mm7|chrX (31117246-31117433) | |
| 479-645, gnl|Mm7|chrX (31117248-31117414) | |
| 479-645, gnl|monDom2|scaffold_156 (362463-362652) | |
| 479-645, gnl|oryCun1|scaffold_205390 (9459-9272) | |
| 479-645, gnl|panTro1|chrX (121927832-121928019) | |
| 479-645, gnl|rheMac2|chrX (117267497-117267684) | |
| 479-645, gnl|rn3|chrX (8577980-8577793) | |
| 479-645, gnl|tetNig1|chr2 (17963365-17963202) | |
| 479-645, gnl|xenTro1|scaffold_263 (609567-609737) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 197-320, gnl|bosTau2|chr11 (67203093-67202970) | |
| 197-320, gnl|canFam2|chrX (94199416-94199520) | |
| 197-320, gnl|dasNov1|scaffold_2731 (37851-37744) | |
| 197-320, gnl|echTel1|scaffold_281288 (48920-48814) | |
| 197-320, gnl|fr1|chrUn (229860989-229860904) | |
| 197-320, gnl|galGal2|chr4 (16438652-16438550) | |
| 197-320, gnl|hg17|chrX (117924950-117925052) | |
| 197-320, gnl|Hg17|chrX (117924969-117925092) | |
| 197-320, gnl|loxAfr1|scaffold_20349 (25619-25513) | |
| 197-320, gnl|mm7|chrX (31113582-31113686) | |
| 197-320, gnl|Mm7|chrX (31113603-31113726) | |
| 197-320, gnl|monDom2|scaffold_156 (359710-359815) | |
| 197-320, gnl|oryCun1|scaffold_66876 (109-6) | |
| 197-320, gnl|panTro1|chrX (121923818-121923922) | |
| 197-320, gnl|rheMac2|chrX (117263545-117263647) | |
| 197-320, gnl|rn3|chrX (8581673-8581569) | |
| 197-320, gnl|tetNig1|chr2 (17963860-17963775) | |
| 197-320, gnl|xenTro1|scaffold_263 (607631-607720) | |
| 479-645, gnl|bosTau2|chr11 (67199631-67199465) | |
| 479-645, gnl|canFam2|chrX (94202248-94202435) | |
| 479-645, gnl|danRer3|chr14 (55932845-55932656) | |
| 479-645, gnl|dasNov1|scaffold_2731 (33785-33598) | |
| 479-645, gnl|echTel1|scaffold_281288 (45060-44887) | |
| 479-645, gnl|fr1|chrUn (229860532-229860337) | |
| 479-645, gnl|galGal2|chr4 (16436815-16436637) | |
| 479-645, gnl|hg17|chrX (117928881-117929068) | |
| 479-645, gnl|Hg17|chrX (117928883-117929049) | |
| 479-645, gnl|loxAfr1|scaffold_4850 (64251-64102) | |
| 479-645, gnl|mm7|chrX (31117246-31117433) | |
| 479-645, gnl|Mm7|chrX (31117248-31117414) | |
| 479-645, gnl|monDom2|scaffold_156 (362463-362652) | |
| 479-645, gnl|oryCun1|scaffold_205390 (9459-9272) | |
| 479-645, gnl|panTro1|chrX (121927832-121928019) | |
| 479-645, gnl|rheMac2|chrX (117267497-117267684) | |
| 479-645, gnl|rn3|chrX (8577980-8577793) | |
| 479-645, gnl|tetNig1|chr2 (17963365-17963202) | |
| 479-645, gnl|xenTro1|scaffold_263 (609567-609737) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbl (0.229595) | |
| cli (0.152812) |