Ss1.1-Utr1-UTR010024F06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTGCCCCGGAAGTGCAAGTTCGGAGGTCTTGCAGGTGGGGATTCCGCCGGCAAGGCGGCT GCTTTCGAGATGCCAGGGGCTGCCGCCAAGAGCTCGGAGTTGTCCGAGAGGATCGAGAGT TTCGTGGAGGCACTGAAACGGGGCAGCGGGCGGCACAGCTCTGAGGACATGGCCCGGGAG ACCCTGGGACTGCTGCGCCGGATCATCACGGACTACCGCTGGAGCAACGCAGGGGAGCTG ATGGAACTGATCCGCAGAGAAGGCCGGAGGATGACGGCCGCGCAGCCCTCAGAGACCACC GTGGGCAACATGGTGCGGAGAGTGCTCAGGATCATCCGGGAGGAGTATGGCAGACTCCAT GGACGCAGCGACGAAAGCGATCAGCAGGAGTCCCTGCACAAACTCTTGACGTCCGGGGGC CTGAGCGAGGATTTCCGCTCTCATTATGCTGAACTCCAGTCCAACATCATTGAGGCAATT AATGAGCTGCTTGTGGAACTGGAAGGGACAACCGAGAACATTGCAGCCCAGGCCCTGGAA CACATCCACTCCAATGAGGTGATCATGACCATTGGCTTCTCCCGAACAGTAGAGGCCTTC CTCAAAGAGGCAGCCCGAAAGAGGAAATTCCATGTCATTGTGGCAGAGTGTGCTCCTTTC TGTCAGGGTCATGAGATGGCGGTCAATTTGTCCAAAGCAGGTATTGAGACAACTGTCATG ACTGATGCTGCCATTTTTGCTGTTATGTCAAGAGTCAATAAGGTGATCATTGGCACAAAG ACCATCCTGGCCAATGGTGCTCTGAGAGCTGTGACAGGAACACATACTTTAGCACTGGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTGCCCCGGAAGTGCAAGTTCGGAGGTCTTGCAGGTGGGGATTCCGCCGGCAAGGCGGCT GCTTTCGAGATGCCAGGGGCTGCCGCCAAGAGCTCGGAGTTGTCCGAGAGGATCGAGAGT TTCGTGGAGGCACTGAAACGGGGCAGCGGGCGGCACAGCTCTGAGGACATGGCCCGGGAG ACCCTGGGACTGCTGCGCCGGATCATCACGGACTACCGCTGGAGCAACGCAGGGGAGCTG ATGGAACTGATCCGCAGAGAAGGCCGGAGGATGACGGCCGCGCAGCCCTCAGAGACCACC GTGGGCAACATGGTGCGGAGAGTGCTCAGGATCATCCGGGAGGAGTATGGCAGACTCCAT GGACGCAGCGACGAAAGCGATCAGCAGGAGTCCCTGCACAAACTCTTGACGTCCGGGGGC CTGAGCGAGGATTTCCGCTCTCATTATGCTGAACTCCAGTCCAACATCATTGAGGCAATT AATGAGCTGCTTGTGGAACTGGAAGGGACAACCGAGAACATTGCAGCCCAGGCCCTGGAA CACATCCACTCCAATGAGGTGATCATGACCATTGGCTTCTCCCGAACAGTAGAGGCCTTC CTCAAAGAGGCAGCCCGAAAGAGGAAATTCCATGTCATTGTGGCAGAGTGTGCTCCTTTC TGTCAGGGTCATGAGATGGCGGTCAATTTGTCCAAAGCAGGTATTGAGACAACTGTCATG ACTGATGCTGCCATTTTTGCTGTTATGTCAAGAGTCAATAAGGTGATCATTGGCACAAAG ACCATCCTGGCCAATGGTGCTCTGAGAGCTGTGACAGGAACACATACTTTAGCACTGGCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 1-237, gnl|bosTau2|chr10 (56621040-56621275) | |
| 1-237, gnl|Hg17|chr14 (74539370-74539614) | |
| 1-237, gnl|Mm7|chr12 (83219330-83219567) | |
| 502-667, gnl|bosTau2|chr10 (56622711-56622876) | |
| 502-667, gnl|canFam2|chr8 (51150393-51150588) | |
| 502-667, gnl|danRer3|chr20 (53907158-53906972) | |
| 502-667, gnl|echTel1|scaffold_317142 (4791-4985) | |
| 502-667, gnl|fr1|chrUn (308163342-308163161) | |
| 502-667, gnl|galGal2|chr5 (34980412-34980586) | |
| 502-667, gnl|hg17|chr14 (74541176-74541367) | |
| 502-667, gnl|Hg17|chr14 (74541192-74541357) | |
| 502-667, gnl|loxAfr1|scaffold_6088 (44529-44723) | |
| 502-667, gnl|mm7|chr12 (83221298-83221490) | |
| 502-667, gnl|Mm7|chr12 (83221314-83221479) | |
| 502-667, gnl|monDom2|scaffold_8 (59475566-59475381) | |
| 502-667, gnl|panTro1|chr15 (74544412-74544603) | |
| 502-667, gnl|rheMac2|chr7 (138115618-138115809) | |
| 502-667, gnl|rn3|chr6 (109271253-109271445) | |
| 502-667, gnl|tetNig1|chr14 (5249557-5249385) | |
| 502-667, gnl|xenTro1|scaffold_423 (304402-304204) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-237, gnl|bosTau2|chr10 (56621040-56621275) | |
| 1-237, gnl|Hg17|chr14 (74539370-74539614) | |
| 1-237, gnl|Mm7|chr12 (83219330-83219567) | |
| 502-667, gnl|bosTau2|chr10 (56622711-56622876) | |
| 502-667, gnl|canFam2|chr8 (51150393-51150588) | |
| 502-667, gnl|danRer3|chr20 (53907158-53906972) | |
| 502-667, gnl|echTel1|scaffold_317142 (4791-4985) | |
| 502-667, gnl|fr1|chrUn (308163342-308163161) | |
| 502-667, gnl|galGal2|chr5 (34980412-34980586) | |
| 502-667, gnl|hg17|chr14 (74541176-74541367) | |
| 502-667, gnl|Hg17|chr14 (74541192-74541357) | |
| 502-667, gnl|loxAfr1|scaffold_6088 (44529-44723) | |
| 502-667, gnl|mm7|chr12 (83221298-83221490) | |
| 502-667, gnl|Mm7|chr12 (83221314-83221479) | |
| 502-667, gnl|monDom2|scaffold_8 (59475566-59475381) | |
| 502-667, gnl|panTro1|chr15 (74544412-74544603) | |
| 502-667, gnl|rheMac2|chr7 (138115618-138115809) | |
| 502-667, gnl|rn3|chr6 (109271253-109271445) | |
| 502-667, gnl|tetNig1|chr14 (5249557-5249385) | |
| 502-667, gnl|xenTro1|scaffold_423 (304402-304204) |
| Expressed library(ies): 11 entry(ies) | More info |
| Expressed library(ies): 11 entry(ies) | Help | Less info |
| clu (0.239292) | |
| ill (0.175593) | |
| nje (0.16592) | |
| nco (0.161734) | |
| pty (0.142714) | |
| hlv (0.139256) | |
| cov (0.132153) | |
| cbl (0.114797) | |
| jca (0.11396) | |
| cty (0.10408) | |
| eje (0.0988338) |
| Expressed library(ies): 11 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.239292) | |
| ill (0.175593) | |
| nje (0.16592) | |
| nco (0.161734) | |
| pty (0.142714) | |
| hlv (0.139256) | |
| cov (0.132153) | |
| cbl (0.114797) | |
| jca (0.11396) | |
| cty (0.10408) | |
| eje (0.0988338) |