Ss1.1-Utr1-UTR010024H07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATGCGTCCAAGGTCAAGTGCTCGGGGCCGGGCCTGAGCCCTGGCATGGTCCGCGCCAACC TCCCTCAGTCCTTCCAGGTGGACACGAGCAAGGCTGGCGTGGCCCCCCTGCAGGTCAAAG TGCAGGGGCCCAAAGGCCTGGTGGAGCCAGTGGACGTGGTGGACAATGCCGATGGCACCC AGACCGTCAACTATGTGCCCAGCCGCGAGGGGCCCTACAGCATCTCGGTGTTATATGGGG AGGAAGAGGTGCCCCGAAGCCCCTTCAAGGTCAAGGTGCTGCCCACGCATGACGCCAGCA AGGTAAAGGCCAGCGGCCCCGGGCTCAACACCACCGGCGTGCCCGCCAGCCTGCCTGTGG AGTTCACCATCGATGCAAAGGACGCGGGCGAGGGCCTGCTGGCTGTCCAGATCACGGACC CCGAGGGCAAGCCCAAGAAGACGCACATCCAGGACAACCACGACGGCACGTACACGGTGG CCTACGTGCCGGACGTGACGGGCCGCTACACCATCCTCATCAAGTATGGTGGTGACGAGA TCCCCTTCTCCCCGTACCGCGTCCGGGCCGTGCCCACTGGGGACGCCAGCAAGTGCACCG TCACAGGTGCTGGCATCGGCCCGACCATCCAGATAGGGGAGGAGACGGTGATCACCGTGG ACACCAAGGCGGCAGGCAAAGGCAAGGTGACCTGCACCGTGTGCACACCCGACGGCTCTG AGGTGGACGTGGACGTGGTCGAGAACGAGGACGGCACCTTCGACATCTTCTACACGGCCC CCCAGCCGGGCAAATATGTCATCTGCGTGCGCTTCGGCGGCGAGCACGTGCCCAACAGCC CCTTCCAAGTGACGGCTCTGGCTGGAGAGCAGCCCTCGGTGCAGCCCCCGCTGCGGCCGC AGCAGCTGGCCCCGCCGTACACCTACGCCCAGGGCGGCCAGCAGACCTGGGCCCCAGAAA GACCCTTGGTGGGCGTCAACGGGCTGGATGTGACCAGCCTGAGGCCCTTCGACCTTGTCA TCCCCTTCACCATCAAGAAGGGCGAAATCACTGGGGAGGTGCGGATGCCCTCGGGCAAGG TGGCGCAGCCAGCCATCACCGACAACAAGGACGGCACCGTGACCGTGCGCTACGCGCCCA GTGAGGCCGGCCTGCACGAGATGGACATCCGCTACGACAATATGCACATCCCAGGAAGCC CCCTGCAGTTCTATGTGGATTATGTCAACTGCGGCCACGTCACGGCCTACGGGCCCGGCC TCAGCCACGGGGTGGTGAACAAGCCTGCTGTCTTCACCGTCAACACCAAGGATGCGGGAG AGGGAGGCTTGTCCCTGGCCATCGAGGGGCCATCCAAAGCCGAAATCAGCTGCACCGACA ACCAAGATGGGACGTGCAGCGTCTCCTACCTGCCCGTGCTGCCTGGCGACTACAGCATCC TGGTCAAGTACAACGAGCAGCACATCCCAGGCAGCCCCTTCACGGCCAGGGTCACAGGTG ACGACTCGATGCGCATGTCCCACCTGAAAGTGGGCTCTGCCGCCGACATCCCCATCAATA TCTCCGAGACGGACCTCAGCCTGCTGACAGCCACGGTGGTGCCACCCTCAGGCCGGGAGG AGCCCTGCCTGCTGAAGAGGCTGCGCAATGGCCACGTGGGGATCTCGTTCGTGCCCAAGG AGACAGGCGAGCACCTGGTGCATGTGAAGAAGAATGGCCAGCATGTGGCGAGCAGCCCCA TCCCAGTGGTGATCAGCCAGTCGGAGATCGGGGATGCCAGCCGCGTGCGGGTCTCGGGCC GGGGCCTCCACGAAGGCCACACCTTTGAGCCTGCAGAGTTTATCATTGACACCCGTGATG CAGGCTACGGTGGGCTCAGCCTGTCCATCGAGGGTCCCAGCAAGGTGGACATCAACACAG AGGACCTGGAGGATGGCACGTGCAGGGTCACCTACTGCCCCACGGAGCCGGGCAACTACA TCATCAACATCAAGTTCGCCGACCAACACGTGCCTGGCAGCCCGTTCTCCGTGAAAGTGA CCGGTGAGGGCCGGGTGAAAGAGAGCATCACACGCAGGCAACGGGCTCCTTCGGTGGCTA ATGTCGGCAGTCATTGCGACCTCAGCCTGAAGATCCCTGAAATTAGCATCCAGGACATGA CAGCCCAGGTGACCAGCCCATCAGGCAAGAGCCACGAGGCTGAGATCGTGGAAGGGGAGA ACCATACCTACTGCATCCGCTTCGTGCCCGCTGAGATGGGCATGCACACGGTCAGCGTCA AGTACAAGGGCCAGCACGTGCCTGGGAGCCCTTTCCAGTTCACCGTGGGGCCCCTGGGGG AAGGGGGCGCCCACAAGGTCCGCGCCGGGGGCCCTGGCCTGGAGAGGGCTGAAGCTGGAG TGCCAGCTGAGTTCAGCATCTGGACCAGGGAAGCTGGCGCCGGGGGCCTGGCCATTGCTG TTGAGGGCCCCAGCAAGGCCGAGATCTCCTTCGAGGACCGCAAGGACGGCTCCTGCGGCG TGGCCTATGTGGTCCAGGAGCCAGGTGACTACGAGGTCTCCGTCAAGTTCAACGAGGAGC ACATCCCTGACAGCCCTTTTGTGGTGCCCGTGGCCTCTCCGTCTGGTGACGCCCGCCGCC TTACTGTTTCTAGTCTTCAGGAGTCAGGGCTAAAGGTCAACCAGCCAGCCTCTTTTGCAG TCAGCCTGAATGGGGCTAAGGGGGCGATCGATGCCAAGGTGCACAGCCCCTCGGGAGCCC TGGAGGAGTGCTATGTCACAGAGATCGACCAAGATAAGTACGCTGTGCGCTTTATCCCAC GAGAGAACGGCGTCTACCTGATTGATGTCAAGTTCAATGGCACCCACATCCCTGGAAGCC CCTTCAAGATCCGAGTCGGGGAGCCTGGGCATGGAGGGGACCCAGGCCTGGTGTCCGCTT ACGGAGCTGGCCTGGAAGGCGGCGTCACAGGGAGCCCCGCCGAGTTTATTGTGAACACGA GCAATGCGGGAGCCGGTGCCCTGTCGGTCACCATCGACGGGCCCTCCAAGGTGAAGATGG ATTGCCAGGAGTGCCCGGAGGGCTACCGCGTCACCTACACCCCCATGGCACCTGGCAGCT ACCTCATCTCCATCAAGTATGGTGGCCCCTACCACATTGGGGGCAGCCCCTTCAAGGCCA GAGTCACCGGTCACCGTCTCGTCAGCAACCACAGCCTCCACGAGACGTCGTCAGTGTTTG TGGACTCCCTGACCAAGACTGCCAGTGCCCCCCAGCATGGGGCCCCGGGCCCAGGTGCCG CCGACGCCAGCAAGGTGCTGGCCAAGGGCCTGGGGCTGAGCAAGGCCTACGTGGGCCAGA AGGGCAGCTTCACGGTAGACTGCAGCAAAGCAGGCAACAACATGCTGCTGGTGGGCGTGC ATGGCCCCCGAACGCCCTGCGAGGAGATCCTGGTGAAGCACGTGGGCAGCAGGCTCTACA GCGTCTCCTACCTGCTCAAGGACAAGGGGGAGTACACGCTGGTGGTCAAATGGGGCGACG AGCACATCCCGGGCAGCCCCTACCGCGTCCTGGTGCCCTGAGCTCTGTGCCCTGGCCAGC CAGCAGCTCCCAGGATGAGAAGCGCCCCCGCGCCTGCCCTCCGCCGCCCAAGCAGCCCTC CCACCCCAGCCCTGGTCAGCCCTGGCCAGCCCTGGCCACCCCGTCACTGCAGCCAACCCG GCCCTGTGCTGCGCTCACCTGCCTCCACTTGGGCAAAGGAGAGAGGCGAGCAGAGGGAGC CATTTGGTGGCCCTGCCTGTCTTCTCTGGTTCTGGGAGGGGTGAGAGGCGGGGGTCTTGT GCACACCCACTCGCTAGTGCCCTTCCCTCGCCAAGAAGAATAAAACTGCTTCCATTCTCC TGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATGCGTCCAAGGTCAAGTGCTCGGGGCCGGGCCTGAGCCCTGGCATGGTCCGCGCCAACC TCCCTCAGTCCTTCCAGGTGGACACGAGCAAGGCTGGCGTGGCCCCCCTGCAGGTCAAAG TGCAGGGGCCCAAAGGCCTGGTGGAGCCAGTGGACGTGGTGGACAATGCCGATGGCACCC AGACCGTCAACTATGTGCCCAGCCGCGAGGGGCCCTACAGCATCTCGGTGTTATATGGGG AGGAAGAGGTGCCCCGAAGCCCCTTCAAGGTCAAGGTGCTGCCCACGCATGACGCCAGCA AGGTAAAGGCCAGCGGCCCCGGGCTCAACACCACCGGCGTGCCCGCCAGCCTGCCTGTGG AGTTCACCATCGATGCAAAGGACGCGGGCGAGGGCCTGCTGGCTGTCCAGATCACGGACC CCGAGGGCAAGCCCAAGAAGACGCACATCCAGGACAACCACGACGGCACGTACACGGTGG CCTACGTGCCGGACGTGACGGGCCGCTACACCATCCTCATCAAGTATGGTGGTGACGAGA TCCCCTTCTCCCCGTACCGCGTCCGGGCCGTGCCCACTGGGGACGCCAGCAAGTGCACCG TCACAGGTGCTGGCATCGGCCCGACCATCCAGATAGGGGAGGAGACGGTGATCACCGTGG ACACCAAGGCGGCAGGCAAAGGCAAGGTGACCTGCACCGTGTGCACACCCGACGGCTCTG AGGTGGACGTGGACGTGGTCGAGAACGAGGACGGCACCTTCGACATCTTCTACACGGCCC CCCAGCCGGGCAAATATGTCATCTGCGTGCGCTTCGGCGGCGAGCACGTGCCCAACAGCC CCTTCCAAGTGACGGCTCTGGCTGGAGAGCAGCCCTCGGTGCAGCCCCCGCTGCGGCCGC AGCAGCTGGCCCCGCCGTACACCTACGCCCAGGGCGGCCAGCAGACCTGGGCCCCAGAAA GACCCTTGGTGGGCGTCAACGGGCTGGATGTGACCAGCCTGAGGCCCTTCGACCTTGTCA TCCCCTTCACCATCAAGAAGGGCGAAATCACTGGGGAGGTGCGGATGCCCTCGGGCAAGG TGGCGCAGCCAGCCATCACCGACAACAAGGACGGCACCGTGACCGTGCGCTACGCGCCCA GTGAGGCCGGCCTGCACGAGATGGACATCCGCTACGACAATATGCACATCCCAGGAAGCC CCCTGCAGTTCTATGTGGATTATGTCAACTGCGGCCACGTCACGGCCTACGGGCCCGGCC TCAGCCACGGGGTGGTGAACAAGCCTGCTGTCTTCACCGTCAACACCAAGGATGCGGGAG AGGGAGGCTTGTCCCTGGCCATCGAGGGGCCATCCAAAGCCGAAATCAGCTGCACCGACA ACCAAGATGGGACGTGCAGCGTCTCCTACCTGCCCGTGCTGCCTGGCGACTACAGCATCC TGGTCAAGTACAACGAGCAGCACATCCCAGGCAGCCCCTTCACGGCCAGGGTCACAGGTG ACGACTCGATGCGCATGTCCCACCTGAAAGTGGGCTCTGCCGCCGACATCCCCATCAATA TCTCCGAGACGGACCTCAGCCTGCTGACAGCCACGGTGGTGCCACCCTCAGGCCGGGAGG AGCCCTGCCTGCTGAAGAGGCTGCGCAATGGCCACGTGGGGATCTCGTTCGTGCCCAAGG AGACAGGCGAGCACCTGGTGCATGTGAAGAAGAATGGCCAGCATGTGGCGAGCAGCCCCA TCCCAGTGGTGATCAGCCAGTCGGAGATCGGGGATGCCAGCCGCGTGCGGGTCTCGGGCC GGGGCCTCCACGAAGGCCACACCTTTGAGCCTGCAGAGTTTATCATTGACACCCGTGATG CAGGCTACGGTGGGCTCAGCCTGTCCATCGAGGGTCCCAGCAAGGTGGACATCAACACAG AGGACCTGGAGGATGGCACGTGCAGGGTCACCTACTGCCCCACGGAGCCGGGCAACTACA TCATCAACATCAAGTTCGCCGACCAACACGTGCCTGGCAGCCCGTTCTCCGTGAAAGTGA CCGGTGAGGGCCGGGTGAAAGAGAGCATCACACGCAGGCAACGGGCTCCTTCGGTGGCTA ATGTCGGCAGTCATTGCGACCTCAGCCTGAAGATCCCTGAAATTAGCATCCAGGACATGA CAGCCCAGGTGACCAGCCCATCAGGCAAGAGCCACGAGGCTGAGATCGTGGAAGGGGAGA ACCATACCTACTGCATCCGCTTCGTGCCCGCTGAGATGGGCATGCACACGGTCAGCGTCA AGTACAAGGGCCAGCACGTGCCTGGGAGCCCTTTCCAGTTCACCGTGGGGCCCCTGGGGG AAGGGGGCGCCCACAAGGTCCGCGCCGGGGGCCCTGGCCTGGAGAGGGCTGAAGCTGGAG TGCCAGCTGAGTTCAGCATCTGGACCAGGGAAGCTGGCGCCGGGGGCCTGGCCATTGCTG TTGAGGGCCCCAGCAAGGCCGAGATCTCCTTCGAGGACCGCAAGGACGGCTCCTGCGGCG TGGCCTATGTGGTCCAGGAGCCAGGTGACTACGAGGTCTCCGTCAAGTTCAACGAGGAGC ACATCCCTGACAGCCCTTTTGTGGTGCCCGTGGCCTCTCCGTCTGGTGACGCCCGCCGCC TTACTGTTTCTAGTCTTCAGGAGTCAGGGCTAAAGGTCAACCAGCCAGCCTCTTTTGCAG TCAGCCTGAATGGGGCTAAGGGGGCGATCGATGCCAAGGTGCACAGCCCCTCGGGAGCCC TGGAGGAGTGCTATGTCACAGAGATCGACCAAGATAAGTACGCTGTGCGCTTTATCCCAC GAGAGAACGGCGTCTACCTGATTGATGTCAAGTTCAATGGCACCCACATCCCTGGAAGCC CCTTCAAGATCCGAGTCGGGGAGCCTGGGCATGGAGGGGACCCAGGCCTGGTGTCCGCTT ACGGAGCTGGCCTGGAAGGCGGCGTCACAGGGAGCCCCGCCGAGTTTATTGTGAACACGA GCAATGCGGGAGCCGGTGCCCTGTCGGTCACCATCGACGGGCCCTCCAAGGTGAAGATGG ATTGCCAGGAGTGCCCGGAGGGCTACCGCGTCACCTACACCCCCATGGCACCTGGCAGCT ACCTCATCTCCATCAAGTATGGTGGCCCCTACCACATTGGGGGCAGCCCCTTCAAGGCCA GAGTCACCGGTCACCGTCTCGTCAGCAACCACAGCCTCCACGAGACGTCGTCAGTGTTTG TGGACTCCCTGACCAAGACTGCCAGTGCCCCCCAGCATGGGGCCCCGGGCCCAGGTGCCG CCGACGCCAGCAAGGTGCTGGCCAAGGGCCTGGGGCTGAGCAAGGCCTACGTGGGCCAGA AGGGCAGCTTCACGGTAGACTGCAGCAAAGCAGGCAACAACATGCTGCTGGTGGGCGTGC ATGGCCCCCGAACGCCCTGCGAGGAGATCCTGGTGAAGCACGTGGGCAGCAGGCTCTACA GCGTCTCCTACCTGCTCAAGGACAAGGGGGAGTACACGCTGGTGGTCAAATGGGGCGACG AGCACATCCCGGGCAGCCCCTACCGCGTCCTGGTGCCCTGAGCTCTGTGCCCTGGCCAGC CAGCAGCTCCCAGGATGAGAAGCGCCCCCGCGCCTGCCCTCCGCCGCCCAAGCAGCCCTC CCACCCCAGCCCTGGTCAGCCCTGGCCAGCCCTGGCCACCCCGTCACTGCAGCCAACCCG GCCCTGTGCTGCGCTCACCTGCCTCCACTTGGGCAAAGGAGAGAGGCGAGCAGAGGGAGC CATTTGGTGGCCCTGCCTGTCTTCTCTGGTTCTGGGAGGGGTGAGAGGCGGGGGTCTTGT GCACACCCACTCGCTAGTGCCCTTCCCTCGCCAAGAAGAATAAAACTGCTTCCATTCTCC TGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
| 19-3126, - strand, RNAz p=0.992088 | |
| 1324-1443, - strand, RNAz p=0.959362 | |
| 2258-2377, - strand, RNAz p=0.576862 |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 19-3126, - strand, RNAz p=0.992088 | |
| 1324-1443, - strand, RNAz p=0.959362 | |
| 2258-2377, - strand, RNAz p=0.576862 |
| Aligned organism(s): 148 entry(ies) | More info |
| Aligned organism(s): 148 entry(ies) | Help | Less info |
| 3-136, gnl|bosTau2|chrX (14351679-14351546) | |
| 3-136, gnl|canFam2|chrX (125116516-125116323) | |
| 3-136, gnl|danRer3|chr23 (26253359-26253171) | |
| 3-136, gnl|dasNov1|scaffold_1198 (39720-39909) | |
| 3-136, gnl|echTel1|scaffold_318257 (39032-39223) | |
| 3-136, gnl|fr1|chrUn (177078963-177079144) | |
| 3-136, gnl|galGal2|chr12 (8966317-8966130) | |
| 3-136, gnl|hg17|chrX (153108195-153108388) | |
| 3-136, gnl|Hg17|chrX (153108331-153108198) | |
| 3-136, gnl|loxAfr1|scaffold_56236 (7844-8032) | |
| 3-136, gnl|mm7|chrX (69621249-69621442) | |
| 3-136, gnl|Mm7|chrX (69621385-69621252) | |
| 3-136, gnl|monDom2|scaffold_197 (121205-121018) | |
| 3-136, gnl|oryCun1|scaffold_201170 (88789-88597) | |
| 3-136, gnl|panTro1|chrX (158432589-158432396) | |
| 3-136, gnl|rheMac2|chrX (152396719-152396526) | |
| 3-136, gnl|rn3|chrX (160450681-160450488) | |
| 3-136, gnl|tetNig1|chrUn_random (109397591-109397771) | |
| 3-136, gnl|xenTro1|scaffold_257 (730613-730807) | |
| 257-417, gnl|bosTau2|chr22 (31817812-31817972) | |
| 257-417, gnl|canFam2|chr20 (35425582-35425389) | |
| 257-417, gnl|danRer3|chrUn (92106296-92106134) | |
| 257-417, gnl|dasNov1|scaffold_3292 (38392-38582) | |
| 257-417, gnl|echTel1|scaffold_314211 (9242-9054) | |
| 257-417, gnl|fr1|chrUn (177078558-177078396) | |
| 257-417, gnl|galGal2|chr12 (8967727-8967919) | |
| 257-417, gnl|hg17|chr3 (58095367-58095560) | |
| 257-417, gnl|Hg17|chr3 (58095380-58095540) | |
| 257-417, gnl|loxAfr1|scaffold_23064 (32722-32915) | |
| 257-417, gnl|mm7|chr14 (5726004-5726198) | |
| 257-417, gnl|Mm7|chr14 (5726017-5726177) | |
| 257-417, gnl|monDom2|scaffold_5 (3001142-3001323) | |
| 257-417, gnl|oryCun1|scaffold_207772 (241388-241581) | |
| 257-417, gnl|panTro1|chr2 (59846926-59847120) | |
| 257-417, gnl|rheMac2|chr2 (78257716-78257523) | |
| 257-417, gnl|rn3|chr15 (18985147-18984953) | |
| 257-417, gnl|tetNig1|chrUn_random (11657193-11657332) | |
| 257-417, gnl|xenTro1|scaffold_80 (2204878-2205058) | |
| 604-845, gnl|bosTau2|chr22 (31821426-31821667) | |
| 604-845, gnl|Hg17|chr3 (58099046-58099287) | |
| 604-845, gnl|Mm7|chr14 (5729180-5729421) | |
| 1053-1195, gnl|bosTau2|chr4 (50488635-50488493) | |
| 1053-1195, gnl|canFam2|chr14 (10757168-10757008) | |
| 1053-1195, gnl|danRer3|chrUn (92105055-92104907) | |
| 1053-1195, gnl|dasNov1|scaffold_1198 (36700-36541) | |
| 1053-1195, gnl|echTel1|scaffold_320172 (40110-39953) | |
| 1053-1195, gnl|fr1|chrUn (177077316-177077169) | |
| 1053-1195, gnl|galGal2|chr12 (8973923-8974080) | |
| 1053-1195, gnl|hg17|chr7 (128084798-128084958) | |
| 1053-1195, gnl|Hg17|chr7 (128084807-128084949) | |
| 1053-1195, gnl|loxAfr1|scaffold_145956 (4760-4920) | |
| 1053-1195, gnl|mm7|chr6 (29385756-29385916) | |
| 1053-1195, gnl|Mm7|chr6 (29385765-29385907) | |
| 1053-1195, gnl|monDom2|scaffold_22 (15735785-15735623) | |
| 1053-1195, gnl|oryCun1|scaffold_111430 (3610-3770) | |
| 1053-1195, gnl|panTro1|chr6 (130476432-130476592) | |
| 1053-1195, gnl|rheMac2|chr3 (166180430-166180590) | |
| 1053-1195, gnl|rn3|chr4 (56591703-56591863) | |
| 1053-1195, gnl|tetNig1|chr13 (9991402-9991555) | |
| 1053-1195, gnl|xenTro1|scaffold_20 (3264073-3264224) | |
| 1284-1501, gnl|bosTau2|chrX (14342402-14342185) | |
| 1284-1501, gnl|Hg17|chrX (153099077-153098860) | |
| 1284-1501, gnl|Mm7|chrX (69611902-69611685) | |
| 1323-1499, gnl|bosTau2|chr22 (31830369-31830545) | |
| 1323-1499, gnl|Hg17|chr3 (58107586-58107762) | |
| 1323-1499, gnl|Mm7|chr14 (5737418-5737594) | |
| 1850-2017, gnl|bosTau2|chr22 (31832824-31832991) | |
| 1850-2017, gnl|canFam2|chr20 (35411195-35411013) | |
| 1850-2017, gnl|danRer3|chrUn (92103793-92103632) | |
| 1850-2017, gnl|dasNov1|scaffold_3292 (49205-49387) | |
| 1850-2017, gnl|echTel1|scaffold_266275 (4495-4657) | |
| 1850-2017, gnl|fr1|chrUn (221846199-221846363) | |
| 1850-2017, gnl|galGal2|chr12 (8977808-8977995) | |
| 1850-2017, gnl|hg17|chr3 (58110595-58110777) | |
| 1850-2017, gnl|Hg17|chr3 (58110603-58110770) | |
| 1850-2017, gnl|loxAfr1|scaffold_282 (146211-146386) | |
| 1850-2017, gnl|mm7|chr14 (5740821-5740995) | |
| 1850-2017, gnl|Mm7|chr14 (5740822-5740989) | |
| 1850-2017, gnl|monDom2|scaffold_5 (3014551-3014730) | |
| 1850-2017, gnl|oryCun1|scaffold_207772 (256339-256521) | |
| 1850-2017, gnl|panTro1|chr2 (59862131-59862313) | |
| 1850-2017, gnl|rheMac2|chr2 (78242791-78242609) | |
| 1850-2017, gnl|rn3|chr15 (18970142-18969967) | |
| 1850-2017, gnl|tetNig1|chrUn_random (11660746-11660910) | |
| 1850-2017, gnl|xenTro1|scaffold_80 (2216607-2216791) | |
| 2139-2411, gnl|bosTau2|chr22 (31835873-31836145) | |
| 2139-2411, gnl|Hg17|chr3 (58114141-58114413) | |
| 2139-2411, gnl|Mm7|chr14 (5743786-5744058) | |
| 2438-2599, gnl|bosTau2|chr4 (50488025-50487864) | |
| 2438-2599, gnl|canFam2|chr14 (10756533-10756345) | |
| 2438-2599, gnl|danRer3|chrUn (92104618-92104433) | |
| 2438-2599, gnl|dasNov1|scaffold_1198 (36091-35901) | |
| 2438-2599, gnl|echTel1|scaffold_320172 (39606-39409) | |
| 2438-2599, gnl|fr1|chrUn (177076880-177076693) | |
| 2438-2599, gnl|galGal2|chr12 (8976234-8976411) | |
| 2438-2599, gnl|hg17|chr7 (128085451-128085641) | |
| 2438-2599, gnl|Hg17|chr7 (128085455-128085616) | |
| 2438-2599, gnl|loxAfr1|scaffold_282 (143360-143550) | |
| 2438-2599, gnl|mm7|chr6 (29386399-29386589) | |
| 2438-2599, gnl|Mm7|chr6 (29386403-29386564) | |
| 2438-2599, gnl|monDom2|scaffold_22 (15735046-15734861) | |
| 2438-2599, gnl|oryCun1|scaffold_111430 (4233-4422) | |
| 2438-2599, gnl|panTro1|chr6 (130477085-130477275) | |
| 2438-2599, gnl|rheMac2|chr3 (166181083-166181273) | |
| 2438-2599, gnl|rn3|chr4 (56592332-56592522) | |
| 2438-2599, gnl|tetNig1|chr13 (9991827-9992012) | |
| 2438-2599, gnl|xenTro1|scaffold_20 (3264908-3265090) | |
| 2655-2799, gnl|bosTau2|chr22 (31841582-31841727) | |
| 2655-2799, gnl|Hg17|chr3 (58120313-58120478) | |
| 2655-2799, gnl|Mm7|chr14 (5749112-5749267) | |
| 2968-3194, gnl|bosTau2|chr22 (31848898-31849124) | |
| 2968-3194, gnl|Hg17|chr3 (58129204-58129430) | |
| 2968-3194, gnl|Mm7|chr14 (5755865-5756091) | |
| 3391-3577, gnl|bosTau2|chr22 (31851301-31851487) | |
| 3391-3577, gnl|canFam2|chr20 (35394383-35394180) | |
| 3391-3577, gnl|canFam2|chr20 (35394388-35394192) | |
| 3391-3577, gnl|danRer3|chr4 (9125348-9125153) | |
| 3391-3577, gnl|danRer3|chrUn (92099374-92099184) | |
| 3391-3577, gnl|dasNov1|scaffold_3292 (68806-68996) | |
| 3391-3577, gnl|dasNov1|scaffold_3292 (68801-68997) | |
| 3391-3577, gnl|echTel1|scaffold_297521 (10068-10262) | |
| 3391-3577, gnl|echTel1|scaffold_297521 (10061-10261) | |
| 3391-3577, gnl|fr1|chrUn (269465606-269465418) | |
| 3391-3577, gnl|fr1|chrUn (221850715-221850911) | |
| 3391-3577, gnl|galGal2|chr12 (8986417-8986607) | |
| 3391-3577, gnl|galGal2|chr12 (8986414-8986607) | |
| 3391-3577, gnl|hg17|chr16 (31084563-31084778) | |
| 3391-3577, gnl|hg17|chr3 (58131338-58131534) | |
| 3391-3577, gnl|Hg17|chr3 (58131339-58131525) | |
| 3391-3577, gnl|loxAfr1|scaffold_23064 (65111-65314) | |
| 3391-3577, gnl|loxAfr1|scaffold_23064 (65106-65302) | |
| 3391-3577, gnl|mm7|chr14 (5760381-5760570) | |
| 3391-3577, gnl|mm7|chr14 (5760374-5760570) | |
| 3391-3577, gnl|Mm7|chr14 (5760375-5760561) | |
| 3391-3577, gnl|monDom2|scaffold_5 (3033340-3033527) | |
| 3391-3577, gnl|monDom2|scaffold_5 (3033335-3033527) | |
| 3391-3577, gnl|oryCun1|scaffold_201170 (60188-59995) | |
| 3391-3577, gnl|oryCun1|scaffold_62140 (548-363) | |
| 3391-3577, gnl|panTro1|chr18 (31879956-31880171) | |
| 3391-3577, gnl|panTro1|chr2 (59882834-59883030) | |
| 3391-3577, gnl|rheMac2|chr2 (78221363-78221167) | |
| 3391-3577, gnl|rheMac2|chr20 (29265430-29265645) | |
| 3391-3577, gnl|rn3|chr15 (18950212-18950023) | |
| 3391-3577, gnl|rn3|chr15 (18950219-18950023) | |
| 3391-3577, gnl|tetNig1|chrUn_random (109389673-109389498) | |
| 3391-3577, gnl|tetNig1|chrUn_random (11664776-11664968) | |
| 3391-3577, gnl|xenTro1|scaffold_80 (2229213-2229433) | |
| 3391-3577, gnl|xenTro1|scaffold_80 (2229208-2229400) |
| Aligned organism(s): 148 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-136, gnl|bosTau2|chrX (14351679-14351546) | |
| 3-136, gnl|canFam2|chrX (125116516-125116323) | |
| 3-136, gnl|danRer3|chr23 (26253359-26253171) | |
| 3-136, gnl|dasNov1|scaffold_1198 (39720-39909) | |
| 3-136, gnl|echTel1|scaffold_318257 (39032-39223) | |
| 3-136, gnl|fr1|chrUn (177078963-177079144) | |
| 3-136, gnl|galGal2|chr12 (8966317-8966130) | |
| 3-136, gnl|hg17|chrX (153108195-153108388) | |
| 3-136, gnl|Hg17|chrX (153108331-153108198) | |
| 3-136, gnl|loxAfr1|scaffold_56236 (7844-8032) | |
| 3-136, gnl|mm7|chrX (69621249-69621442) | |
| 3-136, gnl|Mm7|chrX (69621385-69621252) | |
| 3-136, gnl|monDom2|scaffold_197 (121205-121018) | |
| 3-136, gnl|oryCun1|scaffold_201170 (88789-88597) | |
| 3-136, gnl|panTro1|chrX (158432589-158432396) | |
| 3-136, gnl|rheMac2|chrX (152396719-152396526) | |
| 3-136, gnl|rn3|chrX (160450681-160450488) | |
| 3-136, gnl|tetNig1|chrUn_random (109397591-109397771) | |
| 3-136, gnl|xenTro1|scaffold_257 (730613-730807) | |
| 257-417, gnl|bosTau2|chr22 (31817812-31817972) | |
| 257-417, gnl|canFam2|chr20 (35425582-35425389) | |
| 257-417, gnl|danRer3|chrUn (92106296-92106134) | |
| 257-417, gnl|dasNov1|scaffold_3292 (38392-38582) | |
| 257-417, gnl|echTel1|scaffold_314211 (9242-9054) | |
| 257-417, gnl|fr1|chrUn (177078558-177078396) | |
| 257-417, gnl|galGal2|chr12 (8967727-8967919) | |
| 257-417, gnl|hg17|chr3 (58095367-58095560) | |
| 257-417, gnl|Hg17|chr3 (58095380-58095540) | |
| 257-417, gnl|loxAfr1|scaffold_23064 (32722-32915) | |
| 257-417, gnl|mm7|chr14 (5726004-5726198) | |
| 257-417, gnl|Mm7|chr14 (5726017-5726177) | |
| 257-417, gnl|monDom2|scaffold_5 (3001142-3001323) | |
| 257-417, gnl|oryCun1|scaffold_207772 (241388-241581) | |
| 257-417, gnl|panTro1|chr2 (59846926-59847120) | |
| 257-417, gnl|rheMac2|chr2 (78257716-78257523) | |
| 257-417, gnl|rn3|chr15 (18985147-18984953) | |
| 257-417, gnl|tetNig1|chrUn_random (11657193-11657332) | |
| 257-417, gnl|xenTro1|scaffold_80 (2204878-2205058) | |
| 604-845, gnl|bosTau2|chr22 (31821426-31821667) | |
| 604-845, gnl|Hg17|chr3 (58099046-58099287) | |
| 604-845, gnl|Mm7|chr14 (5729180-5729421) | |
| 1053-1195, gnl|bosTau2|chr4 (50488635-50488493) | |
| 1053-1195, gnl|canFam2|chr14 (10757168-10757008) | |
| 1053-1195, gnl|danRer3|chrUn (92105055-92104907) | |
| 1053-1195, gnl|dasNov1|scaffold_1198 (36700-36541) | |
| 1053-1195, gnl|echTel1|scaffold_320172 (40110-39953) | |
| 1053-1195, gnl|fr1|chrUn (177077316-177077169) | |
| 1053-1195, gnl|galGal2|chr12 (8973923-8974080) | |
| 1053-1195, gnl|hg17|chr7 (128084798-128084958) | |
| 1053-1195, gnl|Hg17|chr7 (128084807-128084949) | |
| 1053-1195, gnl|loxAfr1|scaffold_145956 (4760-4920) | |
| 1053-1195, gnl|mm7|chr6 (29385756-29385916) | |
| 1053-1195, gnl|Mm7|chr6 (29385765-29385907) | |
| 1053-1195, gnl|monDom2|scaffold_22 (15735785-15735623) | |
| 1053-1195, gnl|oryCun1|scaffold_111430 (3610-3770) | |
| 1053-1195, gnl|panTro1|chr6 (130476432-130476592) | |
| 1053-1195, gnl|rheMac2|chr3 (166180430-166180590) | |
| 1053-1195, gnl|rn3|chr4 (56591703-56591863) | |
| 1053-1195, gnl|tetNig1|chr13 (9991402-9991555) | |
| 1053-1195, gnl|xenTro1|scaffold_20 (3264073-3264224) | |
| 1284-1501, gnl|bosTau2|chrX (14342402-14342185) | |
| 1284-1501, gnl|Hg17|chrX (153099077-153098860) | |
| 1284-1501, gnl|Mm7|chrX (69611902-69611685) | |
| 1323-1499, gnl|bosTau2|chr22 (31830369-31830545) | |
| 1323-1499, gnl|Hg17|chr3 (58107586-58107762) | |
| 1323-1499, gnl|Mm7|chr14 (5737418-5737594) | |
| 1850-2017, gnl|bosTau2|chr22 (31832824-31832991) | |
| 1850-2017, gnl|canFam2|chr20 (35411195-35411013) | |
| 1850-2017, gnl|danRer3|chrUn (92103793-92103632) | |
| 1850-2017, gnl|dasNov1|scaffold_3292 (49205-49387) | |
| 1850-2017, gnl|echTel1|scaffold_266275 (4495-4657) | |
| 1850-2017, gnl|fr1|chrUn (221846199-221846363) | |
| 1850-2017, gnl|galGal2|chr12 (8977808-8977995) | |
| 1850-2017, gnl|hg17|chr3 (58110595-58110777) | |
| 1850-2017, gnl|Hg17|chr3 (58110603-58110770) | |
| 1850-2017, gnl|loxAfr1|scaffold_282 (146211-146386) | |
| 1850-2017, gnl|mm7|chr14 (5740821-5740995) | |
| 1850-2017, gnl|Mm7|chr14 (5740822-5740989) | |
| 1850-2017, gnl|monDom2|scaffold_5 (3014551-3014730) | |
| 1850-2017, gnl|oryCun1|scaffold_207772 (256339-256521) | |
| 1850-2017, gnl|panTro1|chr2 (59862131-59862313) | |
| 1850-2017, gnl|rheMac2|chr2 (78242791-78242609) | |
| 1850-2017, gnl|rn3|chr15 (18970142-18969967) | |
| 1850-2017, gnl|tetNig1|chrUn_random (11660746-11660910) | |
| 1850-2017, gnl|xenTro1|scaffold_80 (2216607-2216791) | |
| 2139-2411, gnl|bosTau2|chr22 (31835873-31836145) | |
| 2139-2411, gnl|Hg17|chr3 (58114141-58114413) | |
| 2139-2411, gnl|Mm7|chr14 (5743786-5744058) | |
| 2438-2599, gnl|bosTau2|chr4 (50488025-50487864) | |
| 2438-2599, gnl|canFam2|chr14 (10756533-10756345) | |
| 2438-2599, gnl|danRer3|chrUn (92104618-92104433) | |
| 2438-2599, gnl|dasNov1|scaffold_1198 (36091-35901) | |
| 2438-2599, gnl|echTel1|scaffold_320172 (39606-39409) | |
| 2438-2599, gnl|fr1|chrUn (177076880-177076693) | |
| 2438-2599, gnl|galGal2|chr12 (8976234-8976411) | |
| 2438-2599, gnl|hg17|chr7 (128085451-128085641) | |
| 2438-2599, gnl|Hg17|chr7 (128085455-128085616) | |
| 2438-2599, gnl|loxAfr1|scaffold_282 (143360-143550) | |
| 2438-2599, gnl|mm7|chr6 (29386399-29386589) | |
| 2438-2599, gnl|Mm7|chr6 (29386403-29386564) | |
| 2438-2599, gnl|monDom2|scaffold_22 (15735046-15734861) | |
| 2438-2599, gnl|oryCun1|scaffold_111430 (4233-4422) | |
| 2438-2599, gnl|panTro1|chr6 (130477085-130477275) | |
| 2438-2599, gnl|rheMac2|chr3 (166181083-166181273) | |
| 2438-2599, gnl|rn3|chr4 (56592332-56592522) | |
| 2438-2599, gnl|tetNig1|chr13 (9991827-9992012) | |
| 2438-2599, gnl|xenTro1|scaffold_20 (3264908-3265090) | |
| 2655-2799, gnl|bosTau2|chr22 (31841582-31841727) | |
| 2655-2799, gnl|Hg17|chr3 (58120313-58120478) | |
| 2655-2799, gnl|Mm7|chr14 (5749112-5749267) | |
| 2968-3194, gnl|bosTau2|chr22 (31848898-31849124) | |
| 2968-3194, gnl|Hg17|chr3 (58129204-58129430) | |
| 2968-3194, gnl|Mm7|chr14 (5755865-5756091) | |
| 3391-3577, gnl|bosTau2|chr22 (31851301-31851487) | |
| 3391-3577, gnl|canFam2|chr20 (35394383-35394180) | |
| 3391-3577, gnl|canFam2|chr20 (35394388-35394192) | |
| 3391-3577, gnl|danRer3|chr4 (9125348-9125153) | |
| 3391-3577, gnl|danRer3|chrUn (92099374-92099184) | |
| 3391-3577, gnl|dasNov1|scaffold_3292 (68806-68996) | |
| 3391-3577, gnl|dasNov1|scaffold_3292 (68801-68997) | |
| 3391-3577, gnl|echTel1|scaffold_297521 (10068-10262) | |
| 3391-3577, gnl|echTel1|scaffold_297521 (10061-10261) | |
| 3391-3577, gnl|fr1|chrUn (269465606-269465418) | |
| 3391-3577, gnl|fr1|chrUn (221850715-221850911) | |
| 3391-3577, gnl|galGal2|chr12 (8986417-8986607) | |
| 3391-3577, gnl|galGal2|chr12 (8986414-8986607) | |
| 3391-3577, gnl|hg17|chr16 (31084563-31084778) | |
| 3391-3577, gnl|hg17|chr3 (58131338-58131534) | |
| 3391-3577, gnl|Hg17|chr3 (58131339-58131525) | |
| 3391-3577, gnl|loxAfr1|scaffold_23064 (65111-65314) | |
| 3391-3577, gnl|loxAfr1|scaffold_23064 (65106-65302) | |
| 3391-3577, gnl|mm7|chr14 (5760381-5760570) | |
| 3391-3577, gnl|mm7|chr14 (5760374-5760570) | |
| 3391-3577, gnl|Mm7|chr14 (5760375-5760561) | |
| 3391-3577, gnl|monDom2|scaffold_5 (3033340-3033527) | |
| 3391-3577, gnl|monDom2|scaffold_5 (3033335-3033527) | |
| 3391-3577, gnl|oryCun1|scaffold_201170 (60188-59995) | |
| 3391-3577, gnl|oryCun1|scaffold_62140 (548-363) | |
| 3391-3577, gnl|panTro1|chr18 (31879956-31880171) | |
| 3391-3577, gnl|panTro1|chr2 (59882834-59883030) | |
| 3391-3577, gnl|rheMac2|chr2 (78221363-78221167) | |
| 3391-3577, gnl|rheMac2|chr20 (29265430-29265645) | |
| 3391-3577, gnl|rn3|chr15 (18950212-18950023) | |
| 3391-3577, gnl|rn3|chr15 (18950219-18950023) | |
| 3391-3577, gnl|tetNig1|chrUn_random (109389673-109389498) | |
| 3391-3577, gnl|tetNig1|chrUn_random (11664776-11664968) | |
| 3391-3577, gnl|xenTro1|scaffold_80 (2229213-2229433) | |
| 3391-3577, gnl|xenTro1|scaffold_80 (2229208-2229400) |
| Expressed library(ies): 23 entry(ies) | More info |
| Expressed library(ies): 23 entry(ies) | Help | Less info |
| cbr (1.91963) | |
| pla (1.73774) | |
| elu (0.770713) | |
| eru (0.60024) | |
| jca (0.45584) | |
| nmm (0.398406) | |
| ute (0.398353) | |
| nlu (0.383362) | |
| eep (0.367692) | |
| cly (0.361925) | |
| nco (0.323468) | |
| csp (0.322373) | |
| cag (0.302389) | |
| eje (0.296501) | |
| clu (0.239292) | |
| col (0.195008) | |
| nep (0.183925) | |
| sin (0.174948) | |
| fhi (0.169578) | |
| cov (0.132153) | |
| ese (0.126502) | |
| bla (0.124347) | |
| cty (0.10408) |
| Expressed library(ies): 23 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cbr (1.91963) | |
| pla (1.73774) | |
| elu (0.770713) | |
| eru (0.60024) | |
| jca (0.45584) | |
| nmm (0.398406) | |
| ute (0.398353) | |
| nlu (0.383362) | |
| eep (0.367692) | |
| cly (0.361925) | |
| nco (0.323468) | |
| csp (0.322373) | |
| cag (0.302389) | |
| eje (0.296501) | |
| clu (0.239292) | |
| col (0.195008) | |
| nep (0.183925) | |
| sin (0.174948) | |
| fhi (0.169578) | |
| cov (0.132153) | |
| ese (0.126502) | |
| bla (0.124347) | |
| cty (0.10408) |