Ss1.1-Utr1-UTR010026G06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCTGAGGCTGTGGCCGCCACAGCCGATCTGGACAGCAATCAGCTCCGGCTGGCAGCCAG TATGGCAGGGCGTGAGACGCTGGAGGAACTGGTGCGACTTCAGGGAGAGCGCGTGCGGGG CCTTAAGCAGCAGAAGGCCAGCACTGAGCAGATCGAGGAGGAGGTGGCAAAACTACTGAA ACTGAAGGCACAGCTCGGCCCTGATGAAGGGAAACATAAGTTTGTGCTCAAAACTCCCAA GGGCACGAGAGACTACAGTCCCCGGCAGATGGCCGTTCGGGAGAAGGTGTTTGACGTGAT CATCGGCTGCTTCAAGCGCCACGGTGCGGAAGTGATCGACACTCCTGTGTTTGAACTGAA GGAAACACTGACTGGAAAGTACGGGGAAGACTCTAAGCTTATCTATGACCTGAAGGACCA GGGTGGCGAGCTGCTGTCCCTCCGCTATGACCTCACTGTTCCTTTTGCGCGATACTTGGC AATGAATAAACTGACCAATATTAAACGCTACCACATAGCCAAAGTGTATCGGCGGGATAA CCCAGCAATGACCAGAGGCCGGTATCGGGAATTCTACCAGTGTGACTTTGACATTGCCGG GCAGTTTGACCCCATGATTCCCGATGCGGAGTGCCTGAAGATCATGTGTGAGATCCTGAG TTCACTCCAGATAGGCGATTTTCTGGTCAAGGTGAATGATCGGCGCATCCTGGATGGGCT GTTTGCCATCTGCGGTGTTCCTGACACCAAGTTCCGCACCATCTGCTCCTCGGTGGACAA GCTGGACAAGATGTCCTGGGAAGAAGTAAAGAATGAGATGGTGGGAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCTGAGGCTGTGGCCGCCACAGCCGATCTGGACAGCAATCAGCTCCGGCTGGCAGCCAG TATGGCAGGGCGTGAGACGCTGGAGGAACTGGTGCGACTTCAGGGAGAGCGCGTGCGGGG CCTTAAGCAGCAGAAGGCCAGCACTGAGCAGATCGAGGAGGAGGTGGCAAAACTACTGAA ACTGAAGGCACAGCTCGGCCCTGATGAAGGGAAACATAAGTTTGTGCTCAAAACTCCCAA GGGCACGAGAGACTACAGTCCCCGGCAGATGGCCGTTCGGGAGAAGGTGTTTGACGTGAT CATCGGCTGCTTCAAGCGCCACGGTGCGGAAGTGATCGACACTCCTGTGTTTGAACTGAA GGAAACACTGACTGGAAAGTACGGGGAAGACTCTAAGCTTATCTATGACCTGAAGGACCA GGGTGGCGAGCTGCTGTCCCTCCGCTATGACCTCACTGTTCCTTTTGCGCGATACTTGGC AATGAATAAACTGACCAATATTAAACGCTACCACATAGCCAAAGTGTATCGGCGGGATAA CCCAGCAATGACCAGAGGCCGGTATCGGGAATTCTACCAGTGTGACTTTGACATTGCCGG GCAGTTTGACCCCATGATTCCCGATGCGGAGTGCCTGAAGATCATGTGTGAGATCCTGAG TTCACTCCAGATAGGCGATTTTCTGGTCAAGGTGAATGATCGGCGCATCCTGGATGGGCT GTTTGCCATCTGCGGTGTTCCTGACACCAAGTTCCGCACCATCTGCTCCTCGGTGGACAA GCTGGACAAGATGTCCTGGGAAGAAGTAAAGAATGAGATGGTGGGAGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 55 entry(ies) | More info |
| Aligned organism(s): 55 entry(ies) | Help | Less info |
| 5-151, gnl|bosTau2|chr7 (30467636-30467782) | |
| 5-151, gnl|canFam2|chr2 (38692925-38693404) | |
| 5-151, gnl|dasNov1|scaffold_23651 (470-976) | |
| 5-151, gnl|echTel1|scaffold_292061 (91914-91406) | |
| 5-151, gnl|hg17|chr5 (140050730-140051215) | |
| 5-151, gnl|Hg17|chr5 (140051130-140050984) | |
| 5-151, gnl|loxAfr1|scaffold_26901 (24728-25215) | |
| 5-151, gnl|mm7|chr18 (37158987-37159440) | |
| 5-151, gnl|Mm7|chr18 (37159359-37159212) | |
| 5-151, gnl|monDom2|scaffold_6 (68121701-68121056) | |
| 5-151, gnl|oryCun1|scaffold_212741 (35692-36186) | |
| 5-151, gnl|panTro1|chr4 (146669243-146669728) | |
| 5-151, gnl|rheMac2|chr6 (137091940-137092424) | |
| 5-151, gnl|rn3|chr18 (29509344-29509793) | |
| 237-362, gnl|bosTau2|chr7 (30473580-30473704) | |
| 237-362, gnl|Hg17|chr5 (140042993-140042868) | |
| 237-362, gnl|Mm7|chr18 (37152503-37152377) | |
| 458-584, gnl|bosTau2|chr7 (30475901-30476027) | |
| 458-584, gnl|canFam2|chr2 (38682558-38682708) | |
| 458-584, gnl|danRer3|chr14 (3639214-3639371) | |
| 458-584, gnl|dasNov1|scaffold_44110 (5704-5859) | |
| 458-584, gnl|echTel1|scaffold_237844 (3466-3311) | |
| 458-584, gnl|fr1|chrUn (193328436-193328282) | |
| 458-584, gnl|galGal2|chr13 (232491-232325) | |
| 458-584, gnl|hg17|chr5 (140038763-140038918) | |
| 458-584, gnl|Hg17|chr5 (140038896-140038770) | |
| 458-584, gnl|loxAfr1|scaffold_26901 (17837-17992) | |
| 458-584, gnl|mm7|chr18 (37148451-37148606) | |
| 458-584, gnl|Mm7|chr18 (37148584-37148458) | |
| 458-584, gnl|monDom2|scaffold_6 (68124540-68124388) | |
| 458-584, gnl|oryCun1|scaffold_212741 (25231-25386) | |
| 458-584, gnl|panTro1|chr4 (146657262-146657417) | |
| 458-584, gnl|rheMac2|chr6 (137080291-137080446) | |
| 458-584, gnl|rn3|chr18 (29499763-29499918) | |
| 458-584, gnl|tetNig1|chrUn_random (103420868-103421018) | |
| 458-584, gnl|xenTro1|scaffold_336 (1064764-1064911) | |
| 690-790, gnl|bosTau2|chr7 (30476902-30477002) | |
| 690-790, gnl|canFam2|chr2 (38681525-38681636) | |
| 690-790, gnl|danRer3|chr14 (3636858-3636970) | |
| 690-790, gnl|dasNov1|scaffold_44110 (4695-4806) | |
| 690-790, gnl|echTel1|scaffold_237844 (5089-4978) | |
| 690-790, gnl|fr1|chrUn (193328813-193328707) | |
| 690-790, gnl|galGal2|chr13 (233009-232898) | |
| 690-790, gnl|hg17|chr5 (140037418-140037529) | |
| 690-790, gnl|Hg17|chr5 (140037524-140037424) | |
| 690-790, gnl|loxAfr1|scaffold_26901 (16817-16928) | |
| 690-790, gnl|mm7|chr18 (37147291-37147402) | |
| 690-790, gnl|Mm7|chr18 (37147397-37147297) | |
| 690-790, gnl|monDom2|scaffold_6 (68126432-68126321) | |
| 690-790, gnl|oryCun1|scaffold_212741 (24231-24342) | |
| 690-790, gnl|panTro1|chr4 (146655917-146656028) | |
| 690-790, gnl|rheMac2|chr6 (137097237-137097114) | |
| 690-790, gnl|rn3|chr18 (29498554-29498665) | |
| 690-790, gnl|tetNig1|chrUn_random (103420452-103420565) | |
| 690-790, gnl|xenTro1|scaffold_336 (1062244-1062352) |
| Aligned organism(s): 55 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-151, gnl|bosTau2|chr7 (30467636-30467782) | |
| 5-151, gnl|canFam2|chr2 (38692925-38693404) | |
| 5-151, gnl|dasNov1|scaffold_23651 (470-976) | |
| 5-151, gnl|echTel1|scaffold_292061 (91914-91406) | |
| 5-151, gnl|hg17|chr5 (140050730-140051215) | |
| 5-151, gnl|Hg17|chr5 (140051130-140050984) | |
| 5-151, gnl|loxAfr1|scaffold_26901 (24728-25215) | |
| 5-151, gnl|mm7|chr18 (37158987-37159440) | |
| 5-151, gnl|Mm7|chr18 (37159359-37159212) | |
| 5-151, gnl|monDom2|scaffold_6 (68121701-68121056) | |
| 5-151, gnl|oryCun1|scaffold_212741 (35692-36186) | |
| 5-151, gnl|panTro1|chr4 (146669243-146669728) | |
| 5-151, gnl|rheMac2|chr6 (137091940-137092424) | |
| 5-151, gnl|rn3|chr18 (29509344-29509793) | |
| 237-362, gnl|bosTau2|chr7 (30473580-30473704) | |
| 237-362, gnl|Hg17|chr5 (140042993-140042868) | |
| 237-362, gnl|Mm7|chr18 (37152503-37152377) | |
| 458-584, gnl|bosTau2|chr7 (30475901-30476027) | |
| 458-584, gnl|canFam2|chr2 (38682558-38682708) | |
| 458-584, gnl|danRer3|chr14 (3639214-3639371) | |
| 458-584, gnl|dasNov1|scaffold_44110 (5704-5859) | |
| 458-584, gnl|echTel1|scaffold_237844 (3466-3311) | |
| 458-584, gnl|fr1|chrUn (193328436-193328282) | |
| 458-584, gnl|galGal2|chr13 (232491-232325) | |
| 458-584, gnl|hg17|chr5 (140038763-140038918) | |
| 458-584, gnl|Hg17|chr5 (140038896-140038770) | |
| 458-584, gnl|loxAfr1|scaffold_26901 (17837-17992) | |
| 458-584, gnl|mm7|chr18 (37148451-37148606) | |
| 458-584, gnl|Mm7|chr18 (37148584-37148458) | |
| 458-584, gnl|monDom2|scaffold_6 (68124540-68124388) | |
| 458-584, gnl|oryCun1|scaffold_212741 (25231-25386) | |
| 458-584, gnl|panTro1|chr4 (146657262-146657417) | |
| 458-584, gnl|rheMac2|chr6 (137080291-137080446) | |
| 458-584, gnl|rn3|chr18 (29499763-29499918) | |
| 458-584, gnl|tetNig1|chrUn_random (103420868-103421018) | |
| 458-584, gnl|xenTro1|scaffold_336 (1064764-1064911) | |
| 690-790, gnl|bosTau2|chr7 (30476902-30477002) | |
| 690-790, gnl|canFam2|chr2 (38681525-38681636) | |
| 690-790, gnl|danRer3|chr14 (3636858-3636970) | |
| 690-790, gnl|dasNov1|scaffold_44110 (4695-4806) | |
| 690-790, gnl|echTel1|scaffold_237844 (5089-4978) | |
| 690-790, gnl|fr1|chrUn (193328813-193328707) | |
| 690-790, gnl|galGal2|chr13 (233009-232898) | |
| 690-790, gnl|hg17|chr5 (140037418-140037529) | |
| 690-790, gnl|Hg17|chr5 (140037524-140037424) | |
| 690-790, gnl|loxAfr1|scaffold_26901 (16817-16928) | |
| 690-790, gnl|mm7|chr18 (37147291-37147402) | |
| 690-790, gnl|Mm7|chr18 (37147397-37147297) | |
| 690-790, gnl|monDom2|scaffold_6 (68126432-68126321) | |
| 690-790, gnl|oryCun1|scaffold_212741 (24231-24342) | |
| 690-790, gnl|panTro1|chr4 (146655917-146656028) | |
| 690-790, gnl|rheMac2|chr6 (137097237-137097114) | |
| 690-790, gnl|rn3|chr18 (29498554-29498665) | |
| 690-790, gnl|tetNig1|chrUn_random (103420452-103420565) | |
| 690-790, gnl|xenTro1|scaffold_336 (1062244-1062352) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ece (0.229305) | |
| jca (0.11396) |