Non-Coding RNA Search

Ss1.1-Utr1-UTR010028G10.5

Sequence:


               
               ATCACTTTTCATAAAGTGAGTCTATGTATTAATGGGTGGCATCGCTGGCAGAGGTGGGGG
CTACCAGGCCAGGCTGACCTTCTAGACAATTCTTTCAGAAATGCTTTAGTCAGTGTGCAG
AAGGCACCAGAGCTCAGCATCCAGGACAACCTCCTGATCTGAATAGGTGTCCTGCAGGGG
CCAGATCTGCTGGCCAAGTTTCCCTGGGTTATATCTACCGTGCTGAATCTCAGATGTTGG
TGCTTGGATGTTTATTTTAAAGAGACTGATACCCCCCTGGGCTGTATTACTAGAAGTTGT
AATTTGTGCTTTGGTTGGCCTCTGGTCTAAAGGTGTGTCCAGTATATTAGGGATCAGAAT
CCACTGAAATGTGGCAGTATTTGGAGGTGGTAGCCAGTCACTCTGCTGAACTGGTTTTGA
CTAATGACAAACCTCTTTTTAAAAAGTTGAAAAGGAGGGGCTTGGTACAAAGGGGAATGT
GCTCTTTGAGTATCATGTAAGGAAGACATGAGACCTGAAATCATTAAATTCTTGAATCTT
AAAGTACTCTCTCCAAACCTAGCCTGTGAATCAGGTTTCACTTTGTTTTTACAAACTCAT
GGACAACCTTCCGCAGCTCTGCTCCCACCTACACTCTCAGGGCCGCAGACCCCAGGAGCC
GGGGCCGCTTCCGGGCCGCGTCAGCAGGAGGAACTACTTCCGGAGCAAATCGGGCCGCTC
CCTGTATGTGGCCATTTGCAACATGCACCAGTTTATAGACGAGGAGCCCGACTGGTTTGA
GAAGCAGTTCGTCCCCTTCCATCCTACCCCACTCCGCCACCGGGAGCCAGTCCTGGAGAA
GTTTGACTCGGGCTTGGTTTTGAACGACGTCACGGGCAAGCCAGGGCCCGAGAGCGACTT
CGGGCTCAAGGCTGAGGCCACAGGCCCCGGGGCGCTGGCTGACGCGCACTCGGAGGGCCT
GCAGTTCGGCCCCGAAGAAGAGGGGGAGGCCGGGCCCGTTGCGGGTGCAGGCTCGGTGCT
GCGGCCCTTGCTGCACACCGTGAAAGCCGCCAGCCCCTCCGACATGCCGCGGGACTCGGG
CATCTACGACTCGTCCGTGCCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATCACTTTTCATAAAGTGAGTCTATGTATTAATGGGTGGCATCGCTGGCAGAGGTGGGGG
CTACCAGGCCAGGCTGACCTTCTAGACAATTCTTTCAGAAATGCTTTAGTCAGTGTGCAG
AAGGCACCAGAGCTCAGCATCCAGGACAACCTCCTGATCTGAATAGGTGTCCTGCAGGGG
CCAGATCTGCTGGCCAAGTTTCCCTGGGTTATATCTACCGTGCTGAATCTCAGATGTTGG
TGCTTGGATGTTTATTTTAAAGAGACTGATACCCCCCTGGGCTGTATTACTAGAAGTTGT
AATTTGTGCTTTGGTTGGCCTCTGGTCTAAAGGTGTGTCCAGTATATTAGGGATCAGAAT
CCACTGAAATGTGGCAGTATTTGGAGGTGGTAGCCAGTCACTCTGCTGAACTGGTTTTGA
CTAATGACAAACCTCTTTTTAAAAAGTTGAAAAGGAGGGGCTTGGTACAAAGGGGAATGT
GCTCTTTGAGTATCATGTAAGGAAGACATGAGACCTGAAATCATTAAATTCTTGAATCTT
AAAGTACTCTCTCCAAACCTAGCCTGTGAATCAGGTTTCACTTTGTTTTTACAAACTCAT
GGACAACCTTCCGCAGCTCTGCTCCCACCTACACTCTCAGGGCCGCAGACCCCAGGAGCC
GGGGCCGCTTCCGGGCCGCGTCAGCAGGAGGAACTACTTCCGGAGCAAATCGGGCCGCTC
CCTGTATGTGGCCATTTGCAACATGCACCAGTTTATAGACGAGGAGCCCGACTGGTTTGA
GAAGCAGTTCGTCCCCTTCCATCCTACCCCACTCCGCCACCGGGAGCCAGTCCTGGAGAA
GTTTGACTCGGGCTTGGTTTTGAACGACGTCACGGGCAAGCCAGGGCCCGAGAGCGACTT
CGGGCTCAAGGCTGAGGCCACAGGCCCCGGGGCGCTGGCTGACGCGCACTCGGAGGGCCT
GCAGTTCGGCCCCGAAGAAGAGGGGGAGGCCGGGCCCGTTGCGGGTGCAGGCTCGGTGCT
GCGGCCCTTGCTGCACACCGTGAAAGCCGCCAGCCCCTCCGACATGCCGCGGGACTCGGG
CATCTACGACTCGTCCGTGCCCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61864221|ref|XP_586907.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61864221|ref|XP_586907.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-590, gnl|bosTau2|chr22 (33020153-33019571)
               

               
               2-590, gnl|Hg17|chr3 (57104887-57104402)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-590, gnl|bosTau2|chr22 (33020153-33019571)
               

               
               2-590, gnl|Hg17|chr3 (57104887-57104402)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nmm (0.132802)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)
               

               
               ecc (0.115035)

	2-590, gnl\|bosTau2\|chr22 (33020153-33019571)
	2-590, gnl\|Hg17\|chr3 (57104887-57104402)