Non-Coding RNA Search

Ss1.1-Utr1-UTR010029E01.5

Sequence:


               
               CTTAAATAAAATAGATTCAGAGAAGCTTTTAATTGAATTTTTAAAGTATTTTTCAGTCAG
CCTCAGTTGAATAGGAAAACATGAGCTTTATTATAGAAATCATAATACTGGATATGAGAT
ATAAGCTATTTTAGCTGTAGTTAAAACAATAGTACTTTGTTTTAGAAATGGAAAACAGAA
AACTTTGAGGAGCATTTAATCAATTTCCTTACTGATTTGCAGACTAACAGATGATTAAGA
ATTCTGCAAGTAATTCCATCTGGGTGACTTAACAGTTGTTAGGTTTGACAGTCAAGATCT
ACTGTGAAAGGAGCAACATTTTGGGGTTTGGGGTGGAAGGAATTTCTCAAAGAAATACAA
AGCATACTTTGCCCTTGATGTTGCAAAACCGTTGAAATAGGTGCCTTAACCTCCTTATTT
CAAAATTTACTTTTCATTTAGTGTTACAGCTCAAGTGGATTAAAAACCGACTAGTATCCA
TGAGGCTGCGGGCTGGATCCCTGCCTTACTCAGTGGGTTAAGGATCCGGTGTTGCCGTGA
GCTGTGGTATAGGTTGAAGACAGGGCTTGGATCCGGCATCACTGTGGCTGTGGTGTAGGC
TGGCAGCTACAGCTCCAAATTGACCCCTAGCCTGGGAACTTCCATGTGCTGCAGGTGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTAAATAAAATAGATTCAGAGAAGCTTTTAATTGAATTTTTAAAGTATTTTTCAGTCAG
CCTCAGTTGAATAGGAAAACATGAGCTTTATTATAGAAATCATAATACTGGATATGAGAT
ATAAGCTATTTTAGCTGTAGTTAAAACAATAGTACTTTGTTTTAGAAATGGAAAACAGAA
AACTTTGAGGAGCATTTAATCAATTTCCTTACTGATTTGCAGACTAACAGATGATTAAGA
ATTCTGCAAGTAATTCCATCTGGGTGACTTAACAGTTGTTAGGTTTGACAGTCAAGATCT
ACTGTGAAAGGAGCAACATTTTGGGGTTTGGGGTGGAAGGAATTTCTCAAAGAAATACAA
AGCATACTTTGCCCTTGATGTTGCAAAACCGTTGAAATAGGTGCCTTAACCTCCTTATTT
CAAAATTTACTTTTCATTTAGTGTTACAGCTCAAGTGGATTAAAAACCGACTAGTATCCA
TGAGGCTGCGGGCTGGATCCCTGCCTTACTCAGTGGGTTAAGGATCCGGTGTTGCCGTGA
GCTGTGGTATAGGTTGAAGACAGGGCTTGGATCCGGCATCACTGTGGCTGTGGTGTAGGC
TGGCAGCTACAGCTCCAAATTGACCCCTAGCCTGGGAACTTCCATGTGCTGCAGGTGTGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-434, gnl|bosTau2|chr14 (42764684-42765079)
               

               
               7-434, gnl|Hg17|chr8 (95873225-95873643)
               

               
               7-434, gnl|Mm7|chr4 (11191102-11190445)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-434, gnl|bosTau2|chr14 (42764684-42765079)
               

               
               7-434, gnl|Hg17|chr8 (95873225-95873643)
               

               
               7-434, gnl|Mm7|chr4 (11191102-11190445)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cst (0.140036)
               

               
               kid (0.129735)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cst (0.140036)
               

               
               kid (0.129735)

	7-434, gnl\|bosTau2\|chr14 (42764684-42765079)
	7-434, gnl\|Hg17\|chr8 (95873225-95873643)
	7-434, gnl\|Mm7\|chr4 (11191102-11190445)