Ss1.1-Utr1-UTR010031D07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCCGAGCCCAGGTGAGGCGCCGGCTGGGCTGTAGCCAGGTTTTGAAGCAGCCTCCTGAG TACCGAACAACCAGGTGGTAACTCTCGCTGTGCGGCCGTGACCAGCTCTGATTCATCCTC GCTGGCCTCAGCTACCCCTCCGCAAAGTGGGACCAGGCATCAGAGAGACCCCATGCCCGG ATCCTCGGGAGCTGACATCCGGACCCTGCGCCCGGGCAGTCCTGCCCCCCAGCAGAGCGT GTCCAGGCTGGCCTTGGAGGAGCTGGCCGAAATAGAGCTGCAGAGAGATGAGGAGGCGGC TGCTGCCCTGGGCACAGTGAGAAGGCCCTTGGTGGCGCCCTCGGCTGGCCCGGACCCTGC TCTGAGCATGAATCACCCCTTCTACGACGTGGCCAGACACGGCATCTTGCAGGTGGCAGG GGAGGACCGCCTTGGAAGACGAGTCGTCACGTTCAGCTGCTGCCGGATGCCTCCGTCCCA CGAGCTCAACCACAGGCGGCTGCTGGAGTATTTGAAGTACACGCTGGACCAGTACGTGGA GAGCGACTACATCATCGTCTATTTCCACCACGGGCTGAACAGCCGGAACAAGCCGTCGCT GGGCTGGCTCCAAAGCGCCTACAAGGAGTTTGACAGGAGGTACAAAAAGAACTTGAAGGC GCTCTATGTCGTGCACCCCACCAACTTCATCAAGGTCCTGTGGAACATCCTCAGACCCCT CATCAGTCACAAGTTTGGGAAAAAGGTCACCTATTTCAACTATCTGAGCGAGCTCCACGA ACACCTCAAATTCGACCAGCTGATCGTCCCCCCAGAAGTTCAGCGGCATGACGAGAAGCT TCGGGACCTGCATGCGGGCAGGCTGCCCCCTCCTGCCAAGACGCCACCGCCGCGGCCCCC TCTGCCCACCCAGCAGTTTGGCGTCAGCCTGCAGTACCTCAAAGACAAGAATCGAGGAGA ACTCATTCCCCCTGTGATGCGGTTCACAGTGACGTACCTGAGAGAGAGAGGACTCCGCAC TGAGGGTCTGTTCCGGAGATCGGCCAGCGTCCAGACTGTCCGAGAGATCCAGCGGCTCTA CAACCAAGGGAAGCCCGTGAACTTTGACGACTACGGGGACATCCACGTCCCTGCCGTCAT CCTGAAGACCTTCCTGCGGGAGCTGCCCCAGCCGCTGCTCACCTTCGAGGCCTACGAGCA GATTCTCGGGATCACCAGCGTGGAGAGCAGCCTGCGGGTGACCTGCTGCCGCCAGATCCT GCAGAGCCTCCCGGGGCACAACTACGCCGTCCTCAGCTACCTCATGGGCTTCCTGCACGA GGTGTCCCAGGAGAGCATTTTTAACAAAATGAACAGCTCCAACCTGGCCTGCGTCTTTGG GCTGAACTTGATCTGGCCGTCCCAGGGAGCGTCTTCCCTGAGCGCCCTCGTGCCCTTGAA CCTGTTCACCGAGCTGCTCATCGAGTACTATGGCAAGGTCTTTAGCAGCCGGCAGGCGCA GCGGGAGCTCAGCGCCGGTGGGGCCCCGGCAGACGGGCAGGGCGGCCCCTGCCCCCCAGA TGGACCCGCCGCGGGCCTCACCAGGCCTCCCATGCCTCCGCGTCCCCTGACCGTGGCCGG GAGACCCCTCTAGGGCTGGAACTGTCACGCCGAAGCCTATCCATCGATGTTTTATAAACG TGCCATTAAATGAACGTCTAGTGAAGTTTTTAGAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCCGAGCCCAGGTGAGGCGCCGGCTGGGCTGTAGCCAGGTTTTGAAGCAGCCTCCTGAG TACCGAACAACCAGGTGGTAACTCTCGCTGTGCGGCCGTGACCAGCTCTGATTCATCCTC GCTGGCCTCAGCTACCCCTCCGCAAAGTGGGACCAGGCATCAGAGAGACCCCATGCCCGG ATCCTCGGGAGCTGACATCCGGACCCTGCGCCCGGGCAGTCCTGCCCCCCAGCAGAGCGT GTCCAGGCTGGCCTTGGAGGAGCTGGCCGAAATAGAGCTGCAGAGAGATGAGGAGGCGGC TGCTGCCCTGGGCACAGTGAGAAGGCCCTTGGTGGCGCCCTCGGCTGGCCCGGACCCTGC TCTGAGCATGAATCACCCCTTCTACGACGTGGCCAGACACGGCATCTTGCAGGTGGCAGG GGAGGACCGCCTTGGAAGACGAGTCGTCACGTTCAGCTGCTGCCGGATGCCTCCGTCCCA CGAGCTCAACCACAGGCGGCTGCTGGAGTATTTGAAGTACACGCTGGACCAGTACGTGGA GAGCGACTACATCATCGTCTATTTCCACCACGGGCTGAACAGCCGGAACAAGCCGTCGCT GGGCTGGCTCCAAAGCGCCTACAAGGAGTTTGACAGGAGGTACAAAAAGAACTTGAAGGC GCTCTATGTCGTGCACCCCACCAACTTCATCAAGGTCCTGTGGAACATCCTCAGACCCCT CATCAGTCACAAGTTTGGGAAAAAGGTCACCTATTTCAACTATCTGAGCGAGCTCCACGA ACACCTCAAATTCGACCAGCTGATCGTCCCCCCAGAAGTTCAGCGGCATGACGAGAAGCT TCGGGACCTGCATGCGGGCAGGCTGCCCCCTCCTGCCAAGACGCCACCGCCGCGGCCCCC TCTGCCCACCCAGCAGTTTGGCGTCAGCCTGCAGTACCTCAAAGACAAGAATCGAGGAGA ACTCATTCCCCCTGTGATGCGGTTCACAGTGACGTACCTGAGAGAGAGAGGACTCCGCAC TGAGGGTCTGTTCCGGAGATCGGCCAGCGTCCAGACTGTCCGAGAGATCCAGCGGCTCTA CAACCAAGGGAAGCCCGTGAACTTTGACGACTACGGGGACATCCACGTCCCTGCCGTCAT CCTGAAGACCTTCCTGCGGGAGCTGCCCCAGCCGCTGCTCACCTTCGAGGCCTACGAGCA GATTCTCGGGATCACCAGCGTGGAGAGCAGCCTGCGGGTGACCTGCTGCCGCCAGATCCT GCAGAGCCTCCCGGGGCACAACTACGCCGTCCTCAGCTACCTCATGGGCTTCCTGCACGA GGTGTCCCAGGAGAGCATTTTTAACAAAATGAACAGCTCCAACCTGGCCTGCGTCTTTGG GCTGAACTTGATCTGGCCGTCCCAGGGAGCGTCTTCCCTGAGCGCCCTCGTGCCCTTGAA CCTGTTCACCGAGCTGCTCATCGAGTACTATGGCAAGGTCTTTAGCAGCCGGCAGGCGCA GCGGGAGCTCAGCGCCGGTGGGGCCCCGGCAGACGGGCAGGGCGGCCCCTGCCCCCCAGA TGGACCCGCCGCGGGCCTCACCAGGCCTCCCATGCCTCCGCGTCCCCTGACCGTGGCCGG GAGACCCCTCTAGGGCTGGAACTGTCACGCCGAAGCCTATCCATCGATGTTTTATAAACG TGCCATTAAATGAACGTCTAGTGAAGTTTTTAGAGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 91 entry(ies) | More info |
| Aligned organism(s): 91 entry(ies) | Help | Less info |
| 274-424, gnl|bosTau2|chr5 (72714492-72714654) | |
| 274-424, gnl|canFam2|chr10 (24190764-24190471) | |
| 274-424, gnl|echTel1|scaffold_203291 (2678-2956) | |
| 274-424, gnl|hg17|chr22 (43502846-43503160) | |
| 274-424, gnl|Hg17|chr22 (43502872-43503028) | |
| 274-424, gnl|mm7|chr15 (84815186-84815451) | |
| 274-424, gnl|Mm7|chr15 (84815215-84815355) | |
| 274-424, gnl|panTro1|chr23 (43818024-43818338) | |
| 274-424, gnl|rheMac2|chr10 (88781098-88781390) | |
| 274-424, gnl|rn3|chr7 (122777604-122777889) | |
| 508-641, gnl|bosTau2|chr15 (48449442-48449309) | |
| 508-641, gnl|canFam2|chr18 (45861466-45861292) | |
| 508-641, gnl|danRer3|chr7 (28993895-28993752) | |
| 508-641, gnl|dasNov1|scaffold_31799 (7853-7693) | |
| 508-641, gnl|echTel1|scaffold_318661 (51662-51501) | |
| 508-641, gnl|fr1|chrUn (266812878-266813037) | |
| 508-641, gnl|galGal2|chr5 (20757246-20757100) | |
| 508-641, gnl|hg17|chr11 (46660159-46660318) | |
| 508-641, gnl|Hg17|chr11 (46660308-46660175) | |
| 508-641, gnl|loxAfr1|scaffold_80 (23717-23557) | |
| 508-641, gnl|mm7|chr2 (91519064-91518905) | |
| 508-641, gnl|Mm7|chr2 (91518913-91519046) | |
| 508-641, gnl|monDom2|scaffold_33 (12648840-12648993) | |
| 508-641, gnl|oryCun1|scaffold_210921 (58450-58291) | |
| 508-641, gnl|panTro1|chr9 (47178870-47179029) | |
| 508-641, gnl|rheMac2|chr14 (25438325-25438166) | |
| 508-641, gnl|rn3|chr3 (75945180-75945021) | |
| 508-641, gnl|tetNig1|chr3 (7321044-7321184) | |
| 508-641, gnl|xenTro1|scaffold_76 (2176482-2176636) | |
| 725-826, gnl|bosTau2|chr5 (72732888-72732989) | |
| 725-826, gnl|canFam2|chr10 (24170858-24170728) | |
| 725-826, gnl|danRer3|chr7 (28995709-28995845) | |
| 725-826, gnl|dasNov1|scaffold_13310 (8806-8935) | |
| 725-826, gnl|echTel1|scaffold_199531 (1824-1702) | |
| 725-826, gnl|fr1|chrUn (266812017-266811899) | |
| 725-826, gnl|galGal2|chr1 (66456160-66456290) | |
| 725-826, gnl|hg17|chr22 (43538762-43538892) | |
| 725-826, gnl|Hg17|chr22 (43538786-43538887) | |
| 725-826, gnl|loxAfr1|scaffold_193750 (619-490) | |
| 725-826, gnl|mm7|chr15 (84838633-84838763) | |
| 725-826, gnl|Mm7|chr15 (84838657-84838758) | |
| 725-826, gnl|oryCun1|scaffold_131834 (4421-4291) | |
| 725-826, gnl|panTro1|chr23 (43853466-43853596) | |
| 725-826, gnl|rheMac2|chr10 (88814354-88814484) | |
| 725-826, gnl|rn3|chr7 (122812668-122812798) | |
| 725-826, gnl|tetNig1|chr3 (7320522-7320418) | |
| 830-936, gnl|bosTau2|chr5 (72734124-72734230) | |
| 830-936, gnl|canFam2|chr10 (24169590-24169401) | |
| 830-936, gnl|dasNov1|scaffold_13310 (11524-11750) | |
| 830-936, gnl|echTel1|scaffold_199531 (1001-813) | |
| 830-936, gnl|galGal2|chr1 (66457387-66457620) | |
| 830-936, gnl|hg17|chr22 (43541874-43542108) | |
| 830-936, gnl|Hg17|chr22 (43541904-43542010) | |
| 830-936, gnl|mm7|chr15 (84839319-84839532) | |
| 830-936, gnl|Mm7|chr15 (84839345-84839451) | |
| 830-936, gnl|panTro1|chr23 (43856590-43856824) | |
| 830-936, gnl|rheMac2|chr10 (88817550-88817783) | |
| 830-936, gnl|rn3|chr7 (122813321-122813533) | |
| 1087-1218, gnl|bosTau2|chr5 (72746030-72746161) | |
| 1087-1218, gnl|canFam2|chr10 (24151365-24151206) | |
| 1087-1218, gnl|canFam2|chr10 (24151243-24151437) | |
| 1087-1218, gnl|dasNov1|scaffold_31799 (10094-10231) | |
| 1087-1218, gnl|hg17|chr1 (181064338-181064544) | |
| 1087-1218, gnl|hg17|chr22 (43565338-43565495) | |
| 1087-1218, gnl|Hg17|chr22 (43565347-43565478) | |
| 1087-1218, gnl|loxAfr1|scaffold_58000 (12692-12854) | |
| 1087-1218, gnl|loxAfr1|scaffold_58000 (12814-12476) | |
| 1087-1218, gnl|mm7|chr15 (84849411-84849568) | |
| 1087-1218, gnl|mm7|chr15 (84849533-84849369) | |
| 1087-1218, gnl|Mm7|chr15 (84849420-84849551) | |
| 1087-1218, gnl|oryCun1|scaffold_210921 (61033-61142) | |
| 1087-1218, gnl|panTro1|chr1 (163630014-163630220) | |
| 1087-1218, gnl|panTro1|chr23 (43880014-43880171) | |
| 1087-1218, gnl|rheMac2|chr1 (186300204-186299998) | |
| 1087-1218, gnl|rheMac2|chr10 (88840174-88840331) | |
| 1087-1218, gnl|rn3|chr7 (122823817-122823974) | |
| 1087-1218, gnl|rn3|chr7 (122823939-122823766) | |
| 1087-1218, gnl|tetNig1|chrUn_random (134518147-134517998) | |
| 1320-1505, gnl|bosTau2|chr5 (72750729-72750913) | |
| 1320-1505, gnl|canFam2|chr10 (24144749-24144532) | |
| 1320-1505, gnl|dasNov1|scaffold_94283 (5384-5123) | |
| 1320-1505, gnl|echTel1|scaffold_159153 (3499-3257) | |
| 1320-1505, gnl|galGal2|chr1 (66490220-66490509) | |
| 1320-1505, gnl|hg17|chr22 (43578600-43578878) | |
| 1320-1505, gnl|Hg17|chr22 (43578690-43578886) | |
| 1320-1505, gnl|mm7|chr15 (84854066-84854288) | |
| 1320-1505, gnl|Mm7|chr15 (84854100-84854284) | |
| 1320-1505, gnl|monDom2|scaffold_253 (111038-110787) | |
| 1320-1505, gnl|panTro1|chr23 (43889104-43889337) | |
| 1320-1505, gnl|rheMac2|chr10 (88852043-88852276) | |
| 1320-1505, gnl|rn3|chr7 (122828168-122828426) |
| Aligned organism(s): 91 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 274-424, gnl|bosTau2|chr5 (72714492-72714654) | |
| 274-424, gnl|canFam2|chr10 (24190764-24190471) | |
| 274-424, gnl|echTel1|scaffold_203291 (2678-2956) | |
| 274-424, gnl|hg17|chr22 (43502846-43503160) | |
| 274-424, gnl|Hg17|chr22 (43502872-43503028) | |
| 274-424, gnl|mm7|chr15 (84815186-84815451) | |
| 274-424, gnl|Mm7|chr15 (84815215-84815355) | |
| 274-424, gnl|panTro1|chr23 (43818024-43818338) | |
| 274-424, gnl|rheMac2|chr10 (88781098-88781390) | |
| 274-424, gnl|rn3|chr7 (122777604-122777889) | |
| 508-641, gnl|bosTau2|chr15 (48449442-48449309) | |
| 508-641, gnl|canFam2|chr18 (45861466-45861292) | |
| 508-641, gnl|danRer3|chr7 (28993895-28993752) | |
| 508-641, gnl|dasNov1|scaffold_31799 (7853-7693) | |
| 508-641, gnl|echTel1|scaffold_318661 (51662-51501) | |
| 508-641, gnl|fr1|chrUn (266812878-266813037) | |
| 508-641, gnl|galGal2|chr5 (20757246-20757100) | |
| 508-641, gnl|hg17|chr11 (46660159-46660318) | |
| 508-641, gnl|Hg17|chr11 (46660308-46660175) | |
| 508-641, gnl|loxAfr1|scaffold_80 (23717-23557) | |
| 508-641, gnl|mm7|chr2 (91519064-91518905) | |
| 508-641, gnl|Mm7|chr2 (91518913-91519046) | |
| 508-641, gnl|monDom2|scaffold_33 (12648840-12648993) | |
| 508-641, gnl|oryCun1|scaffold_210921 (58450-58291) | |
| 508-641, gnl|panTro1|chr9 (47178870-47179029) | |
| 508-641, gnl|rheMac2|chr14 (25438325-25438166) | |
| 508-641, gnl|rn3|chr3 (75945180-75945021) | |
| 508-641, gnl|tetNig1|chr3 (7321044-7321184) | |
| 508-641, gnl|xenTro1|scaffold_76 (2176482-2176636) | |
| 725-826, gnl|bosTau2|chr5 (72732888-72732989) | |
| 725-826, gnl|canFam2|chr10 (24170858-24170728) | |
| 725-826, gnl|danRer3|chr7 (28995709-28995845) | |
| 725-826, gnl|dasNov1|scaffold_13310 (8806-8935) | |
| 725-826, gnl|echTel1|scaffold_199531 (1824-1702) | |
| 725-826, gnl|fr1|chrUn (266812017-266811899) | |
| 725-826, gnl|galGal2|chr1 (66456160-66456290) | |
| 725-826, gnl|hg17|chr22 (43538762-43538892) | |
| 725-826, gnl|Hg17|chr22 (43538786-43538887) | |
| 725-826, gnl|loxAfr1|scaffold_193750 (619-490) | |
| 725-826, gnl|mm7|chr15 (84838633-84838763) | |
| 725-826, gnl|Mm7|chr15 (84838657-84838758) | |
| 725-826, gnl|oryCun1|scaffold_131834 (4421-4291) | |
| 725-826, gnl|panTro1|chr23 (43853466-43853596) | |
| 725-826, gnl|rheMac2|chr10 (88814354-88814484) | |
| 725-826, gnl|rn3|chr7 (122812668-122812798) | |
| 725-826, gnl|tetNig1|chr3 (7320522-7320418) | |
| 830-936, gnl|bosTau2|chr5 (72734124-72734230) | |
| 830-936, gnl|canFam2|chr10 (24169590-24169401) | |
| 830-936, gnl|dasNov1|scaffold_13310 (11524-11750) | |
| 830-936, gnl|echTel1|scaffold_199531 (1001-813) | |
| 830-936, gnl|galGal2|chr1 (66457387-66457620) | |
| 830-936, gnl|hg17|chr22 (43541874-43542108) | |
| 830-936, gnl|Hg17|chr22 (43541904-43542010) | |
| 830-936, gnl|mm7|chr15 (84839319-84839532) | |
| 830-936, gnl|Mm7|chr15 (84839345-84839451) | |
| 830-936, gnl|panTro1|chr23 (43856590-43856824) | |
| 830-936, gnl|rheMac2|chr10 (88817550-88817783) | |
| 830-936, gnl|rn3|chr7 (122813321-122813533) | |
| 1087-1218, gnl|bosTau2|chr5 (72746030-72746161) | |
| 1087-1218, gnl|canFam2|chr10 (24151365-24151206) | |
| 1087-1218, gnl|canFam2|chr10 (24151243-24151437) | |
| 1087-1218, gnl|dasNov1|scaffold_31799 (10094-10231) | |
| 1087-1218, gnl|hg17|chr1 (181064338-181064544) | |
| 1087-1218, gnl|hg17|chr22 (43565338-43565495) | |
| 1087-1218, gnl|Hg17|chr22 (43565347-43565478) | |
| 1087-1218, gnl|loxAfr1|scaffold_58000 (12692-12854) | |
| 1087-1218, gnl|loxAfr1|scaffold_58000 (12814-12476) | |
| 1087-1218, gnl|mm7|chr15 (84849411-84849568) | |
| 1087-1218, gnl|mm7|chr15 (84849533-84849369) | |
| 1087-1218, gnl|Mm7|chr15 (84849420-84849551) | |
| 1087-1218, gnl|oryCun1|scaffold_210921 (61033-61142) | |
| 1087-1218, gnl|panTro1|chr1 (163630014-163630220) | |
| 1087-1218, gnl|panTro1|chr23 (43880014-43880171) | |
| 1087-1218, gnl|rheMac2|chr1 (186300204-186299998) | |
| 1087-1218, gnl|rheMac2|chr10 (88840174-88840331) | |
| 1087-1218, gnl|rn3|chr7 (122823817-122823974) | |
| 1087-1218, gnl|rn3|chr7 (122823939-122823766) | |
| 1087-1218, gnl|tetNig1|chrUn_random (134518147-134517998) | |
| 1320-1505, gnl|bosTau2|chr5 (72750729-72750913) | |
| 1320-1505, gnl|canFam2|chr10 (24144749-24144532) | |
| 1320-1505, gnl|dasNov1|scaffold_94283 (5384-5123) | |
| 1320-1505, gnl|echTel1|scaffold_159153 (3499-3257) | |
| 1320-1505, gnl|galGal2|chr1 (66490220-66490509) | |
| 1320-1505, gnl|hg17|chr22 (43578600-43578878) | |
| 1320-1505, gnl|Hg17|chr22 (43578690-43578886) | |
| 1320-1505, gnl|mm7|chr15 (84854066-84854288) | |
| 1320-1505, gnl|Mm7|chr15 (84854100-84854284) | |
| 1320-1505, gnl|monDom2|scaffold_253 (111038-110787) | |
| 1320-1505, gnl|panTro1|chr23 (43889104-43889337) | |
| 1320-1505, gnl|rheMac2|chr10 (88852043-88852276) | |
| 1320-1505, gnl|rn3|chr7 (122828168-122828426) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.478583) | |
| cag (0.151194) | |
| cly (0.120642) |