Ss1.1-Utr1-UTR010031E10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAAAAGCTGATTAGCAAAGCACAGGAAACCCCAGACCCCAAGACTCCCCAAATCATTCCA GGAGCTGGGCCGCGAAGAGGCAGAAGCCTCTGGACCTGTCTCTGGAGCCCTGAGATAGGA GCGCCATGGAGAAGTTTCGGACGGTGCTGGACCTGCACCTCAAGCATCACAGCGCGCTGG GCTACGGCCTGGTGAGCCTGCTGACCGCTGGCGGGGAGCGCATCTTCTCCACCGCGGTGT TCCAGTGCCCGTGCAACGCCGCCTGGAACCTGCCCTACGGTCTGGTCTTCCTGCTGGTGC CGGCGCTGGCGCTCTTCCTGCTGGGCTACGTGCTGAACGCGCGCACCTGGCGCCTGCTGA CCGGCTGCTGCGCCCGGCCGGGCTGCGGCGGGGGGCTGCGGACCTTTGTGGTGTGCGCGC AGCTCAGCGCGGCCGCCGCGGTTGCACCGCTCACTTGGGTGGCGGTGGCGCTGCTGGGGG GCACCTTCTACGAGTGCGCGGCTAGCGGGAGCGCGTTCCAGGCGCGGCGCCTGTGTCCCG GCCGCGACTCCCGCTGCGAGGTCCAGATGCCGCTGGTGCCCTGCGGGCAAGCCCAGGTGC CCGAGGTGCAGGAGTTGCACAAGGAGCTCAAAGCCCAGTCGCAGGTGCTGGGCTGGGTCC TGATAGCAGTTGTTATGATCGTCCTCCTGCTTTGTACATCCGTCACCCGATGCCTATCTC CAGTTAGTTTCCTGCAGCTGAAATTTTGGAAAATCTATTTGGAACAGGAGCAGCAGATCC TTAAAAATCAAGCCACAGAGCATGCAGCTGAATTGGCCAAAGAAAATATCCGATGTTTCT TTGAGTCCTCACATCCAAAGGAATGCAACACTCCAAGCATTAAAGACTGGCAGCAGATTT CATCGCTATACACTTACAATCCAAAGGAACAGTATTACAGCATGTTGCACAAATATGTTA ACAGAAAAGAGAAGAATCAGAGTATCAGATCTTCCCAAGGAGATGCAATGGTTCCTATTT TTGGCTTTGTAGATTCCACTGGTATGAACACTACTCCTAGTTTATGACCTTATTAATGAA TGAGAAAAAAGTTACTTTGAGTTATTGATTCATTAAAAAGTAAGCATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAAAAGCTGATTAGCAAAGCACAGGAAACCCCAGACCCCAAGACTCCCCAAATCATTCCA GGAGCTGGGCCGCGAAGAGGCAGAAGCCTCTGGACCTGTCTCTGGAGCCCTGAGATAGGA GCGCCATGGAGAAGTTTCGGACGGTGCTGGACCTGCACCTCAAGCATCACAGCGCGCTGG GCTACGGCCTGGTGAGCCTGCTGACCGCTGGCGGGGAGCGCATCTTCTCCACCGCGGTGT TCCAGTGCCCGTGCAACGCCGCCTGGAACCTGCCCTACGGTCTGGTCTTCCTGCTGGTGC CGGCGCTGGCGCTCTTCCTGCTGGGCTACGTGCTGAACGCGCGCACCTGGCGCCTGCTGA CCGGCTGCTGCGCCCGGCCGGGCTGCGGCGGGGGGCTGCGGACCTTTGTGGTGTGCGCGC AGCTCAGCGCGGCCGCCGCGGTTGCACCGCTCACTTGGGTGGCGGTGGCGCTGCTGGGGG GCACCTTCTACGAGTGCGCGGCTAGCGGGAGCGCGTTCCAGGCGCGGCGCCTGTGTCCCG GCCGCGACTCCCGCTGCGAGGTCCAGATGCCGCTGGTGCCCTGCGGGCAAGCCCAGGTGC CCGAGGTGCAGGAGTTGCACAAGGAGCTCAAAGCCCAGTCGCAGGTGCTGGGCTGGGTCC TGATAGCAGTTGTTATGATCGTCCTCCTGCTTTGTACATCCGTCACCCGATGCCTATCTC CAGTTAGTTTCCTGCAGCTGAAATTTTGGAAAATCTATTTGGAACAGGAGCAGCAGATCC TTAAAAATCAAGCCACAGAGCATGCAGCTGAATTGGCCAAAGAAAATATCCGATGTTTCT TTGAGTCCTCACATCCAAAGGAATGCAACACTCCAAGCATTAAAGACTGGCAGCAGATTT CATCGCTATACACTTACAATCCAAAGGAACAGTATTACAGCATGTTGCACAAATATGTTA ACAGAAAAGAGAAGAATCAGAGTATCAGATCTTCCCAAGGAGATGCAATGGTTCCTATTT TTGGCTTTGTAGATTCCACTGGTATGAACACTACTCCTAGTTTATGACCTTATTAATGAA TGAGAAAAAAGTTACTTTGAGTTATTGATTCATTAAAAAGTAAGCATT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 32-628, gnl|bosTau2|chr9 (16642258-16642851) | |
| 32-628, gnl|Hg17|chr6 (116889693-116890282) | |
| 32-628, gnl|Mm7|chr10 (33908557-33908063) | |
| 643-1119, gnl|bosTau2|chr9 (16644132-16644610) | |
| 643-1119, gnl|canFam2|chr1 (59945690-59946051) | |
| 643-1119, gnl|danRer3|chrUn (95668523-95668870) | |
| 643-1119, gnl|dasNov1|scaffold_7258 (87626-87988) | |
| 643-1119, gnl|echTel1|scaffold_310251 (163911-164272) | |
| 643-1119, gnl|fr1|chrUn (96445989-96445640) | |
| 643-1119, gnl|galGal2|chr3 (62260762-62260399) | |
| 643-1119, gnl|hg17|chr6 (116891108-116891469) | |
| 643-1119, gnl|Hg17|chr6 (116891137-116891611) | |
| 643-1119, gnl|loxAfr1|scaffold_9128 (31979-32324) | |
| 643-1119, gnl|mm7|chr10 (33907243-33906882) | |
| 643-1119, gnl|Mm7|chr10 (33907212-33906735) | |
| 643-1119, gnl|monDom2|scaffold_0 (101178778-101178414) | |
| 643-1119, gnl|oryCun1|scaffold_180911 (67930-67571) | |
| 643-1119, gnl|panTro1|chr5 (119283876-119284237) | |
| 643-1119, gnl|rheMac2|chr4 (147472433-147472075) | |
| 643-1119, gnl|rn3|chr20 (37690810-37691171) | |
| 643-1119, gnl|tetNig1|chrUn_random (32259454-32259769) | |
| 643-1119, gnl|xenTro1|scaffold_373 (579431-579066) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 32-628, gnl|bosTau2|chr9 (16642258-16642851) | |
| 32-628, gnl|Hg17|chr6 (116889693-116890282) | |
| 32-628, gnl|Mm7|chr10 (33908557-33908063) | |
| 643-1119, gnl|bosTau2|chr9 (16644132-16644610) | |
| 643-1119, gnl|canFam2|chr1 (59945690-59946051) | |
| 643-1119, gnl|danRer3|chrUn (95668523-95668870) | |
| 643-1119, gnl|dasNov1|scaffold_7258 (87626-87988) | |
| 643-1119, gnl|echTel1|scaffold_310251 (163911-164272) | |
| 643-1119, gnl|fr1|chrUn (96445989-96445640) | |
| 643-1119, gnl|galGal2|chr3 (62260762-62260399) | |
| 643-1119, gnl|hg17|chr6 (116891108-116891469) | |
| 643-1119, gnl|Hg17|chr6 (116891137-116891611) | |
| 643-1119, gnl|loxAfr1|scaffold_9128 (31979-32324) | |
| 643-1119, gnl|mm7|chr10 (33907243-33906882) | |
| 643-1119, gnl|Mm7|chr10 (33907212-33906735) | |
| 643-1119, gnl|monDom2|scaffold_0 (101178778-101178414) | |
| 643-1119, gnl|oryCun1|scaffold_180911 (67930-67571) | |
| 643-1119, gnl|panTro1|chr5 (119283876-119284237) | |
| 643-1119, gnl|rheMac2|chr4 (147472433-147472075) | |
| 643-1119, gnl|rn3|chr20 (37690810-37691171) | |
| 643-1119, gnl|tetNig1|chrUn_random (32259454-32259769) | |
| 643-1119, gnl|xenTro1|scaffold_373 (579431-579066) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| csp (0.161186) | |
| lin (0.145603) | |
| lnt (0.142308) | |
| spc (0.113366) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| csp (0.161186) | |
| lin (0.145603) | |
| lnt (0.142308) | |
| spc (0.113366) |