Non-Coding RNA Search

Ss1.1-Utr1-UTR010032A09.5

Sequence:


               
               TTTTCAGAAAGTGACATGGCAGTGAGTGAGATGTAGCAGTTTAAGTACCAAAATTATGAT
TTTTTTATGGTTGCTTCCTAAATGTCTGCCACACTCCAAAAGAGGAACATTTCGCTTATT
TTTCATTTACATATGTTTTCTGTTGGCACTGCAGTCAACATGGTTTTTCTAGGAGTTCCC
TAGTGGCATGGTGGTTGGGGGATCTGGCATTGTCACTACTGTGGTGGACAGGTTTGATCC
CTGGCCTGGGAACTTCCAAATGCCATGGGTTCAGCCAAAAAGAAAAACCAAAAAAAAAAA
AAAAAAAAAAAAAAATACAGCCTACCTACCCCAAGCCCAGTGGGAGCTCTGTGAATGTTT
CCTTCCTTCCCTCTGTTGAGGTCCCTGCCTCCCTACGCCCATCACCCCATGTTCTGTTCT
AGGACTTCCAGCTGGATGCTGCCACGACCTACTGCAGAGCAGCCCGGCAGCTGGTGGAGA
GGGAGAAGTACGGTGAGATCCGCCAGCTGCTCAAATGCGTCAGCGAATCGGGCATGGCGG
CCAAGAGCGACGGGGACACCATCCTGCTCAACTGCTTGGAAGCCTTCAAGCGAATCCCAC
CGCAGGAGCTGGAGGGCCTGATCCAGGCGATACACAATGATGACAACAAGGTAAGCAGAA
CTGCCTCCTTGCTGGGTGGTGCTCAGGATCAGTGCTTTGCACTTGCCTTTTCATCTTCAT
TCCTTGCTCCCCACAACGGTGCCTTGCAAAGGGCACCTCAGCCTCTTTGTTATCCAGGGG
TGGAGCTGGGACCTGTATCTGGAAGCTATCCCGCAGCACCCCATTGTCTCATGTTATTGG
CCCCCAGAAGCATCTGCAGACCGACAGAGTTGAGTTTCTCCCTGTGACTGTAGATCATGG
GCGTGCAGGTGGCCTTGGATGCATGTCACCTGCACATCTGTCCCCTGATGGCTTCTTTGT
GGGATGAACACAGCTACATCCATGCCTGTTTGCTGTTTCTTTTCAGGTTCCCATGCTTAG
TGCTATCATTAGATTTCCTCTGTGGCTCTTATGGGAGAAGTTGGGTTTTTAAAGAAGGGT
CGGCCAGGCCTCCCCACCCAGGGTCAGGATGGCTGGGCTGAGACTGGCTGGGCCCTGGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTCAGAAAGTGACATGGCAGTGAGTGAGATGTAGCAGTTTAAGTACCAAAATTATGAT
TTTTTTATGGTTGCTTCCTAAATGTCTGCCACACTCCAAAAGAGGAACATTTCGCTTATT
TTTCATTTACATATGTTTTCTGTTGGCACTGCAGTCAACATGGTTTTTCTAGGAGTTCCC
TAGTGGCATGGTGGTTGGGGGATCTGGCATTGTCACTACTGTGGTGGACAGGTTTGATCC
CTGGCCTGGGAACTTCCAAATGCCATGGGTTCAGCCAAAAAGAAAAACCAAAAAAAAAAA
AAAAAAAAAAAAAAATACAGCCTACCTACCCCAAGCCCAGTGGGAGCTCTGTGAATGTTT
CCTTCCTTCCCTCTGTTGAGGTCCCTGCCTCCCTACGCCCATCACCCCATGTTCTGTTCT
AGGACTTCCAGCTGGATGCTGCCACGACCTACTGCAGAGCAGCCCGGCAGCTGGTGGAGA
GGGAGAAGTACGGTGAGATCCGCCAGCTGCTCAAATGCGTCAGCGAATCGGGCATGGCGG
CCAAGAGCGACGGGGACACCATCCTGCTCAACTGCTTGGAAGCCTTCAAGCGAATCCCAC
CGCAGGAGCTGGAGGGCCTGATCCAGGCGATACACAATGATGACAACAAGGTAAGCAGAA
CTGCCTCCTTGCTGGGTGGTGCTCAGGATCAGTGCTTTGCACTTGCCTTTTCATCTTCAT
TCCTTGCTCCCCACAACGGTGCCTTGCAAAGGGCACCTCAGCCTCTTTGTTATCCAGGGG
TGGAGCTGGGACCTGTATCTGGAAGCTATCCCGCAGCACCCCATTGTCTCATGTTATTGG
CCCCCAGAAGCATCTGCAGACCGACAGAGTTGAGTTTCTCCCTGTGACTGTAGATCATGG
GCGTGCAGGTGGCCTTGGATGCATGTCACCTGCACATCTGTCCCCTGATGGCTTCTTTGT
GGGATGAACACAGCTACATCCATGCCTGTTTGCTGTTTCTTTTCAGGTTCCCATGCTTAG
TGCTATCATTAGATTTCCTCTGTGGCTCTTATGGGAGAAGTTGGGTTTTTAAAGAAGGGT
CGGCCAGGCCTCCCCACCCAGGGTCAGGATGGCTGGGCTGAGACTGGCTGGGCCCTGGCT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               326-606, gnl|bosTau2|chr10 (53715645-53715363)
               

               
               326-606, gnl|Hg17|chr14 (67289091-67288813)
               

               
               326-606, gnl|Mm7|chr12 (77195915-77195649)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               326-606, gnl|bosTau2|chr10 (53715645-53715363)
               

               
               326-606, gnl|Hg17|chr14 (67289091-67288813)
               

               
               326-606, gnl|Mm7|chr12 (77195915-77195649)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ece (0.229305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)

	326-606, gnl\|bosTau2\|chr10 (53715645-53715363)
	326-606, gnl\|Hg17\|chr14 (67289091-67288813)
	326-606, gnl\|Mm7\|chr12 (77195915-77195649)