Ss1.1-Utr1-UTR010033E03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCGCAGCCCCCTCCCCCTGCACGGCGCCCTCAGACTTGCGTTTCTTGCGCTTCTTGGTC TCCGGCAAGAACCCCTTTTTCTTCCGCTTCATGCTAACGGGGTTCTGCGTGGCCTCAGGG ACTTCCTTGGCATCCTTCTCTGACTTGGGGCGCTGGACCCCAAGGAGCTTCATGGCCTGC CAGTAGAGGTCGTGGAGGCGGCTGGAGCCGGTCCCGGTCGAGTGCTCCTCCTGCTGGAGC TTCTGCTGCAGCCTCGGCTGCTGGCTCTGCAGCACACCCAGGACGGCGCTCAGGTCCGTG GTCAGCTTCTCCTGGCGAATGTTCTTGAAGAGAGTGTTGAGCAGCTCCAAGGAGGACAAC TCCTTCTGGTGCTCCGACTTGGTCTCGGCCTCCCCCAGCGTCCGCAGGTTCTCGGTGACC TTCGCCAGGATCTGGCCCATCAGCTGCTCCCACTCCGGGGCCTTAAAGCACAGTCTCAGC TCCCGCGTGTGCAGGCTCTTCTGGAGCAGCAGGCAGGCCTGGGCCTGATGGCGGGGCCGA CTGTGGCTGGCTATGTGCTCGACCACGAGGGGGAGCAGGTTCTTACAGAGCATCGGGTGC CGGCAGAAGAGGCTGAGGAACATGGGAACGGTGAGCGGACTGTTGCGCTTGGTCAGGAAC GAGCTCAGCACCGCTGAGTAGATCGGGGTCACGCGGCTCAAGTCCAAGCAGGTGGCAGCC TCGCGGCCCTGGGCGCTGGCATCAGCGGCGGTGGTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCGCAGCCCCCTCCCCCTGCACGGCGCCCTCAGACTTGCGTTTCTTGCGCTTCTTGGTC TCCGGCAAGAACCCCTTTTTCTTCCGCTTCATGCTAACGGGGTTCTGCGTGGCCTCAGGG ACTTCCTTGGCATCCTTCTCTGACTTGGGGCGCTGGACCCCAAGGAGCTTCATGGCCTGC CAGTAGAGGTCGTGGAGGCGGCTGGAGCCGGTCCCGGTCGAGTGCTCCTCCTGCTGGAGC TTCTGCTGCAGCCTCGGCTGCTGGCTCTGCAGCACACCCAGGACGGCGCTCAGGTCCGTG GTCAGCTTCTCCTGGCGAATGTTCTTGAAGAGAGTGTTGAGCAGCTCCAAGGAGGACAAC TCCTTCTGGTGCTCCGACTTGGTCTCGGCCTCCCCCAGCGTCCGCAGGTTCTCGGTGACC TTCGCCAGGATCTGGCCCATCAGCTGCTCCCACTCCGGGGCCTTAAAGCACAGTCTCAGC TCCCGCGTGTGCAGGCTCTTCTGGAGCAGCAGGCAGGCCTGGGCCTGATGGCGGGGCCGA CTGTGGCTGGCTATGTGCTCGACCACGAGGGGGAGCAGGTTCTTACAGAGCATCGGGTGC CGGCAGAAGAGGCTGAGGAACATGGGAACGGTGAGCGGACTGTTGCGCTTGGTCAGGAAC GAGCTCAGCACCGCTGAGTAGATCGGGGTCACGCGGCTCAAGTCCAAGCAGGTGGCAGCC TCGCGGCCCTGGGCGCTGGCATCAGCGGCGGTGGTT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 153-310, gnl|bosTau2|chr19 (19592403-19592554) | |
| 153-310, gnl|Hg17|chr17 (4390391-4390530) | |
| 153-310, gnl|Mm7|chr11 (72532349-72532198) | |
| 411-546, gnl|bosTau2|chr19 (19593980-19594113) | |
| 411-546, gnl|Hg17|chr17 (4391828-4391955) | |
| 411-546, gnl|Mm7|chr11 (72531407-72531271) | |
| 591-721, gnl|bosTau2|chr19 (19594784-19594914) | |
| 591-721, gnl|canFam2|chr5 (33522965-33523054) | |
| 591-721, gnl|danRer3|chrUn (154247907-154247996) | |
| 591-721, gnl|dasNov1|scaffold_7770 (52348-52424) | |
| 591-721, gnl|echTel1|scaffold_295361 (10203-10114) | |
| 591-721, gnl|fr1|chrUn (196241581-196241670) | |
| 591-721, gnl|hg17|chr17 (4392653-4392742) | |
| 591-721, gnl|Hg17|chr17 (4392657-4392787) | |
| 591-721, gnl|loxAfr1|scaffold_16470 (34113-34202) | |
| 591-721, gnl|mm7|chr11 (72530757-72530668) | |
| 591-721, gnl|Mm7|chr11 (72530751-72530621) | |
| 591-721, gnl|monDom2|scaffold_378 (40838-40927) | |
| 591-721, gnl|oryCun1|scaffold_210043 (9582-9671) | |
| 591-721, gnl|panTro1|chr19 (4701148-4701237) | |
| 591-721, gnl|rheMac2|chr16 (4316928-4317017) | |
| 591-721, gnl|rn3|chr10 (59347047-59346958) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 153-310, gnl|bosTau2|chr19 (19592403-19592554) | |
| 153-310, gnl|Hg17|chr17 (4390391-4390530) | |
| 153-310, gnl|Mm7|chr11 (72532349-72532198) | |
| 411-546, gnl|bosTau2|chr19 (19593980-19594113) | |
| 411-546, gnl|Hg17|chr17 (4391828-4391955) | |
| 411-546, gnl|Mm7|chr11 (72531407-72531271) | |
| 591-721, gnl|bosTau2|chr19 (19594784-19594914) | |
| 591-721, gnl|canFam2|chr5 (33522965-33523054) | |
| 591-721, gnl|danRer3|chrUn (154247907-154247996) | |
| 591-721, gnl|dasNov1|scaffold_7770 (52348-52424) | |
| 591-721, gnl|echTel1|scaffold_295361 (10203-10114) | |
| 591-721, gnl|fr1|chrUn (196241581-196241670) | |
| 591-721, gnl|hg17|chr17 (4392653-4392742) | |
| 591-721, gnl|Hg17|chr17 (4392657-4392787) | |
| 591-721, gnl|loxAfr1|scaffold_16470 (34113-34202) | |
| 591-721, gnl|mm7|chr11 (72530757-72530668) | |
| 591-721, gnl|Mm7|chr11 (72530751-72530621) | |
| 591-721, gnl|monDom2|scaffold_378 (40838-40927) | |
| 591-721, gnl|oryCun1|scaffold_210043 (9582-9671) | |
| 591-721, gnl|panTro1|chr19 (4701148-4701237) | |
| 591-721, gnl|rheMac2|chr16 (4316928-4317017) | |
| 591-721, gnl|rn3|chr10 (59347047-59346958) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cga (0.279096) |