Ss1.1-Utr1-UTR010033H01.5
|
AAGCTCAGCGGGAGCAGAAGAGCGCGCCGAGCCGGCCATGGGCAAGTCAGCTTCCAAGCA
GTTCAATGACGAGGTCCTGAAGGCCCACAATGAGTACCGGCAGAAGCATGGTGTCCCCCC
GCTGAAGCTCTGCAAGAAGCTCAACCGGGAGGCTCAGCAGTATTCCGAGGCCCTGGCCAG
CACAAGGATCCTCAAACACAGCCCGGAGTCCAGTCGCGGCCAGTGCGGAGAGAACCTGGC
CTGGGCGTCCTACGATCAGACAGGAAAGGAAGTGGCTGATAGATGGTACAGTGAAATTAA
GAACTACAACTTCCAGCAGCCTGGCTTCACCTCCGGGACAGGACACTTCACGGCCATGGT
GTGGAAGAATACAAAGAAGATGGGAGTGGGGAAGGCGTCTGCAAGTGATGGGTCCTCCTT
CGTGGTGGCCAGATACTTCCCAGCAGGGAATGTCGTCAACCAGGGCTACTTTGAAGAAAA
CGTCCTGCCTCCGAAGAAGTAATTGGTGCAATGTAACAGGAAGGCGGCAGACCTAAGAAT
GTGGATATGAAGTGCCTAGAACAACAAAAACTCAGCTGTGTGTCTGTCCCTGGGGGTGTA
TGTGCTTGCGTATGTGATGCTGTGAGTCTGGCTCACACACTCGATTAGGCAGGTCAGCCT
GATTTCATTCTTATCAAAGGGACGAGCATCCGCAGCCTTCACTCTAGTGGTTCCCTAGAC
CGCAATTATTTGGACTTTGGGGGGAAAAAAATCCCTTTTTAAACTTTTTTTAAAAATTTT
CGAAGCCACCTTTTTTGTACTTTTCTTGCTCCGAACATCCACCCCTGGGCTTTGTGTGTT
CCACATGTTTGTGATGCTGAGACAGCGAAGTTCATTTTACGTGACCTTCATGCATTGTAA
TCTACTTTTGGTAGATGTTTAAGAATATTAAACCCTCACCGAAAGGTGACACCAACGACG
GCTTTAACCACG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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AAGCTCAGCGGGAGCAGAAGAGCGCGCCGAGCCGGCCATGGGCAAGTCAGCTTCCAAGCA
GTTCAATGACGAGGTCCTGAAGGCCCACAATGAGTACCGGCAGAAGCATGGTGTCCCCCC
GCTGAAGCTCTGCAAGAAGCTCAACCGGGAGGCTCAGCAGTATTCCGAGGCCCTGGCCAG
CACAAGGATCCTCAAACACAGCCCGGAGTCCAGTCGCGGCCAGTGCGGAGAGAACCTGGC
CTGGGCGTCCTACGATCAGACAGGAAAGGAAGTGGCTGATAGATGGTACAGTGAAATTAA
GAACTACAACTTCCAGCAGCCTGGCTTCACCTCCGGGACAGGACACTTCACGGCCATGGT
GTGGAAGAATACAAAGAAGATGGGAGTGGGGAAGGCGTCTGCAAGTGATGGGTCCTCCTT
CGTGGTGGCCAGATACTTCCCAGCAGGGAATGTCGTCAACCAGGGCTACTTTGAAGAAAA
CGTCCTGCCTCCGAAGAAGTAATTGGTGCAATGTAACAGGAAGGCGGCAGACCTAAGAAT
GTGGATATGAAGTGCCTAGAACAACAAAAACTCAGCTGTGTGTCTGTCCCTGGGGGTGTA
TGTGCTTGCGTATGTGATGCTGTGAGTCTGGCTCACACACTCGATTAGGCAGGTCAGCCT
GATTTCATTCTTATCAAAGGGACGAGCATCCGCAGCCTTCACTCTAGTGGTTCCCTAGAC
CGCAATTATTTGGACTTTGGGGGGAAAAAAATCCCTTTTTAAACTTTTTTTAAAAATTTT
CGAAGCCACCTTTTTTGTACTTTTCTTGCTCCGAACATCCACCCCTGGGCTTTGTGTGTT
CCACATGTTTGTGATGCTGAGACAGCGAAGTTCATTTTACGTGACCTTCATGCATTGTAA
TCTACTTTTGGTAGATGTTTAAGAATATTAAACCCTCACCGAAAGGTGACACCAACGACG
GCTTTAACCACG
|
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gi|61812939|ref|XP_581156.1| |
Protein identifier
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gi|61812939|ref|XP_581156.1| |
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48-161, gnl|bosTau2|chr8 (31856137-31856024) |
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48-161, gnl|canFam2|chr11 (55653108-55653241) |
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48-161, gnl|dasNov1|scaffold_112693 (4367-4478) |
|
48-161, gnl|echTel1|scaffold_316005 (5020-5118) |
|
48-161, gnl|fr1|chrUn (166454261-166454392) |
|
48-161, gnl|hg17|chr9 (36137775-36137908) |
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48-161, gnl|Hg17|chr9 (36137780-36137893) |
|
48-161, gnl|loxAfr1|scaffold_3350 (122916-122782) |
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48-161, gnl|mm7|chr4 (43981918-43982052) |
|
48-161, gnl|Mm7|chr4 (43981923-43982036) |
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48-161, gnl|oryCun1|scaffold_60989 (792-924) |
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48-161, gnl|panTro1|chr11 (36705375-36705508) |
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48-161, gnl|rheMac2|chr15 (41324151-41324018) |
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48-161, gnl|rn3|chr5 (60431339-60431473) |
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48-161, gnl|tetNig1|chr8 (7080783-7080916) |
| |
|
338-970, gnl|bosTau2|chr8 (31847139-31846510) |
|
338-970, gnl|Hg17|chr9 (36152355-36152993) |
|
338-970, gnl|Mm7|chr4 (43991273-43992046) |
| |
|
667-889, gnl|bosTau2|chr21 (26135615-26135822) |
|
667-889, gnl|Hg17|chr9 (36152689-36152911) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
48-161, gnl|bosTau2|chr8 (31856137-31856024) |
|
48-161, gnl|canFam2|chr11 (55653108-55653241) |
|
48-161, gnl|dasNov1|scaffold_112693 (4367-4478) |
|
48-161, gnl|echTel1|scaffold_316005 (5020-5118) |
|
48-161, gnl|fr1|chrUn (166454261-166454392) |
|
48-161, gnl|hg17|chr9 (36137775-36137908) |
|
48-161, gnl|Hg17|chr9 (36137780-36137893) |
|
48-161, gnl|loxAfr1|scaffold_3350 (122916-122782) |
|
48-161, gnl|mm7|chr4 (43981918-43982052) |
|
48-161, gnl|Mm7|chr4 (43981923-43982036) |
|
48-161, gnl|oryCun1|scaffold_60989 (792-924) |
|
48-161, gnl|panTro1|chr11 (36705375-36705508) |
|
48-161, gnl|rheMac2|chr15 (41324151-41324018) |
|
48-161, gnl|rn3|chr5 (60431339-60431473) |
|
48-161, gnl|tetNig1|chr8 (7080783-7080916) |
| |
|
338-970, gnl|bosTau2|chr8 (31847139-31846510) |
|
338-970, gnl|Hg17|chr9 (36152355-36152993) |
|
338-970, gnl|Mm7|chr4 (43991273-43992046) |
| |
|
667-889, gnl|bosTau2|chr21 (26135615-26135822) |
|
667-889, gnl|Hg17|chr9 (36152689-36152911) |
|
nje (0.33184) |
|
ski (0.29347) |
|
csk (0.281492) |
|
pla (0.267344) |
|
ese (0.253004) |
|
bla (0.248694) |
|
eep (0.245128) |
|
eru (0.240096) |
|
mgp (0.230681) |
|
cty (0.20816) |
|
ill (0.175593) |
|
duo (0.172801) |
|
cut (0.169924) |
|
cje (0.165235) |
|
nco (0.161734) |
|
csp (0.161186) |
|
cli (0.152812) |
|
fat (0.147427) |
|
spl (0.143184) |
|
hyp (0.142837) |
|
cov (0.132153) |
|
cly (0.120642) |
|
jca (0.11396) |
|
jej (0.0989218) |
|
nje (0.33184) |
|
ski (0.29347) |
|
csk (0.281492) |
|
pla (0.267344) |
|
ese (0.253004) |
|
bla (0.248694) |
|
eep (0.245128) |
|
eru (0.240096) |
|
mgp (0.230681) |
|
cty (0.20816) |
|
ill (0.175593) |
|
duo (0.172801) |
|
cut (0.169924) |
|
cje (0.165235) |
|
nco (0.161734) |
|
csp (0.161186) |
|
cli (0.152812) |
|
fat (0.147427) |
|
spl (0.143184) |
|
hyp (0.142837) |
|
cov (0.132153) |
|
cly (0.120642) |
|
jca (0.11396) |
|
jej (0.0989218) |
