Non-Coding RNA Search

Ss1.1-Utr1-UTR010035A07.5

Sequence:


               
               CTGGACAGAATCTCCGCAGATTCCAAAGATGCGGGTCAGGGGCCCTCAAGCCATCCTCAT
TCTGCTGTCGGGGGCCCTGGCCCTGACCGGGACCCGGGCGGGTCCCCACTCCCTGAGCTA
TTTCTACACCGCCGTGTCCCGGCCCGACCGCGGGGACTCCCGCTTCCTCACCGTCGGCTA
CGTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACGCCCCGAATCCGAGGAAAGAGCC
GCGGGCGCCGTGGATCGAACAGGAGGGGCCGGAGTATTGGGATGAGGAGACACAGATCAG
CAAGGACAACGCACAGAGATACCGAGTGGACCTGAACACCCTGCGCGGCTACTACAACCA
GAGCGAGGCCGGGTCTCACACCTTCCAGAGCATGTTTGGCTGCTACTTGGGACCAGACGG
GCTCCTCCTCCGCGGGTACAGACAGTATGGCTACGACGGCGCCGATTACATCGCCCTGAA
CGAGGACCTGCGCTCCTGGACCGCGGCGGACATGGCGGCTCAGATCACCAAGCGCAAGTG
GGAGGCGGCCAATGTGGCGGAGCGTAGGAGGAGCTACCTGCAGGGCCGGTGTGTGGAGTC
GCTCCGCAAATACCTGGAGATGGGGAAGGACACGCTGCAGCGCGCAGAGCCTCCAAAGAC
ACATGTGACCCGCCACCCCAGCTCTGACCTGGGGGTCACCTTGAGGTGCTGGGCCCTGGG
CTTCTACCCTAAGGAGATCTCCCTGACCTGGCAGCGCGAGGGCCAGGACCAGAGCCAGGA
CATGGAGCTGGTGGAGACCAGGCCCTCAGGGGATGGGACCTTCCAGAAGTGGGCGGCCCT
GGTGGTGCCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGACAGAATCTCCGCAGATTCCAAAGATGCGGGTCAGGGGCCCTCAAGCCATCCTCAT
TCTGCTGTCGGGGGCCCTGGCCCTGACCGGGACCCGGGCGGGTCCCCACTCCCTGAGCTA
TTTCTACACCGCCGTGTCCCGGCCCGACCGCGGGGACTCCCGCTTCCTCACCGTCGGCTA
CGTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACGCCCCGAATCCGAGGAAAGAGCC
GCGGGCGCCGTGGATCGAACAGGAGGGGCCGGAGTATTGGGATGAGGAGACACAGATCAG
CAAGGACAACGCACAGAGATACCGAGTGGACCTGAACACCCTGCGCGGCTACTACAACCA
GAGCGAGGCCGGGTCTCACACCTTCCAGAGCATGTTTGGCTGCTACTTGGGACCAGACGG
GCTCCTCCTCCGCGGGTACAGACAGTATGGCTACGACGGCGCCGATTACATCGCCCTGAA
CGAGGACCTGCGCTCCTGGACCGCGGCGGACATGGCGGCTCAGATCACCAAGCGCAAGTG
GGAGGCGGCCAATGTGGCGGAGCGTAGGAGGAGCTACCTGCAGGGCCGGTGTGTGGAGTC
GCTCCGCAAATACCTGGAGATGGGGAAGGACACGCTGCAGCGCGCAGAGCCTCCAAAGAC
ACATGTGACCCGCCACCCCAGCTCTGACCTGGGGGTCACCTTGAGGTGCTGGGCCCTGGG
CTTCTACCCTAAGGAGATCTCCCTGACCTGGCAGCGCGAGGGCCAGGACCAGAGCCAGGA
CATGGAGCTGGTGGAGACCAGGCCCTCAGGGGATGGGACCTTCCAGAAGTGGGCGGCCCT
GGTGGTGCCTCC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               Q68VF4_PIG

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               Q68VF4_PIG

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               100-372, gnl|bosTau2|chr23 (23096967-23096696)
               

               
               100-372, gnl|Hg17|chr6 (29903802-29904073)
               

               
               100-372, gnl|Mm7|chr17 (34516576-34516305)
               


               
               405-655, gnl|bosTau2|chr20 (36655627-36655873)
               

               
               405-655, gnl|Hg17|chr6 (31347071-31346829)
               

               
               405-655, gnl|Mm7|chr17 (32077846-32077606)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               100-372, gnl|bosTau2|chr23 (23096967-23096696)
               

               
               100-372, gnl|Hg17|chr6 (29903802-29904073)
               

               
               100-372, gnl|Mm7|chr17 (34516576-34516305)
               


               
               405-655, gnl|bosTau2|chr20 (36655627-36655873)
               

               
               405-655, gnl|Hg17|chr6 (31347071-31346829)
               

               
               405-655, gnl|Mm7|chr17 (32077846-32077606)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               csp (0.322373)
               

               
               ill (0.175593)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csp (0.322373)
               

               
               ill (0.175593)

	100-372, gnl\|bosTau2\|chr23 (23096967-23096696)
	100-372, gnl\|Hg17\|chr6 (29903802-29904073)
	100-372, gnl\|Mm7\|chr17 (34516576-34516305)

	405-655, gnl\|bosTau2\|chr20 (36655627-36655873)
	405-655, gnl\|Hg17\|chr6 (31347071-31346829)
	405-655, gnl\|Mm7\|chr17 (32077846-32077606)