Non-Coding RNA Search

Ss1.1-Utr1-UTR010035G11.5

Sequence:


               
               ACGGTGCTGACAAGATAGCGGCTGGCGGGGCTGTTGCTGCGGCGCCCGAGTGCCGGCTTC
TGCCCTACGCGCTACACAAGTGGAGCTCCTTCTCCTCCACCTACCTTCCCGAGAACATTT
TAGTGGATAAACCAAATGATCAGTCTTCAAGGTGGTCTTCAGAGAGCAACTATCCTCCCC
AGTACTTGATTCTGAAGCTTGAAAGGCCTGCTATAGTACAGAATATCACATTTGGAAAAT
ATGAGAAAACTCATGTCTGCAATTTGAAGAAATTTAAAGTCTTTGGTGGAATGAATGAAG
AAAACATGACAGAGCTATTGTCCAGTGGCTTAAAGAATGATTATAACAAAGAAACATTTA
CCTTGAAGCATAAAATTGATGAACAGATGTTTCCTTGTCGATTCATTAAAATAGTTCCAC
TCTTATCGTGGGGACCCAGCTTTAACTTTAGCATCTGGTATGTTGAACTTAGCGGCATTG
ATGATCCTGATGTAGTACAACCCTGTCTCAACTGGTACAGCAAGTACCGCGAACAGGAAG
CCATTCGCCTTTGCCTAAAACACTTTAGACAACATAACTATACAGAGGCCTTTGAATCAC
TGCAAAAGAAAACCAAGATTGCACTGGAACATCCCATGTTAACAGATCTGCATGATAAAT
TGGTATTGAAGGGTGATTTTGATGCTTGTGAAGAATTGATTGAAAAAGCTGTAAATGATG
GCTTGTTCAATCAGTATATCAGCCAACAGGAATATAAGCCACGGTGGAGTCAAATCATTC
CCAAAAGCACCAAAGGTGATGGAGAAGATAACCGACCAGGAATGAGAGGAGGCCATCAGA
TGGTTATTGATGTTCAAACAGAGACCGTTTATTTGTTTGGTGGCTGGGATGGAACACAAG
ATCTTGCTGACTTCTGGGCATACAGTGTGAAGGAGAACCAGTGGACATGTATCTCTAGAG
ACACTGAGAAAGAGAATGGTCCTAGTGCTAGATCATGTCATAAAATGTGCATTGACATTC
AGCGAAGGCAAATCTACACATTGGGGCGTTATTTGGATTCCTCTGTGAGGAACAGCAAAT
CTCTGAAAAGTGATTTCTATCGTTATGACATTGACACAAACACATGGATGTTACTCAGTG
AGGATACTGCTGCTGACGGAGGACCGAAATTGGTGTTTGATCATCAGATGTGTATGGACT
CAGAAAAACATATGATCTACACCTTTGGTGGTAGAATTTTGACATGTAATGGCAGCGTAG
ACGACAGCAGAGCCAGTGAACCACAGTTCAGTGGGTTGTTTGCTTTCAACTGTCAGTGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACGGTGCTGACAAGATAGCGGCTGGCGGGGCTGTTGCTGCGGCGCCCGAGTGCCGGCTTC
TGCCCTACGCGCTACACAAGTGGAGCTCCTTCTCCTCCACCTACCTTCCCGAGAACATTT
TAGTGGATAAACCAAATGATCAGTCTTCAAGGTGGTCTTCAGAGAGCAACTATCCTCCCC
AGTACTTGATTCTGAAGCTTGAAAGGCCTGCTATAGTACAGAATATCACATTTGGAAAAT
ATGAGAAAACTCATGTCTGCAATTTGAAGAAATTTAAAGTCTTTGGTGGAATGAATGAAG
AAAACATGACAGAGCTATTGTCCAGTGGCTTAAAGAATGATTATAACAAAGAAACATTTA
CCTTGAAGCATAAAATTGATGAACAGATGTTTCCTTGTCGATTCATTAAAATAGTTCCAC
TCTTATCGTGGGGACCCAGCTTTAACTTTAGCATCTGGTATGTTGAACTTAGCGGCATTG
ATGATCCTGATGTAGTACAACCCTGTCTCAACTGGTACAGCAAGTACCGCGAACAGGAAG
CCATTCGCCTTTGCCTAAAACACTTTAGACAACATAACTATACAGAGGCCTTTGAATCAC
TGCAAAAGAAAACCAAGATTGCACTGGAACATCCCATGTTAACAGATCTGCATGATAAAT
TGGTATTGAAGGGTGATTTTGATGCTTGTGAAGAATTGATTGAAAAAGCTGTAAATGATG
GCTTGTTCAATCAGTATATCAGCCAACAGGAATATAAGCCACGGTGGAGTCAAATCATTC
CCAAAAGCACCAAAGGTGATGGAGAAGATAACCGACCAGGAATGAGAGGAGGCCATCAGA
TGGTTATTGATGTTCAAACAGAGACCGTTTATTTGTTTGGTGGCTGGGATGGAACACAAG
ATCTTGCTGACTTCTGGGCATACAGTGTGAAGGAGAACCAGTGGACATGTATCTCTAGAG
ACACTGAGAAAGAGAATGGTCCTAGTGCTAGATCATGTCATAAAATGTGCATTGACATTC
AGCGAAGGCAAATCTACACATTGGGGCGTTATTTGGATTCCTCTGTGAGGAACAGCAAAT
CTCTGAAAAGTGATTTCTATCGTTATGACATTGACACAAACACATGGATGTTACTCAGTG
AGGATACTGCTGCTGACGGAGGACCGAAATTGGTGTTTGATCATCAGATGTGTATGGACT
CAGAAAAACATATGATCTACACCTTTGGTGGTAGAATTTTGACATGTAATGGCAGCGTAG
ACGACAGCAGAGCCAGTGAACCACAGTTCAGTGGGTTGTTTGCTTTCAACTGTCAGTGTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|50729330|ref|XP_416474.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|50729330|ref|XP_416474.1|

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               tes (0.207814)
               

               
               lin (0.145603)
               

               
               spl (0.143184)
               

               
               hlv (0.139256)
               

               
               cty (0.10408)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               lin (0.145603)
               

               
               spl (0.143184)
               

               
               hlv (0.139256)
               

               
               cty (0.10408)

	tes (0.207814)
	lin (0.145603)
	spl (0.143184)
	hlv (0.139256)
	cty (0.10408)