Non-Coding RNA Search

Ss1.1-Utr1-UTR010036D01.5

Sequence:


               
               TTCAATTAATATTTTATTGAACTTTCCAGTTTGCTCTAAACCCGTGGTTCTCAGAGGTGA
AACTACTCCATTAGGTGGAGTTTTAAAATTGTGGGGATGCTTCTTGTCAAAACTAGAAGG
GTGGTTTCTACTGGTATTCAGTCAGTAAGGGCCAAGATGCTAGATCCTACAAAGTTTTGG
TCAGTTCTAAACAATGAAGAATTATCTCATCCCAAATGTATATTGAGGGCCTGTTGAGAT
ACACAGCAAGTTAAAGCTTATACTCTCAGTGTGAATATACTTTTATTAGTGACACAATGA
GTTGAACTACTAGGTAAGTCAAATTCTAAAACAAATCCTAAAGATCTAACGAAGTGAATA
TGTTGGAATCGGAATGTCATATCAAATATTATTTGTCAGAAATGAGCCATGAGCTGCAGC
TTATGAATCTGGAGGTAAAATGATATTTCTTCAACTTGACTTTAAGTGACATGTTCCAGA
GAACAGTTCTTTGAGCACAGTTTTAATAAATGTTCATTCTAGAATAACTTTCCTTCTGAG
TTGCCTTCCACCTACCTTTTGTCTGCCATGGGGCATCTCTGACTCATTTGCCCACAGTAT
TTCTCAAAATGTGTTACTTGGAAAGGTAGTCTCATGTACTGATTCATTCAAAAGGATTCC
CTAATCAGATCAGTGTGGGAAACTCTGTATGCTGTGTGCCCCTCTGGCAGTGTTCAGTGC
CTACCGATGTATTAAAAACAGGACTGCTTCAGTGGTCACACACCAGTCTTTGGTGCCTGA
AAGACCTAAGTTAAGAGTCCCATTCTGGGGAGTTCCCATTGTGGTGCAGCAGAAACAAAT
CTGACTAGTATCCATGAGGATACAGGTTTGATCCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCAATTAATATTTTATTGAACTTTCCAGTTTGCTCTAAACCCGTGGTTCTCAGAGGTGA
AACTACTCCATTAGGTGGAGTTTTAAAATTGTGGGGATGCTTCTTGTCAAAACTAGAAGG
GTGGTTTCTACTGGTATTCAGTCAGTAAGGGCCAAGATGCTAGATCCTACAAAGTTTTGG
TCAGTTCTAAACAATGAAGAATTATCTCATCCCAAATGTATATTGAGGGCCTGTTGAGAT
ACACAGCAAGTTAAAGCTTATACTCTCAGTGTGAATATACTTTTATTAGTGACACAATGA
GTTGAACTACTAGGTAAGTCAAATTCTAAAACAAATCCTAAAGATCTAACGAAGTGAATA
TGTTGGAATCGGAATGTCATATCAAATATTATTTGTCAGAAATGAGCCATGAGCTGCAGC
TTATGAATCTGGAGGTAAAATGATATTTCTTCAACTTGACTTTAAGTGACATGTTCCAGA
GAACAGTTCTTTGAGCACAGTTTTAATAAATGTTCATTCTAGAATAACTTTCCTTCTGAG
TTGCCTTCCACCTACCTTTTGTCTGCCATGGGGCATCTCTGACTCATTTGCCCACAGTAT
TTCTCAAAATGTGTTACTTGGAAAGGTAGTCTCATGTACTGATTCATTCAAAAGGATTCC
CTAATCAGATCAGTGTGGGAAACTCTGTATGCTGTGTGCCCCTCTGGCAGTGTTCAGTGC
CTACCGATGTATTAAAAACAGGACTGCTTCAGTGGTCACACACCAGTCTTTGGTGCCTGA
AAGACCTAAGTTAAGAGTCCCATTCTGGGGAGTTCCCATTGTGGTGCAGCAGAAACAAAT
CTGACTAGTATCCATGAGGATACAGGTTTGATCCCT

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               1-286, gnl|bosTau2|chr24 (32911941-32912223)
               

               
               1-286, gnl|Hg17|chr18 (46767977-46768283)
               

               
               1-286, gnl|Mm7|chr18 (74132617-74132354)
               


               
               287-807, gnl|bosTau2|chr24 (32912331-32912858)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-286, gnl|bosTau2|chr24 (32911941-32912223)
               

               
               1-286, gnl|Hg17|chr18 (46767977-46768283)
               

               
               1-286, gnl|Mm7|chr18 (74132617-74132354)
               


               
               287-807, gnl|bosTau2|chr24 (32912331-32912858)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               thg (0.126791)
               

               
               pgl (0.118483)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               thg (0.126791)
               

               
               pgl (0.118483)

	1-286, gnl\|bosTau2\|chr24 (32911941-32912223)
	1-286, gnl\|Hg17\|chr18 (46767977-46768283)
	1-286, gnl\|Mm7\|chr18 (74132617-74132354)

	287-807, gnl\|bosTau2\|chr24 (32912331-32912858)