Non-Coding RNA Search

Ss1.1-Utr1-UTR010039A01.5

Sequence:


               
               GCGAAGCAAAACAAGGCACTGACCCTGGAATCGAAGGGAAACAGAAAAGTCTTCGTAAAA
GTCGTGCAGGGTTCACGGCTCTTCATGGCAGCCGAGGGCTAAAAGGAAAATTTAACCAAA
ACAAAATCAAGAAGCTCTTCTACTCCTTGGCGTCTTGCAGTCTGTTCAGGGTGGTGTCTG
GCAAACTGCAAATCCAGTGCACACTGGAGCCCCAAGGGCAGGGAGCGCCGGGGTGCGGCC
CTGTCCCTGGCGCCCGACCGCAGTGGAGCGCACACCCCTTTTTTGCAGACTCACAGGTTT
CCAGGCCCCGCCTCCTCCGGGCACTGCTGATCGCCGCGCTTTGGGCCCGGAATCCAGACG
TCCAGAGCCCTACGCCCTCGGTTCCCCACACTGGGCTCCAGGCGGGGCCCTCCTAGAGCA
CTGCGAGCGGCGGGGTCCGCAGAGGATCCGGGTCGGAGCCACGCAGCCTCCAGCTCCGTG
GGGCTCGGGAAGGGAGGCGGGGCGGCCGGGCCGGGGGCGGAGTCGCGGCCGCGGCCGCCG
CCGTGAGCCCGCCCCCTGCTCGCCCTCCCGGGCTAGCTGGCGCGGCCATGGAGGTCTACA
TCCCGTCCTTTCGCTACGAGGAGAGTGACCTGGAGCGGGGATACACGGTGTTTAAGATAG
AAGTGCTAATGAACGGAAGAAAACATTTTGTCGAAAAGAGGTACAGCGAATTCCATGCCC
TGCACAAAAAGCTCAAGAAATGTATTAAAACTCCAGAAATCCCTTCTAAACATGTTCGGA
ATTGGGTCCCTAAAGTCTTGGAACAACGTCGACAAGGTTTGGAAACATATCTACAGGCTG
TCATTCTAGAAAATGAAGAACTCCCCAAACTGTTTCTTGATTTCCTAAACGTGCGACATT
TGCCCTCTCTACCAAAGGCAGAGAGTTGTGGGTAAGAGTTTTTCTTTGCCTCTTGGGCAT
GTATCTTAAATAACTTTGCAGTCACCTTTGGGCCTCACCAATAATGCAGGTGGTGCCAGC
AGGGCCAGCCTGGCCACACCCATTCTTTTCAAGGCTTGGGACAGCACTAGCTCGCCCCCT
GCCTGTAGTCACGGGAATTTCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGAAGCAAAACAAGGCACTGACCCTGGAATCGAAGGGAAACAGAAAAGTCTTCGTAAAA
GTCGTGCAGGGTTCACGGCTCTTCATGGCAGCCGAGGGCTAAAAGGAAAATTTAACCAAA
ACAAAATCAAGAAGCTCTTCTACTCCTTGGCGTCTTGCAGTCTGTTCAGGGTGGTGTCTG
GCAAACTGCAAATCCAGTGCACACTGGAGCCCCAAGGGCAGGGAGCGCCGGGGTGCGGCC
CTGTCCCTGGCGCCCGACCGCAGTGGAGCGCACACCCCTTTTTTGCAGACTCACAGGTTT
CCAGGCCCCGCCTCCTCCGGGCACTGCTGATCGCCGCGCTTTGGGCCCGGAATCCAGACG
TCCAGAGCCCTACGCCCTCGGTTCCCCACACTGGGCTCCAGGCGGGGCCCTCCTAGAGCA
CTGCGAGCGGCGGGGTCCGCAGAGGATCCGGGTCGGAGCCACGCAGCCTCCAGCTCCGTG
GGGCTCGGGAAGGGAGGCGGGGCGGCCGGGCCGGGGGCGGAGTCGCGGCCGCGGCCGCCG
CCGTGAGCCCGCCCCCTGCTCGCCCTCCCGGGCTAGCTGGCGCGGCCATGGAGGTCTACA
TCCCGTCCTTTCGCTACGAGGAGAGTGACCTGGAGCGGGGATACACGGTGTTTAAGATAG
AAGTGCTAATGAACGGAAGAAAACATTTTGTCGAAAAGAGGTACAGCGAATTCCATGCCC
TGCACAAAAAGCTCAAGAAATGTATTAAAACTCCAGAAATCCCTTCTAAACATGTTCGGA
ATTGGGTCCCTAAAGTCTTGGAACAACGTCGACAAGGTTTGGAAACATATCTACAGGCTG
TCATTCTAGAAAATGAAGAACTCCCCAAACTGTTTCTTGATTTCCTAAACGTGCGACATT
TGCCCTCTCTACCAAAGGCAGAGAGTTGTGGGTAAGAGTTTTTCTTTGCCTCTTGGGCAT
GTATCTTAAATAACTTTGCAGTCACCTTTGGGCCTCACCAATAATGCAGGTGGTGCCAGC
AGGGCCAGCCTGGCCACACCCATTCTTTTCAAGGCTTGGGACAGCACTAGCTCGCCCCCT
GCCTGTAGTCACGGGAATTTCTCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|37181302|gb|AAQ88465.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|37181302|gb|AAQ88465.1|

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               7-367, gnl|bosTau2|chr7 (24479067-24478704)
               

               
               7-367, gnl|Hg17|chr5 (122208660-122209023)
               

               
               7-367, gnl|Mm7|chr18 (53626113-53626408)
               


               
               572-931, gnl|bosTau2|chr16 (7508393-7508037)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-367, gnl|bosTau2|chr7 (24479067-24478704)
               

               
               7-367, gnl|Hg17|chr5 (122208660-122209023)
               

               
               7-367, gnl|Mm7|chr18 (53626113-53626408)
               


               
               572-931, gnl|bosTau2|chr16 (7508393-7508037)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cki (0.165235)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)

	7-367, gnl\|bosTau2\|chr7 (24479067-24478704)
	7-367, gnl\|Hg17\|chr5 (122208660-122209023)
	7-367, gnl\|Mm7\|chr18 (53626113-53626408)

	572-931, gnl\|bosTau2\|chr16 (7508393-7508037)