Non-Coding RNA Search

Ss1.1-Utr1-UTR010043D12.5

Sequence:


               
               ACAGCTTCATTTATTATTTAGTTGATGATTCCATTTGTATAATCATACAATGATTCTTTT
AAACAACACTGTTATACCTGCAGTTGGTCGCATTGTACTCTCTCTCTTCTTTCTCTAGTA
GCAAAGTGGGGTTTTTTCCACACTCAATTTTTTAATAGAACATTTTCAAATATCAAGAAG
TGTGATTAACTAAAAGTGAAGAACGGACCAAACTCCATGAGAAATGATTGCACTTTCAGT
TAAAGGGCGAATGCTGTTCCGGCGAGTCATGTCCACTCGGGAGGAGACACAGCGGTCTTG
TGGGAACCTGGGGCAGGTGAGTGTTGGTGGGTCAAAGCGACTCACTGAGGCCTGTTCGGC
AGCTTGGAAGTTGAGGTTTAATACTGGCCCATCATTGCCTTTTCTAGTCAGAATGGCTTC
CTCCAGTCAAAGTGGAGGCCGTGCCCTCAGGCTGTGACCAACGGTGCTGTCCTGGGGCAA
ATGTCTTCCAGTCAGTTCCTCAGGGGATCTTAATGCTCCTTCCTGCTCCATAATGGCCGT
ATTTTTTACTTGAAAGTAGATGGGACCCAGCCACAGGGGTTGTACAGTGTGTGTGTGTAG
TTTGTGTACATAATGTGTGTCTGTACTGTGTATATATAGTGTGTGTATACTCTGTGTGGA
GTGTGTAGCATGTGTGTAGATAACTGTGTGCACCATGTGTGTGTACGCTGTGTATATTGT
GTAGAAAGTGTACATGCTGTAGTGTGTACATCTGGCTGTGTGTAGCGTGTGTGCATATAG
TCTGTGTGTATAATGTGTGTGCCTACAGTTGTGCCTGTGTAGTGTGTGTATAGACTGTGT
AGAGCATGTACAGTGTATCTGTGGTGTGTATGTTGTAGTGTGTGTAGTATGTGTGTACTC
TGCATAGGGTGTGTACAGTGTGTTTATTGTGTGTATACTCTATGTAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAGCTTCATTTATTATTTAGTTGATGATTCCATTTGTATAATCATACAATGATTCTTTT
AAACAACACTGTTATACCTGCAGTTGGTCGCATTGTACTCTCTCTCTTCTTTCTCTAGTA
GCAAAGTGGGGTTTTTTCCACACTCAATTTTTTAATAGAACATTTTCAAATATCAAGAAG
TGTGATTAACTAAAAGTGAAGAACGGACCAAACTCCATGAGAAATGATTGCACTTTCAGT
TAAAGGGCGAATGCTGTTCCGGCGAGTCATGTCCACTCGGGAGGAGACACAGCGGTCTTG
TGGGAACCTGGGGCAGGTGAGTGTTGGTGGGTCAAAGCGACTCACTGAGGCCTGTTCGGC
AGCTTGGAAGTTGAGGTTTAATACTGGCCCATCATTGCCTTTTCTAGTCAGAATGGCTTC
CTCCAGTCAAAGTGGAGGCCGTGCCCTCAGGCTGTGACCAACGGTGCTGTCCTGGGGCAA
ATGTCTTCCAGTCAGTTCCTCAGGGGATCTTAATGCTCCTTCCTGCTCCATAATGGCCGT
ATTTTTTACTTGAAAGTAGATGGGACCCAGCCACAGGGGTTGTACAGTGTGTGTGTGTAG
TTTGTGTACATAATGTGTGTCTGTACTGTGTATATATAGTGTGTGTATACTCTGTGTGGA
GTGTGTAGCATGTGTGTAGATAACTGTGTGCACCATGTGTGTGTACGCTGTGTATATTGT
GTAGAAAGTGTACATGCTGTAGTGTGTACATCTGGCTGTGTGTAGCGTGTGTGCATATAG
TCTGTGTGTATAATGTGTGTGCCTACAGTTGTGCCTGTGTAGTGTGTGTATAGACTGTGT
AGAGCATGTACAGTGTATCTGTGGTGTGTATGTTGTAGTGTGTGTAGTATGTGTGTACTC
TGCATAGGGTGTGTACAGTGTGTTTATTGTGTGTATACTCTATGTAAG

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               3-931, gnl|bosTau2|chr16 (40076263-40075334)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-931, gnl|bosTau2|chr16 (40076263-40075334)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               fhi (0.508733)
               

               
               fce (0.271592)
               

               
               cbe (0.239234)
               

               
               ecc (0.23007)
               

               
               fcc (0.197785)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.508733)
               

               
               fce (0.271592)
               

               
               cbe (0.239234)
               

               
               ecc (0.23007)
               

               
               fcc (0.197785)

	fhi (0.508733)
	fce (0.271592)
	cbe (0.239234)
	ecc (0.23007)
	fcc (0.197785)