Ss1.1-Utr1-UTR010047H08.5
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GGTGGGGCCTCCACGCTCATCCTATAAATGGGAGGGGGGTGGGACTTCTTGGCAGCAGGG
CCCCTTGCTCTAATTGGGGTCACCTCAGGCAGCCTTCTTGGATATGCCTTGTGGGAGGGA
AGAATCAACACGGCCGACCAAATCCGGCTTAGGATGAGGCAAGGGGAAAAAGCAGGCGGG
GAGGGGGTCCTTGTAGAGACACGTAATCTCACACGTACACACGTGGCTACACGCATGTGC
GGGCGCTGCAGCCAGCCAGGCTGGGCCAGCCGCCCCACCATTTCCCCGACTGCATGGAGA
CAGTAGAATTAGTGAACCCCTCAGTTAACTCGTAAGGCCTTCCGTGTAACCTGCATCTAG
AGTTTAAGAAGCTTCTGCTGTTTTGCCGGAATTGGCGGTGATTGGGGAGGGCTGGGTGGG
TTCGGGACCTTCGCTGGGACCCTGGGGCCGGGGGAAGAGGACGGCCACCTTGGGGCTGTC
CAGTCAGCACGTGCACGCTTTGGACCTGTTCTGCACACTTCTTGCCAGCTCTGTGGCAGC
CTCAGCCAGTGTGTCCCCCTCCTTTACCTTCCCAGCCGGAAGAGTGGGGACCACAGAAGT
GGCCGGGGCTGGCCAGAGGTCACTCTTTCTTCCTCCCCTGTGCTCCAGCAACTTTCGAAG
ATACTGGGCTGGGACATTTTTCCCCCTGAAAAGAGCCGGGGGCAGCCAGAGCTGCTGACA
CCCACCTCCTCCATGAGCAAGTCTGTTTCTCTGCTTCTGAGAACCCTCTTCCAGGCCTAA
GTTTCAACACAAGGGCCAGGGCTGGGGCATTTAATTGGTGGTGACAGAGAACAAAGGCTT
TTGCTTTGCTAGCAAGAAGAAAACTGAAGGCTAAGGGTGGTGTACCCCCTGACCCCCCTC
TGGGACTTCCTGGTCATCACAGCTCCCAGGAGGTCTCAAGACCCTACCAGACTGGGGTAG
TGATTCTAGGGAAACTTCTCAGATTGGTTGGGGATGTGGTCACAGTGGGAGAGGCTCCCC
TACAAAGGGAGGGATGTGTTTACTTCCCAGTTGGCCTCAGAACTGAAACCAGGCCCTGCA
GTCCCCTTAATGTGTTTTCCTTTTTCTCTTCCCTGCTTTCTACTTATTTCGGGAACTCTT
TTGCGGTTTGGGGGAGGGGAGTTGACTGGATACCTGCATCCTGGGGCCTTCTCCATCCAT
CCTTTAGGAGCCCTGGACCACACCCCCATCATAGCCCTGTGTCTTCTGTCAGACAGGGTC
AGGCCCTGCCTCTATGCCCAGGGGCACTTGGTGCACATTCCATAAACTCAGCTGGTTCTC
CCACTGTGAAACTCCAGCAGGTCTCTGGAAGCCATTTGTAAAAAAGAAAAGAAAAAGAAA
AAAAAAATTAAACACCATTTAATTTTCTGGTAATTCCAGTTCTTTGGAGCATCCTCTGCT
GGGTCTTGGGGGTGTGTAGATTGGCTGTCTGGTGGGATTGGTAACCCCTTCTCCACCCAG
GATGGGGGGATCCAGCCACCTTCAGGGAAGGGGAGCCTGGTTCTAGTTATCTTTTTTCTT
TCTTTCTTTTTTTTAATTAAGAAAACTATTTAATTTTTTTAACTTATTTTTGGTTGATTT
TTGCACAACGAAGTTTCAGCTTCTCAACCTTTTCCCCTGCCCAGGGCTTCAGACCCTGAC
TGGCCTCAACCTTCAGTCCCTTTTTCCCCTATCCCTCTTTCCCCCTCATCCTCTTCCTCC
TGTGGGCTCCAGGGTCTGTCCATTTGTTACCGTGCTGTGCTGGGGATTAGCGCCAAGGTG
GCGTGAGATTCCACTTGTGTAGAACTTTGTTGAGTAAAGATCAGTTTC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GGTGGGGCCTCCACGCTCATCCTATAAATGGGAGGGGGGTGGGACTTCTTGGCAGCAGGG
CCCCTTGCTCTAATTGGGGTCACCTCAGGCAGCCTTCTTGGATATGCCTTGTGGGAGGGA
AGAATCAACACGGCCGACCAAATCCGGCTTAGGATGAGGCAAGGGGAAAAAGCAGGCGGG
GAGGGGGTCCTTGTAGAGACACGTAATCTCACACGTACACACGTGGCTACACGCATGTGC
GGGCGCTGCAGCCAGCCAGGCTGGGCCAGCCGCCCCACCATTTCCCCGACTGCATGGAGA
CAGTAGAATTAGTGAACCCCTCAGTTAACTCGTAAGGCCTTCCGTGTAACCTGCATCTAG
AGTTTAAGAAGCTTCTGCTGTTTTGCCGGAATTGGCGGTGATTGGGGAGGGCTGGGTGGG
TTCGGGACCTTCGCTGGGACCCTGGGGCCGGGGGAAGAGGACGGCCACCTTGGGGCTGTC
CAGTCAGCACGTGCACGCTTTGGACCTGTTCTGCACACTTCTTGCCAGCTCTGTGGCAGC
CTCAGCCAGTGTGTCCCCCTCCTTTACCTTCCCAGCCGGAAGAGTGGGGACCACAGAAGT
GGCCGGGGCTGGCCAGAGGTCACTCTTTCTTCCTCCCCTGTGCTCCAGCAACTTTCGAAG
ATACTGGGCTGGGACATTTTTCCCCCTGAAAAGAGCCGGGGGCAGCCAGAGCTGCTGACA
CCCACCTCCTCCATGAGCAAGTCTGTTTCTCTGCTTCTGAGAACCCTCTTCCAGGCCTAA
GTTTCAACACAAGGGCCAGGGCTGGGGCATTTAATTGGTGGTGACAGAGAACAAAGGCTT
TTGCTTTGCTAGCAAGAAGAAAACTGAAGGCTAAGGGTGGTGTACCCCCTGACCCCCCTC
TGGGACTTCCTGGTCATCACAGCTCCCAGGAGGTCTCAAGACCCTACCAGACTGGGGTAG
TGATTCTAGGGAAACTTCTCAGATTGGTTGGGGATGTGGTCACAGTGGGAGAGGCTCCCC
TACAAAGGGAGGGATGTGTTTACTTCCCAGTTGGCCTCAGAACTGAAACCAGGCCCTGCA
GTCCCCTTAATGTGTTTTCCTTTTTCTCTTCCCTGCTTTCTACTTATTTCGGGAACTCTT
TTGCGGTTTGGGGGAGGGGAGTTGACTGGATACCTGCATCCTGGGGCCTTCTCCATCCAT
CCTTTAGGAGCCCTGGACCACACCCCCATCATAGCCCTGTGTCTTCTGTCAGACAGGGTC
AGGCCCTGCCTCTATGCCCAGGGGCACTTGGTGCACATTCCATAAACTCAGCTGGTTCTC
CCACTGTGAAACTCCAGCAGGTCTCTGGAAGCCATTTGTAAAAAAGAAAAGAAAAAGAAA
AAAAAAATTAAACACCATTTAATTTTCTGGTAATTCCAGTTCTTTGGAGCATCCTCTGCT
GGGTCTTGGGGGTGTGTAGATTGGCTGTCTGGTGGGATTGGTAACCCCTTCTCCACCCAG
GATGGGGGGATCCAGCCACCTTCAGGGAAGGGGAGCCTGGTTCTAGTTATCTTTTTTCTT
TCTTTCTTTTTTTTAATTAAGAAAACTATTTAATTTTTTTAACTTATTTTTGGTTGATTT
TTGCACAACGAAGTTTCAGCTTCTCAACCTTTTCCCCTGCCCAGGGCTTCAGACCCTGAC
TGGCCTCAACCTTCAGTCCCTTTTTCCCCTATCCCTCTTTCCCCCTCATCCTCTTCCTCC
TGTGGGCTCCAGGGTCTGTCCATTTGTTACCGTGCTGTGCTGGGGATTAGCGCCAAGGTG
GCGTGAGATTCCACTTGTGTAGAACTTTGTTGAGTAAAGATCAGTTTC
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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531-639, + strand, RNAmicro p=0.999985 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
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531-639, + strand, RNAmicro p=0.999985 |
Human gene identifier and UTR site,
human gene reading direction
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1-1215, gnl|bosTau2|chr7 (8415960-8414726) |
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1-1215, gnl|Hg17|chr19 (12672887-12671589) |
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1-1215, gnl|Mm7|chr8 (83644395-83645600) |
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1280-1509, gnl|bosTau2|chr7 (8414721-8414504) |
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1280-1509, gnl|Hg17|chr19 (12671577-12671316) |
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1280-1509, gnl|Mm7|chr8 (83645651-83645919) |
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1527-1848, gnl|bosTau2|chr7 (8414512-8414197) |
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1527-1848, gnl|canFam2|chr20 (52426532-52426052) |
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1527-1848, gnl|dasNov1|scaffold_124546 (4314-3841) |
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1527-1848, gnl|echTel1|scaffold_247721 (5764-5330) |
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1527-1848, gnl|hg17|chr19 (12671005-12671464) |
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1527-1848, gnl|Hg17|chr19 (12671350-12671022) |
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1527-1848, gnl|loxAfr1|scaffold_90785 (5087-5543) |
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1527-1848, gnl|mm7|chr8 (83646256-83645767) |
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1527-1848, gnl|Mm7|chr8 (83645877-83646237) |
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1527-1848, gnl|monDom2|scaffold_106 (3753054-3753581) |
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1527-1848, gnl|oryCun1|scaffold_190253 (7927-7412) |
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1527-1848, gnl|panTro1|chr20 (13205805-13206264) |
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1527-1848, gnl|rheMac2|chr19 (12357393-12357849) |
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1527-1848, gnl|rn3|chr19 (24760502-24760981) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-1215, gnl|bosTau2|chr7 (8415960-8414726) |
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1-1215, gnl|Hg17|chr19 (12672887-12671589) |
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1-1215, gnl|Mm7|chr8 (83644395-83645600) |
| |
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1280-1509, gnl|bosTau2|chr7 (8414721-8414504) |
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1280-1509, gnl|Hg17|chr19 (12671577-12671316) |
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1280-1509, gnl|Mm7|chr8 (83645651-83645919) |
| |
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1527-1848, gnl|bosTau2|chr7 (8414512-8414197) |
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1527-1848, gnl|canFam2|chr20 (52426532-52426052) |
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1527-1848, gnl|dasNov1|scaffold_124546 (4314-3841) |
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1527-1848, gnl|echTel1|scaffold_247721 (5764-5330) |
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1527-1848, gnl|hg17|chr19 (12671005-12671464) |
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1527-1848, gnl|Hg17|chr19 (12671350-12671022) |
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1527-1848, gnl|loxAfr1|scaffold_90785 (5087-5543) |
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1527-1848, gnl|mm7|chr8 (83646256-83645767) |
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1527-1848, gnl|Mm7|chr8 (83645877-83646237) |
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1527-1848, gnl|monDom2|scaffold_106 (3753054-3753581) |
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1527-1848, gnl|oryCun1|scaffold_190253 (7927-7412) |
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1527-1848, gnl|panTro1|chr20 (13205805-13206264) |
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1527-1848, gnl|rheMac2|chr19 (12357393-12357849) |
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1527-1848, gnl|rn3|chr19 (24760502-24760981) |
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amn (0.417711) |
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cag (0.302389) |
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ebs (0.236602) |
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ece (0.229305) |
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ill (0.175593) |
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fbs (0.175346) |
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fhi (0.169578) |
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cki (0.165235) |
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hlv (0.139256) |
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che (0.136314) |
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ova (0.129132) |
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ese (0.126502) |
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pgl (0.118483) |
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ecc (0.115035) |
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nbm (0.0993246) |
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eje (0.0988338) |
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amn (0.417711) |
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cag (0.302389) |
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ebs (0.236602) |
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ece (0.229305) |
|
ill (0.175593) |
|
fbs (0.175346) |
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fhi (0.169578) |
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cki (0.165235) |
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hlv (0.139256) |
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che (0.136314) |
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ova (0.129132) |
|
ese (0.126502) |
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pgl (0.118483) |
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ecc (0.115035) |
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nbm (0.0993246) |
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eje (0.0988338) |
