Non-Coding RNA Search

Ss1.1-Utr1-UTR010049C07.5

Sequence:


               
               CGCCTCTTCGGAATCGGCAGAGGCAAGTTAAATAAACGTTTAATTATAAACTTGAGAGTG
AAAATGGGCACTGCTAATAATTCTGCTAGGACAATTAGCATAACCTGGGAGTGTCCTGGG
CAAACCAGACATGTACATCACTTGGCCATCAGTCTTCCTGTGAACTGCTTGCCCTGGTAG
TAGCCTCATACTTAGTCCAAGTAAGTTGGAAGAGCAAACAAAACTTCCTTCATCAGGGAC
TCTGGGTTAGCTGTTCCCCTCTGAGAGTATTTATATGGGAGACACCCTAAGGTTNGGCCT
GCCCCATACATCAAAATAGTCTGTTTTCTGTCCCTGTACCTTTACTCACGCTTTTCTTTC
TCTGCCCTCTTTCCCATCCCTCTTATGTTTGTTATAATCTACCCCATCGCTCAAACCTCT
GCTTAAATGGTATTTTCTTCATAAAAGCTATCCCTGTAACACCCTTTTTAGACTTAGAAG
TAGGTATTTATATTTTAGAAAACTCACATGGCACAGTGCCTTAGACCAGGTCCCTGAACT
TAGCTGAGCATCAGAAACACCTCAGTAGCTTTAAATACAGATTCCTGTGTCCCACCCTAA
GTCCTTTGATTAATAATCAGTGGTGGTAGTTTTTTTGTTTGTTTTGTTTTTAAACTCTTC
ATATGATTCTTGTATAACTAGCCAGCTGGCTCAGTATTTGGAGTCTGTTAATTTAGACGT
ACATTATTTTAGGTAAACATTGACTTTTAGAATTAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCCTCTTCGGAATCGGCAGAGGCAAGTTAAATAAACGTTTAATTATAAACTTGAGAGTG
AAAATGGGCACTGCTAATAATTCTGCTAGGACAATTAGCATAACCTGGGAGTGTCCTGGG
CAAACCAGACATGTACATCACTTGGCCATCAGTCTTCCTGTGAACTGCTTGCCCTGGTAG
TAGCCTCATACTTAGTCCAAGTAAGTTGGAAGAGCAAACAAAACTTCCTTCATCAGGGAC
TCTGGGTTAGCTGTTCCCCTCTGAGAGTATTTATATGGGAGACACCCTAAGGTTNGGCCT
GCCCCATACATCAAAATAGTCTGTTTTCTGTCCCTGTACCTTTACTCACGCTTTTCTTTC
TCTGCCCTCTTTCCCATCCCTCTTATGTTTGTTATAATCTACCCCATCGCTCAAACCTCT
GCTTAAATGGTATTTTCTTCATAAAAGCTATCCCTGTAACACCCTTTTTAGACTTAGAAG
TAGGTATTTATATTTTAGAAAACTCACATGGCACAGTGCCTTAGACCAGGTCCCTGAACT
TAGCTGAGCATCAGAAACACCTCAGTAGCTTTAAATACAGATTCCTGTGTCCCACCCTAA
GTCCTTTGATTAATAATCAGTGGTGGTAGTTTTTTTGTTTGTTTTGTTTTTAAACTCTTC
ATATGATTCTTGTATAACTAGCCAGCTGGCTCAGTATTTGGAGTCTGTTAATTTAGACGT
ACATTATTTTAGGTAAACATTGACTTTTAGAATTAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               24-280, gnl|bosTau2|chr11 (16652684-16652430)
               

               
               24-280, gnl|Hg17|chr2 (39522483-39521834)
               

               
               24-280, gnl|Mm7|chr17 (78983887-78983647)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               24-280, gnl|bosTau2|chr11 (16652684-16652430)
               

               
               24-280, gnl|Hg17|chr2 (39522483-39521834)
               

               
               24-280, gnl|Mm7|chr17 (78983887-78983647)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cki (0.165235)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cki (0.165235)

	24-280, gnl\|bosTau2\|chr11 (16652684-16652430)
	24-280, gnl\|Hg17\|chr2 (39522483-39521834)
	24-280, gnl\|Mm7\|chr17 (78983887-78983647)