Non-Coding RNA Search

Ss1.1-Utr1-UTR010049E11.5

Sequence:


               
               CTCATTTTAGGTTGTGCATGTTTTTCCAGTTGACCGTTTCTATGGTAATTTTATGTTTAA
CTTTTTGAGGAACCACAAACTCCCTCAGCAGCCACACCACCTTGCATTCCCTCCAGCAAC
ACACAAGTCACTGGCACCTGCTGACCACGACGTGAGAAGAACCCGCCTGAGCATGAGGCC
AACACAGAGCAGAGAGAGAATTTCCCTATGGCAATTTGTTGAGCAGCTAGATCAAGTCCT
ACCTGAAGCTGTTTCTACCAGTTGACTTTTCAGTTATGCCAAGTTTTGCATTTCTGTTTT
CCATCATGAGTGAGTTTGACTTTGGCTTCTGTCCATCACAAATGAAAAAGCCCTCTGTGA
CACACCGTCTAAGCATCTCATTAGTGGCATGGCCGACTTACCTTCTGCATGCTGCGGTCA
AACTCATCCTCCTCTCCTCCCGATGAGAATCTTCTGGCTCGGGGCACTGATGGAAGACGG
ACAGGATCAGTTCCTGCTCATGCTCCCCACTCAGCCTGCCCAGGGTGGAGGCATGGGGGT
GGTTCAGCCTCAAAAGGCGGGGGTTTCCTCTAGGCTCTGCCACGTTCTAGCTGAGTGGCT
GGAGAGTGCCCTTTGCGGAGCTGCCTCCATCCTGGGCCCCGGGTTTGGGGACACCCGGCA
TCCCCTCCATTCCAGGGCCAGAATGTGCAGGTGAAGCCGACTGCCCAAACCCAGCCAATA
AGCCTCCATGGTGGGACTTCTCCGGTGGGAGAGAGAAGTCTTCTTTCTGCCAAGGGTCGG
AGGTAAGCCTGGACCTGCCAGAGTTCATCTTGCCATGATGAAGGCAGAGTCAGCCTGAGG
CTGGCGTCCCCCAACCCAGGGGACAAGCCAGGTCCTCTGGTGTCCATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCATTTTAGGTTGTGCATGTTTTTCCAGTTGACCGTTTCTATGGTAATTTTATGTTTAA
CTTTTTGAGGAACCACAAACTCCCTCAGCAGCCACACCACCTTGCATTCCCTCCAGCAAC
ACACAAGTCACTGGCACCTGCTGACCACGACGTGAGAAGAACCCGCCTGAGCATGAGGCC
AACACAGAGCAGAGAGAGAATTTCCCTATGGCAATTTGTTGAGCAGCTAGATCAAGTCCT
ACCTGAAGCTGTTTCTACCAGTTGACTTTTCAGTTATGCCAAGTTTTGCATTTCTGTTTT
CCATCATGAGTGAGTTTGACTTTGGCTTCTGTCCATCACAAATGAAAAAGCCCTCTGTGA
CACACCGTCTAAGCATCTCATTAGTGGCATGGCCGACTTACCTTCTGCATGCTGCGGTCA
AACTCATCCTCCTCTCCTCCCGATGAGAATCTTCTGGCTCGGGGCACTGATGGAAGACGG
ACAGGATCAGTTCCTGCTCATGCTCCCCACTCAGCCTGCCCAGGGTGGAGGCATGGGGGT
GGTTCAGCCTCAAAAGGCGGGGGTTTCCTCTAGGCTCTGCCACGTTCTAGCTGAGTGGCT
GGAGAGTGCCCTTTGCGGAGCTGCCTCCATCCTGGGCCCCGGGTTTGGGGACACCCGGCA
TCCCCTCCATTCCAGGGCCAGAATGTGCAGGTGAAGCCGACTGCCCAAACCCAGCCAATA
AGCCTCCATGGTGGGACTTCTCCGGTGGGAGAGAGAAGTCTTCTTTCTGCCAAGGGTCGG
AGGTAAGCCTGGACCTGCCAGAGTTCATCTTGCCATGATGAAGGCAGAGTCAGCCTGAGG
CTGGCGTCCCCCAACCCAGGGGACAAGCCAGGTCCTCTGGTGTCCATC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               5-148, gnl|bosTau2|chr7 (42325428-42325567)
               


               
               241-886, gnl|bosTau2|chr7 (42325583-42326200)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-148, gnl|bosTau2|chr7 (42325428-42325567)
               


               
               241-886, gnl|bosTau2|chr7 (42325583-42326200)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               bla (0.124347)
               

               
               ecc (0.115035)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.124347)
               

               
               ecc (0.115035)
               

               
               eje (0.0988338)

	5-148, gnl\|bosTau2\|chr7 (42325428-42325567)

	241-886, gnl\|bosTau2\|chr7 (42325583-42326200)