Ss1.1-Utr1-UTR010052D11.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GACAAATGTGGGGGCGACGCTGTGCACTACCTGTCCTTCCAGAGGCACATCATCGGGCTG CTGGTGGTCGTGGGCGTCCTCTCCGTCGGCATCGTGCTGCCCGTCAACTTCTCAGGGGAC CTGCTGGAGAACAATGCCTACAGCTTCGGGAGAACCACCATTGCCAACTTGAAATCAGGG AACAACCTTCTATGGCTGCACACCTCCTTCGCCTTCCTGTACCTGCTGCTCACGGTCTAC AGCATGCGCAGACACACCTCCAAGATGCGCTACAAGGAGGACGACCTGGTGAAGAGGACT CTCTTCATCAATGGAATCTCCAAATACGCAGAGTCAGAGAAGATCAAGAAGCATTTTGAG GAGGCCTACCCCAACTGCACGGTTCTTGAAGCCCGCCCGTGTTACAACGTGGCCCGCCTT ATGTTCCTCGATGCAGAGAGGAAGAAGGCTGAGCGGGGAAAGCTCTACTTCACAAACCTC CAAAGCAAGGACAACGTCCCCACCATGATCAACCCCAAGCCCTGCGGCCACCTCTGCTGC TGCGTGGTGCGAGGCTGCGAGCAGGTAGAGGCCATTGAGTACTATACAAAGCTGGAGCAG AAGCTGAAGGAGGACTATAAGCGGGAGAAGGAGAAAGTGAACGAGAAGCCTCTCGGCATG GCCTTCGTCACCTTCCACAATGAGACCATCACCGCCATCATCCTGAAGGACTTCAACGTG TGTAAGTGCCAGGGCTGCACCTGCCGCGGGGAGCCCCGCTCCTCCTCCTGCAGCGAGTCT CTGCACATCTCCAACTGGACCGTGTCCTATGCCCCCGACCCCCAGAACATCTACTGGGAG CACCTCTCCATCCGTGGCTTCATCTGGTGGCTGCGGTGCCTGGTCATCAACGTGGTTCTC TTCATCCTCCTCTTCTTCCTCACCACCCCGGCCATCATCATCACCACCATGGACAAGTTC AATGTCACCAAGCCTGTGGAGTACCTCAACAACCCCATCATCACCCAGTTCTTCCCCACT CTGCTGCTGTGGTGCTTCTCGGCCCTGCTCCCCACCATCGTCTACTACTCTGCCTTCTTT GAAGCCCACTGGACACGCTCCGGCGAGAACAGGACCACGATGCACAAGTGCTACACCTTC CTCATCTTCATGGTACTGCTCCTGCCCTCGCTGGGACTGAGCAGCCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GACAAATGTGGGGGCGACGCTGTGCACTACCTGTCCTTCCAGAGGCACATCATCGGGCTG CTGGTGGTCGTGGGCGTCCTCTCCGTCGGCATCGTGCTGCCCGTCAACTTCTCAGGGGAC CTGCTGGAGAACAATGCCTACAGCTTCGGGAGAACCACCATTGCCAACTTGAAATCAGGG AACAACCTTCTATGGCTGCACACCTCCTTCGCCTTCCTGTACCTGCTGCTCACGGTCTAC AGCATGCGCAGACACACCTCCAAGATGCGCTACAAGGAGGACGACCTGGTGAAGAGGACT CTCTTCATCAATGGAATCTCCAAATACGCAGAGTCAGAGAAGATCAAGAAGCATTTTGAG GAGGCCTACCCCAACTGCACGGTTCTTGAAGCCCGCCCGTGTTACAACGTGGCCCGCCTT ATGTTCCTCGATGCAGAGAGGAAGAAGGCTGAGCGGGGAAAGCTCTACTTCACAAACCTC CAAAGCAAGGACAACGTCCCCACCATGATCAACCCCAAGCCCTGCGGCCACCTCTGCTGC TGCGTGGTGCGAGGCTGCGAGCAGGTAGAGGCCATTGAGTACTATACAAAGCTGGAGCAG AAGCTGAAGGAGGACTATAAGCGGGAGAAGGAGAAAGTGAACGAGAAGCCTCTCGGCATG GCCTTCGTCACCTTCCACAATGAGACCATCACCGCCATCATCCTGAAGGACTTCAACGTG TGTAAGTGCCAGGGCTGCACCTGCCGCGGGGAGCCCCGCTCCTCCTCCTGCAGCGAGTCT CTGCACATCTCCAACTGGACCGTGTCCTATGCCCCCGACCCCCAGAACATCTACTGGGAG CACCTCTCCATCCGTGGCTTCATCTGGTGGCTGCGGTGCCTGGTCATCAACGTGGTTCTC TTCATCCTCCTCTTCTTCCTCACCACCCCGGCCATCATCATCACCACCATGGACAAGTTC AATGTCACCAAGCCTGTGGAGTACCTCAACAACCCCATCATCACCCAGTTCTTCCCCACT CTGCTGCTGTGGTGCTTCTCGGCCCTGCTCCCCACCATCGTCTACTACTCTGCCTTCTTT GAAGCCCACTGGACACGCTCCGGCGAGAACAGGACCACGATGCACAAGTGCTACACCTTC CTCATCTTCATGGTACTGCTCCTGCCCTCGCTGGGACTGAGCAGCCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 95 entry(ies) | More info |
| Aligned organism(s): 95 entry(ies) | Help | Less info |
| 7-127, gnl|bosTau2|chr16 (17246110-17245990) | |
| 7-127, gnl|canFam2|chr7 (41919462-41919262) | |
| 7-127, gnl|danRer3|chr13 (45680375-45680524) | |
| 7-127, gnl|dasNov1|scaffold_54785 (3143-2955) | |
| 7-127, gnl|echTel1|scaffold_289886 (171193-171371) | |
| 7-127, gnl|fr1|chrUn (117845155-117844995) | |
| 7-127, gnl|galGal2|chr5 (35968143-35967988) | |
| 7-127, gnl|hg17|chr1 (222362321-222362516) | |
| 7-127, gnl|Hg17|chr1 (222362443-222362323) | |
| 7-127, gnl|loxAfr1|scaffold_26398 (19775-19573) | |
| 7-127, gnl|mm7|chr1 (180934603-180934397) | |
| 7-127, gnl|Mm7|chr1 (180934479-180934599) | |
| 7-127, gnl|monDom2|scaffold_13 (33447257-33447435) | |
| 7-127, gnl|oryCun1|scaffold_160298 (3398-3201) | |
| 7-127, gnl|panTro1|chr1 (206177603-206177798) | |
| 7-127, gnl|rheMac2|chr1 (144528533-144528336) | |
| 7-127, gnl|rn3|chr13 (96872811-96872604) | |
| 7-127, gnl|tetNig1|chrUn_random (47649017-47648843) | |
| 7-127, gnl|xenTro1|scaffold_215 (1585910-1585755) | |
| 179-292, gnl|bosTau2|chr23 (17646818-17646705) | |
| 179-292, gnl|canFam2|chr12 (15565534-15565673) | |
| 179-292, gnl|danRer3|chr13 (45679410-45679279) | |
| 179-292, gnl|dasNov1|scaffold_54785 (4213-4338) | |
| 179-292, gnl|echTel1|scaffold_289886 (168392-168264) | |
| 179-292, gnl|fr1|chrUn (117845364-117845504) | |
| 179-292, gnl|galGal2|chr3 (26655519-26655381) | |
| 179-292, gnl|hg17|chr6 (44215959-44216095) | |
| 179-292, gnl|Hg17|chr6 (44215966-44216079) | |
| 179-292, gnl|loxAfr1|scaffold_47448 (9211-9345) | |
| 179-292, gnl|mm7|chr17 (43803255-43803124) | |
| 179-292, gnl|Mm7|chr17 (43803246-43803133) | |
| 179-292, gnl|monDom2|scaffold_0 (196755099-196754949) | |
| 179-292, gnl|oryCun1|scaffold_38232 (904-1031) | |
| 179-292, gnl|panTro1|chr5 (44823154-44823290) | |
| 179-292, gnl|rheMac2|chr4 (44060254-44060390) | |
| 179-292, gnl|rn3|chr9 (10922856-10922986) | |
| 179-292, gnl|tetNig1|chrUn_random (47649641-47649774) | |
| 179-292, gnl|xenTro1|scaffold_1427 (84929-84799) | |
| 561-698, gnl|bosTau2|chr23 (17640795-17640658) | |
| 561-698, gnl|Hg17|chr6 (44223947-44224100) | |
| 561-698, gnl|Mm7|chr17 (43796119-43795982) | |
| 830-974, gnl|bosTau2|chr16 (17237189-17237045) | |
| 830-974, gnl|canFam2|chr7 (41927065-41926904) | |
| 830-974, gnl|danRer3|chr13 (45662108-45662298) | |
| 830-974, gnl|dasNov1|scaffold_32561 (215-388) | |
| 830-974, gnl|echTel1|scaffold_177009 (234-57) | |
| 830-974, gnl|fr1|chrUn (117848136-117847962) | |
| 830-974, gnl|galGal2|chr3 (13551132-13550959) | |
| 830-974, gnl|hg17|chr1 (222353611-222353804) | |
| 830-974, gnl|Hg17|chr1 (222353791-222353647) | |
| 830-974, gnl|mm7|chr1 (180942823-180942636) | |
| 830-974, gnl|Mm7|chr1 (180942641-180942785) | |
| 830-974, gnl|monDom2|scaffold_13 (33435087-33435280) | |
| 830-974, gnl|oryCun1|scaffold_214327 (42881-42691) | |
| 830-974, gnl|panTro1|chr1 (206168697-206168890) | |
| 830-974, gnl|rheMac2|chr1 (144537488-144537294) | |
| 830-974, gnl|rn3|chr13 (96881428-96881240) | |
| 830-974, gnl|tetNig1|chrUn_random (47651222-47651038) | |
| 830-974, gnl|xenTro1|scaffold_215 (1590587-1590412) | |
| 836-969, gnl|bosTau2|chr10 (61972521-61972654) | |
| 836-969, gnl|canFam2|chr8 (53097887-53098046) | |
| 836-969, gnl|danRer3|chr17 (46162933-46162775) | |
| 836-969, gnl|dasNov1|scaffold_57004 (5534-5693) | |
| 836-969, gnl|echTel1|scaffold_177009 (73-225) | |
| 836-969, gnl|fr1|chrUn (34952038-34951880) | |
| 836-969, gnl|galGal2|chr5 (35970860-35971022) | |
| 836-969, gnl|hg17|chr14 (76778997-76779156) | |
| 836-969, gnl|Hg17|chr14 (76778998-76779131) | |
| 836-969, gnl|mm7|chr12 (85078183-85078342) | |
| 836-969, gnl|Mm7|chr12 (85078184-85078317) | |
| 836-969, gnl|monDom2|scaffold_8 (56257013-56256854) | |
| 836-969, gnl|oryCun1|scaffold_207183 (32302-32461) | |
| 836-969, gnl|panTro1|chr15 (76839529-76839688) | |
| 836-969, gnl|rheMac2|chr7 (140384766-140384925) | |
| 836-969, gnl|rn3|chr6 (111212173-111212332) | |
| 836-969, gnl|tetNig1|chr10 (4943906-4943748) | |
| 836-969, gnl|xenTro1|scaffold_1427 (80661-80502) | |
| 986-1094, gnl|bosTau2|chr16 (17234338-17234230) | |
| 986-1094, gnl|canFam2|chr7 (41929482-41929339) | |
| 986-1094, gnl|danRer3|chr13 (45660785-45660920) | |
| 986-1094, gnl|echTel1|scaffold_177009 (1653-1506) | |
| 986-1094, gnl|fr1|chrUn (117848398-117848259) | |
| 986-1094, gnl|galGal2|chr3 (13551915-13551793) | |
| 986-1094, gnl|hg17|chr1 (222351342-222351492) | |
| 986-1094, gnl|Hg17|chr1 (222351458-222351349) | |
| 986-1094, gnl|loxAfr1|scaffold_9215 (7778-7919) | |
| 986-1094, gnl|mm7|chr1 (180945301-180945160) | |
| 986-1094, gnl|Mm7|chr1 (180945184-180945292) | |
| 986-1094, gnl|monDom2|scaffold_13 (33433887-33434045) | |
| 986-1094, gnl|oryCun1|scaffold_191200 (8033-8159) | |
| 986-1094, gnl|panTro1|chr1 (206166424-206166574) | |
| 986-1094, gnl|rheMac2|chr1 (144539779-144539627) | |
| 986-1094, gnl|rn3|chr13 (96883186-96883045) | |
| 986-1094, gnl|tetNig1|chrUn_random (47651383-47651244) | |
| 986-1094, gnl|xenTro1|scaffold_215 (1591445-1591311) |
| Aligned organism(s): 95 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 7-127, gnl|bosTau2|chr16 (17246110-17245990) | |
| 7-127, gnl|canFam2|chr7 (41919462-41919262) | |
| 7-127, gnl|danRer3|chr13 (45680375-45680524) | |
| 7-127, gnl|dasNov1|scaffold_54785 (3143-2955) | |
| 7-127, gnl|echTel1|scaffold_289886 (171193-171371) | |
| 7-127, gnl|fr1|chrUn (117845155-117844995) | |
| 7-127, gnl|galGal2|chr5 (35968143-35967988) | |
| 7-127, gnl|hg17|chr1 (222362321-222362516) | |
| 7-127, gnl|Hg17|chr1 (222362443-222362323) | |
| 7-127, gnl|loxAfr1|scaffold_26398 (19775-19573) | |
| 7-127, gnl|mm7|chr1 (180934603-180934397) | |
| 7-127, gnl|Mm7|chr1 (180934479-180934599) | |
| 7-127, gnl|monDom2|scaffold_13 (33447257-33447435) | |
| 7-127, gnl|oryCun1|scaffold_160298 (3398-3201) | |
| 7-127, gnl|panTro1|chr1 (206177603-206177798) | |
| 7-127, gnl|rheMac2|chr1 (144528533-144528336) | |
| 7-127, gnl|rn3|chr13 (96872811-96872604) | |
| 7-127, gnl|tetNig1|chrUn_random (47649017-47648843) | |
| 7-127, gnl|xenTro1|scaffold_215 (1585910-1585755) | |
| 179-292, gnl|bosTau2|chr23 (17646818-17646705) | |
| 179-292, gnl|canFam2|chr12 (15565534-15565673) | |
| 179-292, gnl|danRer3|chr13 (45679410-45679279) | |
| 179-292, gnl|dasNov1|scaffold_54785 (4213-4338) | |
| 179-292, gnl|echTel1|scaffold_289886 (168392-168264) | |
| 179-292, gnl|fr1|chrUn (117845364-117845504) | |
| 179-292, gnl|galGal2|chr3 (26655519-26655381) | |
| 179-292, gnl|hg17|chr6 (44215959-44216095) | |
| 179-292, gnl|Hg17|chr6 (44215966-44216079) | |
| 179-292, gnl|loxAfr1|scaffold_47448 (9211-9345) | |
| 179-292, gnl|mm7|chr17 (43803255-43803124) | |
| 179-292, gnl|Mm7|chr17 (43803246-43803133) | |
| 179-292, gnl|monDom2|scaffold_0 (196755099-196754949) | |
| 179-292, gnl|oryCun1|scaffold_38232 (904-1031) | |
| 179-292, gnl|panTro1|chr5 (44823154-44823290) | |
| 179-292, gnl|rheMac2|chr4 (44060254-44060390) | |
| 179-292, gnl|rn3|chr9 (10922856-10922986) | |
| 179-292, gnl|tetNig1|chrUn_random (47649641-47649774) | |
| 179-292, gnl|xenTro1|scaffold_1427 (84929-84799) | |
| 561-698, gnl|bosTau2|chr23 (17640795-17640658) | |
| 561-698, gnl|Hg17|chr6 (44223947-44224100) | |
| 561-698, gnl|Mm7|chr17 (43796119-43795982) | |
| 830-974, gnl|bosTau2|chr16 (17237189-17237045) | |
| 830-974, gnl|canFam2|chr7 (41927065-41926904) | |
| 830-974, gnl|danRer3|chr13 (45662108-45662298) | |
| 830-974, gnl|dasNov1|scaffold_32561 (215-388) | |
| 830-974, gnl|echTel1|scaffold_177009 (234-57) | |
| 830-974, gnl|fr1|chrUn (117848136-117847962) | |
| 830-974, gnl|galGal2|chr3 (13551132-13550959) | |
| 830-974, gnl|hg17|chr1 (222353611-222353804) | |
| 830-974, gnl|Hg17|chr1 (222353791-222353647) | |
| 830-974, gnl|mm7|chr1 (180942823-180942636) | |
| 830-974, gnl|Mm7|chr1 (180942641-180942785) | |
| 830-974, gnl|monDom2|scaffold_13 (33435087-33435280) | |
| 830-974, gnl|oryCun1|scaffold_214327 (42881-42691) | |
| 830-974, gnl|panTro1|chr1 (206168697-206168890) | |
| 830-974, gnl|rheMac2|chr1 (144537488-144537294) | |
| 830-974, gnl|rn3|chr13 (96881428-96881240) | |
| 830-974, gnl|tetNig1|chrUn_random (47651222-47651038) | |
| 830-974, gnl|xenTro1|scaffold_215 (1590587-1590412) | |
| 836-969, gnl|bosTau2|chr10 (61972521-61972654) | |
| 836-969, gnl|canFam2|chr8 (53097887-53098046) | |
| 836-969, gnl|danRer3|chr17 (46162933-46162775) | |
| 836-969, gnl|dasNov1|scaffold_57004 (5534-5693) | |
| 836-969, gnl|echTel1|scaffold_177009 (73-225) | |
| 836-969, gnl|fr1|chrUn (34952038-34951880) | |
| 836-969, gnl|galGal2|chr5 (35970860-35971022) | |
| 836-969, gnl|hg17|chr14 (76778997-76779156) | |
| 836-969, gnl|Hg17|chr14 (76778998-76779131) | |
| 836-969, gnl|mm7|chr12 (85078183-85078342) | |
| 836-969, gnl|Mm7|chr12 (85078184-85078317) | |
| 836-969, gnl|monDom2|scaffold_8 (56257013-56256854) | |
| 836-969, gnl|oryCun1|scaffold_207183 (32302-32461) | |
| 836-969, gnl|panTro1|chr15 (76839529-76839688) | |
| 836-969, gnl|rheMac2|chr7 (140384766-140384925) | |
| 836-969, gnl|rn3|chr6 (111212173-111212332) | |
| 836-969, gnl|tetNig1|chr10 (4943906-4943748) | |
| 836-969, gnl|xenTro1|scaffold_1427 (80661-80502) | |
| 986-1094, gnl|bosTau2|chr16 (17234338-17234230) | |
| 986-1094, gnl|canFam2|chr7 (41929482-41929339) | |
| 986-1094, gnl|danRer3|chr13 (45660785-45660920) | |
| 986-1094, gnl|echTel1|scaffold_177009 (1653-1506) | |
| 986-1094, gnl|fr1|chrUn (117848398-117848259) | |
| 986-1094, gnl|galGal2|chr3 (13551915-13551793) | |
| 986-1094, gnl|hg17|chr1 (222351342-222351492) | |
| 986-1094, gnl|Hg17|chr1 (222351458-222351349) | |
| 986-1094, gnl|loxAfr1|scaffold_9215 (7778-7919) | |
| 986-1094, gnl|mm7|chr1 (180945301-180945160) | |
| 986-1094, gnl|Mm7|chr1 (180945184-180945292) | |
| 986-1094, gnl|monDom2|scaffold_13 (33433887-33434045) | |
| 986-1094, gnl|oryCun1|scaffold_191200 (8033-8159) | |
| 986-1094, gnl|panTro1|chr1 (206166424-206166574) | |
| 986-1094, gnl|rheMac2|chr1 (144539779-144539627) | |
| 986-1094, gnl|rn3|chr13 (96883186-96883045) | |
| 986-1094, gnl|tetNig1|chrUn_random (47651383-47651244) | |
| 986-1094, gnl|xenTro1|scaffold_215 (1591445-1591311) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.118301) |