Ss1.1-Utr1-UTR010054G07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCCAGCTGGAGAGTTGGGTCACTCCTGGTGTCACTCCACTGCCAGCGTGGGCACCGGGC ATCTGGTGGGGGCCAGCAGCTGCTCAGGCCCCCGGGAGGCTTGGCAGCCTGAGAGGCTGC GGAGAGACTTGGGCCAGGACCATAGTCGGAATATCTGGACGCAGAATGTCAGGCAAAGGG GAGCAGGGCCAAGCAGGAGGAAGGGCAGCCTGGCAGGTACTCAGGATGGACCCCTTCGCG GACACACTGCAGCGGCTGCGGGAGGCCTTCAGCTCGGGGCGCACGCGGCCGGCTGAGTTC CGGGCCACCCAGTTGAAGGGCCTGGGCCGCTTCCTGCAAGAGAACAAGCAGCTTCTGCAG GAGGCGCTGGCGCAGGACTTGCACAAGTCCACCTTCGAGTCACAGGTGTCTGAGATCAGC ATCAGCCAGAGCGAGATAAACTTGGCCCTTAGGAACCTGCGGGCCTGGATGAAGGATGAG AAAGTGTCCAAGAACCTGGCCACACAGCTGGACTCGGCCTTCATCCGGAAGGAGCCCTTC GGCCTGGTGCTCATCATCGCCCCGTGGAACTACCCTGTGAACCTGACTCTGATGCCCCTG GTGGGCGCCCTCGCCGCAGGGAACTGCGTGGTGCTGAAGCCCTCGGAGATCAGCAAGAGC ACTGAGAAGGTCCTGGCCGAGGTGCTGCCCCGATACCTGGACCAGAGCTGCTTTGCCGTG GTGCTGGGTGGCCCCGAGGAGACGGGGCAGCTGCTGGAGCACAAGTTTGACCACATCTTC TTCACGGGGAGCCCTCGAGTCGGCAAGATTGTCATGACTGCTGCCGCCAAGCACCTGACG CCCGTCACGCTGGAGCTGGGGGGCAAGAACCCCTGTTACGTGGACGACAACTGTGACCCC CAGACCGTGGCCAACCGCGTGGCCTGGTTCCGCTATCTCCATACCGGCCAGACCTGCGTG GCCCCCGACTACATCCTGTGCAGCCCAGAAACACAGGCGCGGCTGCTGCCCGCCCTGCAA AGCGCCATCACCCGTTTCTATGGCGACGACCCCCGGGCCTCCCCCGACCTGGGCCGCATC ATCAACCACAAACATTTCCAGCGGCTGCGGGGCCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCCAGCTGGAGAGTTGGGTCACTCCTGGTGTCACTCCACTGCCAGCGTGGGCACCGGGC ATCTGGTGGGGGCCAGCAGCTGCTCAGGCCCCCGGGAGGCTTGGCAGCCTGAGAGGCTGC GGAGAGACTTGGGCCAGGACCATAGTCGGAATATCTGGACGCAGAATGTCAGGCAAAGGG GAGCAGGGCCAAGCAGGAGGAAGGGCAGCCTGGCAGGTACTCAGGATGGACCCCTTCGCG GACACACTGCAGCGGCTGCGGGAGGCCTTCAGCTCGGGGCGCACGCGGCCGGCTGAGTTC CGGGCCACCCAGTTGAAGGGCCTGGGCCGCTTCCTGCAAGAGAACAAGCAGCTTCTGCAG GAGGCGCTGGCGCAGGACTTGCACAAGTCCACCTTCGAGTCACAGGTGTCTGAGATCAGC ATCAGCCAGAGCGAGATAAACTTGGCCCTTAGGAACCTGCGGGCCTGGATGAAGGATGAG AAAGTGTCCAAGAACCTGGCCACACAGCTGGACTCGGCCTTCATCCGGAAGGAGCCCTTC GGCCTGGTGCTCATCATCGCCCCGTGGAACTACCCTGTGAACCTGACTCTGATGCCCCTG GTGGGCGCCCTCGCCGCAGGGAACTGCGTGGTGCTGAAGCCCTCGGAGATCAGCAAGAGC ACTGAGAAGGTCCTGGCCGAGGTGCTGCCCCGATACCTGGACCAGAGCTGCTTTGCCGTG GTGCTGGGTGGCCCCGAGGAGACGGGGCAGCTGCTGGAGCACAAGTTTGACCACATCTTC TTCACGGGGAGCCCTCGAGTCGGCAAGATTGTCATGACTGCTGCCGCCAAGCACCTGACG CCCGTCACGCTGGAGCTGGGGGGCAAGAACCCCTGTTACGTGGACGACAACTGTGACCCC CAGACCGTGGCCAACCGCGTGGCCTGGTTCCGCTATCTCCATACCGGCCAGACCTGCGTG GCCCCCGACTACATCCTGTGCAGCCCAGAAACACAGGCGCGGCTGCTGCCCGCCCTGCAA AGCGCCATCACCCGTTTCTATGGCGACGACCCCCGGGCCTCCCCCGACCTGGGCCGCATC ATCAACCACAAACATTTCCAGCGGCTGCGGGGCCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 222-387, gnl|bosTau2|chr29 (39561713-39561878) | |
| 222-387, gnl|Hg17|chr11 (67191685-67191520) | |
| 222-387, gnl|Mm7|chr19 (3858642-3858807) | |
| 495-620, gnl|bosTau2|chr29 (39516629-39516504) | |
| 495-620, gnl|canFam2|chr18 (52836576-52836432) | |
| 495-620, gnl|danRer3|chrNA (245339638-245339500) | |
| 495-620, gnl|dasNov1|scaffold_60925 (1909-1770) | |
| 495-620, gnl|echTel1|scaffold_310868 (36534-36391) | |
| 495-620, gnl|fr1|chrUn (143645107-143645242) | |
| 495-620, gnl|galGal2|chr5 (31238-31379) | |
| 495-620, gnl|hg17|chr11 (67542806-67542949) | |
| 495-620, gnl|Hg17|chr11 (67542814-67542939) | |
| 495-620, gnl|loxAfr1|scaffold_78921 (9187-9044) | |
| 495-620, gnl|mm7|chr19 (3816413-3816273) | |
| 495-620, gnl|Mm7|chr19 (3816403-3816278) | |
| 495-620, gnl|monDom2|scaffold_226 (483798-483659) | |
| 495-620, gnl|rheMac2|chr14 (6702243-6702101) | |
| 495-620, gnl|rn3|chr1 (206600273-206600135) | |
| 495-620, gnl|tetNig1|chr7 (7531065-7530952) | |
| 495-620, gnl|xenTro1|scaffold_394 (39046-39188) | |
| 739-898, gnl|bosTau2|chr19 (24605880-24606039) | |
| 739-898, gnl|canFam2|chr5 (43471133-43470988) | |
| 739-898, gnl|danRer3|chr15 (25340371-25340507) | |
| 739-898, gnl|dasNov1|scaffold_60925 (949-1086) | |
| 739-898, gnl|echTel1|scaffold_310868 (35748-35884) | |
| 739-898, gnl|fr1|chrUn (256448604-256448745) | |
| 739-898, gnl|galGal2|chr19 (6417443-6417311) | |
| 739-898, gnl|hg17|chr17 (19585889-19586044) | |
| 739-898, gnl|Hg17|chr17 (19586084-19585925) | |
| 739-898, gnl|loxAfr1|scaffold_66538 (4395-4550) | |
| 739-898, gnl|mm7|chr11 (61296340-61296183) | |
| 739-898, gnl|Mm7|chr11 (61296141-61296300) | |
| 739-898, gnl|monDom2|scaffold_86 (4569121-4568971) | |
| 739-898, gnl|oryCun1|scaffold_79329 (191-76) | |
| 739-898, gnl|panTro1|chr19 (19914324-19914479) | |
| 739-898, gnl|rheMac2|chr16 (19258494-19258649) | |
| 739-898, gnl|rn3|chr10 (47384842-47384688) | |
| 739-898, gnl|tetNig1|chr16 (8362379-8362518) | |
| 739-898, gnl|xenTro1|scaffold_38 (1193349-1193504) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 222-387, gnl|bosTau2|chr29 (39561713-39561878) | |
| 222-387, gnl|Hg17|chr11 (67191685-67191520) | |
| 222-387, gnl|Mm7|chr19 (3858642-3858807) | |
| 495-620, gnl|bosTau2|chr29 (39516629-39516504) | |
| 495-620, gnl|canFam2|chr18 (52836576-52836432) | |
| 495-620, gnl|danRer3|chrNA (245339638-245339500) | |
| 495-620, gnl|dasNov1|scaffold_60925 (1909-1770) | |
| 495-620, gnl|echTel1|scaffold_310868 (36534-36391) | |
| 495-620, gnl|fr1|chrUn (143645107-143645242) | |
| 495-620, gnl|galGal2|chr5 (31238-31379) | |
| 495-620, gnl|hg17|chr11 (67542806-67542949) | |
| 495-620, gnl|Hg17|chr11 (67542814-67542939) | |
| 495-620, gnl|loxAfr1|scaffold_78921 (9187-9044) | |
| 495-620, gnl|mm7|chr19 (3816413-3816273) | |
| 495-620, gnl|Mm7|chr19 (3816403-3816278) | |
| 495-620, gnl|monDom2|scaffold_226 (483798-483659) | |
| 495-620, gnl|rheMac2|chr14 (6702243-6702101) | |
| 495-620, gnl|rn3|chr1 (206600273-206600135) | |
| 495-620, gnl|tetNig1|chr7 (7531065-7530952) | |
| 495-620, gnl|xenTro1|scaffold_394 (39046-39188) | |
| 739-898, gnl|bosTau2|chr19 (24605880-24606039) | |
| 739-898, gnl|canFam2|chr5 (43471133-43470988) | |
| 739-898, gnl|danRer3|chr15 (25340371-25340507) | |
| 739-898, gnl|dasNov1|scaffold_60925 (949-1086) | |
| 739-898, gnl|echTel1|scaffold_310868 (35748-35884) | |
| 739-898, gnl|fr1|chrUn (256448604-256448745) | |
| 739-898, gnl|galGal2|chr19 (6417443-6417311) | |
| 739-898, gnl|hg17|chr17 (19585889-19586044) | |
| 739-898, gnl|Hg17|chr17 (19586084-19585925) | |
| 739-898, gnl|loxAfr1|scaffold_66538 (4395-4550) | |
| 739-898, gnl|mm7|chr11 (61296340-61296183) | |
| 739-898, gnl|Mm7|chr11 (61296141-61296300) | |
| 739-898, gnl|monDom2|scaffold_86 (4569121-4568971) | |
| 739-898, gnl|oryCun1|scaffold_79329 (191-76) | |
| 739-898, gnl|panTro1|chr19 (19914324-19914479) | |
| 739-898, gnl|rheMac2|chr16 (19258494-19258649) | |
| 739-898, gnl|rn3|chr10 (47384842-47384688) | |
| 739-898, gnl|tetNig1|chr16 (8362379-8362518) | |
| 739-898, gnl|xenTro1|scaffold_38 (1193349-1193504) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pla (0.133672) | |
| cty (0.10408) |