Ss1.1-Utr1-UTR010054H05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATATCTACTGCTTCCATTTTTATTTGCAGGGTAATCATCCAGCTCAGTGGTGGATCTGG ACTTATTCCTGTCACTAGGAAGCAAACCTGAAGATTCTTCTTCTCTCTTTGGTATATCAT AGGAATCAACAGGCCTTCTGTACTGGTATATTTTGATGGATGTTTCCCTCTCTCTCTCCG TCTGGCGCATTTGCTCCTCAGCCTCCGCCTGGCGCTTCTGCTTCTCAGCTTCTGCCTGAC GCTGCTTCTGCTCCTGCTCTTCCTGATCCTGCTGCTCCTTCAGCTTCCTCTCCCTCTCAA GGGCGAGCTGTTCCTGCAGTGTCTTTCCCTGGTCCTCGTTCGCTCCTTCCTCCTGCTGCT GCTGCCCCGTCTCTTCTTCGGTGCGGGTTCCTTCCCTATCTCGGGACTTGGACTCCTCAC CCCGGGTGGCAATGGCAGGCTCCCGTGCGGCCAGAGAAATGCTGTTTGAGTTTAGGACCA TCAGTTCCTCGTTCAAGTACTTGGAATTCTCTCTCTCAGCCTCCTGCTTAGCCCTCTGCC ACTCTTCCCTTAGTTTCTCCTGCTCCCGTTGATATTTCTCCTGCAGCAGGCGGTCCTGCT CCTTCTGCCACCGCTCCTGCCGCTTCCGCTCCTCCTCCGGATCCCATGCCCAGCGACTCG GGGCACTGATGGTCGGGACCGGAAGATCAGGCACCACAGAATCGGAGCTTCCTTGTTCAA AAAATTGTGATCGCCTTTTTAAGTTTTTCAAAGAAATAGGTTCAGAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATATCTACTGCTTCCATTTTTATTTGCAGGGTAATCATCCAGCTCAGTGGTGGATCTGG ACTTATTCCTGTCACTAGGAAGCAAACCTGAAGATTCTTCTTCTCTCTTTGGTATATCAT AGGAATCAACAGGCCTTCTGTACTGGTATATTTTGATGGATGTTTCCCTCTCTCTCTCCG TCTGGCGCATTTGCTCCTCAGCCTCCGCCTGGCGCTTCTGCTTCTCAGCTTCTGCCTGAC GCTGCTTCTGCTCCTGCTCTTCCTGATCCTGCTGCTCCTTCAGCTTCCTCTCCCTCTCAA GGGCGAGCTGTTCCTGCAGTGTCTTTCCCTGGTCCTCGTTCGCTCCTTCCTCCTGCTGCT GCTGCCCCGTCTCTTCTTCGGTGCGGGTTCCTTCCCTATCTCGGGACTTGGACTCCTCAC CCCGGGTGGCAATGGCAGGCTCCCGTGCGGCCAGAGAAATGCTGTTTGAGTTTAGGACCA TCAGTTCCTCGTTCAAGTACTTGGAATTCTCTCTCTCAGCCTCCTGCTTAGCCCTCTGCC ACTCTTCCCTTAGTTTCTCCTGCTCCCGTTGATATTTCTCCTGCAGCAGGCGGTCCTGCT CCTTCTGCCACCGCTCCTGCCGCTTCCGCTCCTCCTCCGGATCCCATGCCCAGCGACTCG GGGCACTGATGGTCGGGACCGGAAGATCAGGCACCACAGAATCGGAGCTTCCTTGTTCAA AAAATTGTGATCGCCTTTTTAAGTTTTTCAAAGAAATAGGTTCAGAAG |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 190-489, gnl|bosTau2|chr12 (26570200-26570493) | |
| 190-489, gnl|Hg17|chr13 (75314092-75313763) | |
| 190-489, gnl|Mm7|chr14 (96335646-96335230) | |
| 580-685, gnl|bosTau2|chr12 (26575473-26575578) | |
| 580-685, gnl|canFam2|chr22 (32549666-32549855) | |
| 580-685, gnl|danRer3|chr11 (25276626-25276782) | |
| 580-685, gnl|dasNov1|scaffold_1431 (40960-40779) | |
| 580-685, gnl|echTel1|scaffold_298192 (15051-15237) | |
| 580-685, gnl|galGal2|chr1 (151581308-151581109) | |
| 580-685, gnl|hg17|chr13 (75312450-75312636) | |
| 580-685, gnl|Hg17|chr13 (75312633-75312528) | |
| 580-685, gnl|loxAfr1|scaffold_7424 (10388-10198) | |
| 580-685, gnl|mm7|chr14 (96333886-96334071) | |
| 580-685, gnl|Mm7|chr14 (96334068-96333963) | |
| 580-685, gnl|monDom2|scaffold_8 (12839532-12839724) | |
| 580-685, gnl|oryCun1|scaffold_181562 (6050-6236) | |
| 580-685, gnl|panTro1|chr14 (57895292-57895478) | |
| 580-685, gnl|rheMac2|chr17 (56290971-56291154) | |
| 580-685, gnl|rn3|chr15 (85928162-85928356) | |
| 580-685, gnl|tetNig1|chr2 (8139687-8139832) | |
| 580-685, gnl|xenTro1|scaffold_107 (138074-137889) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 190-489, gnl|bosTau2|chr12 (26570200-26570493) | |
| 190-489, gnl|Hg17|chr13 (75314092-75313763) | |
| 190-489, gnl|Mm7|chr14 (96335646-96335230) | |
| 580-685, gnl|bosTau2|chr12 (26575473-26575578) | |
| 580-685, gnl|canFam2|chr22 (32549666-32549855) | |
| 580-685, gnl|danRer3|chr11 (25276626-25276782) | |
| 580-685, gnl|dasNov1|scaffold_1431 (40960-40779) | |
| 580-685, gnl|echTel1|scaffold_298192 (15051-15237) | |
| 580-685, gnl|galGal2|chr1 (151581308-151581109) | |
| 580-685, gnl|hg17|chr13 (75312450-75312636) | |
| 580-685, gnl|Hg17|chr13 (75312633-75312528) | |
| 580-685, gnl|loxAfr1|scaffold_7424 (10388-10198) | |
| 580-685, gnl|mm7|chr14 (96333886-96334071) | |
| 580-685, gnl|Mm7|chr14 (96334068-96333963) | |
| 580-685, gnl|monDom2|scaffold_8 (12839532-12839724) | |
| 580-685, gnl|oryCun1|scaffold_181562 (6050-6236) | |
| 580-685, gnl|panTro1|chr14 (57895292-57895478) | |
| 580-685, gnl|rheMac2|chr17 (56290971-56291154) | |
| 580-685, gnl|rn3|chr15 (85928162-85928356) | |
| 580-685, gnl|tetNig1|chr2 (8139687-8139832) | |
| 580-685, gnl|xenTro1|scaffold_107 (138074-137889) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cki (0.165235) | |
| pla (0.133672) |