Non-Coding RNA Search

Ss1.1-Utr1-UTR010057A01.5

Sequence:


               
               GCGCGGTCAGGCTCTCGAGCTCTCGCACGAATTTTCTTGCGAGCTGCAAGTGGGGGCGCC
GCCGTCGCGGCTGAGGGGCCCAACTGCCTTTTGCAGCGCCCTTCGGCCACCGGCTGCAGC
CCTGCTTGGCTCCTACCCTTTAGGGTCAAGGGTCGCGGGCAGCGAAGCCCCAGGGGACCG
GGCAGCCCCGCGTCCCCGGAAGCGCTGGCTCTCGGGCTCGGGCTGCCGCGTTCCTGGCCG
GCGCGCTTGATCGCTCTGCGGCTCATGCCTCCCCGTCACTGGCGACCTGCCCCCGCCAGG
CCCGCTCCGGTCCCTGGAGACGCGAGCGACACCGGCCGCCGAGGGTACACTCCAAGGCAG
CAATCACCAACTATGACCTCTTGGGTTCCAAGGCTGCTTCCTAGGAATGTCCGATCCTTG
GCTGCCTCATCAGAGAACCAGCGAGTTGAGGATGGCCGACGGCACCAGGAGGCCTATGGG
TACTTCTTGCCCATCCAGACAAGGTGGCAGGACAATGACCAGTATGGCCACGTGAACAAT
GCCGTGTACTACAGCTACTTCGACACGATCATCAACCACTACCTGATCAGGTACTGTGGC
CTGAAAACGGGCTTGCGCACGTCCCCCACGGTGGGCTTCATGGTGACCAATCAGTGCACC
TTCCACACACCGGTGGGCTTTCCGCAGATCCCGGTGGCTGCGTTCGCCGTGGACAAAGTG
GGTCGCTCCAGCGTGCATTACCGCCTGGCTCTGTTTCCCCCCAAGCCCGCCGGAGACCTG
CCTGCTGTTGAGCACCGGGACTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGCGGTCAGGCTCTCGAGCTCTCGCACGAATTTTCTTGCGAGCTGCAAGTGGGGGCGCC
GCCGTCGCGGCTGAGGGGCCCAACTGCCTTTTGCAGCGCCCTTCGGCCACCGGCTGCAGC
CCTGCTTGGCTCCTACCCTTTAGGGTCAAGGGTCGCGGGCAGCGAAGCCCCAGGGGACCG
GGCAGCCCCGCGTCCCCGGAAGCGCTGGCTCTCGGGCTCGGGCTGCCGCGTTCCTGGCCG
GCGCGCTTGATCGCTCTGCGGCTCATGCCTCCCCGTCACTGGCGACCTGCCCCCGCCAGG
CCCGCTCCGGTCCCTGGAGACGCGAGCGACACCGGCCGCCGAGGGTACACTCCAAGGCAG
CAATCACCAACTATGACCTCTTGGGTTCCAAGGCTGCTTCCTAGGAATGTCCGATCCTTG
GCTGCCTCATCAGAGAACCAGCGAGTTGAGGATGGCCGACGGCACCAGGAGGCCTATGGG
TACTTCTTGCCCATCCAGACAAGGTGGCAGGACAATGACCAGTATGGCCACGTGAACAAT
GCCGTGTACTACAGCTACTTCGACACGATCATCAACCACTACCTGATCAGGTACTGTGGC
CTGAAAACGGGCTTGCGCACGTCCCCCACGGTGGGCTTCATGGTGACCAATCAGTGCACC
TTCCACACACCGGTGGGCTTTCCGCAGATCCCGGTGGCTGCGTTCGCCGTGGACAAAGTG
GGTCGCTCCAGCGTGCATTACCGCCTGGCTCTGTTTCCCCCCAAGCCCGCCGGAGACCTG
CCTGCTGTTGAGCACCGGGACTTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|34785574|gb|AAH57916.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|34785574|gb|AAH57916.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               120-347, gnl|bosTau2|chr15 (38086811-38086576)
               

               
               120-347, gnl|Hg17|chr11 (32312178-32311950)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               120-347, gnl|bosTau2|chr15 (38086811-38086576)
               

               
               120-347, gnl|Hg17|chr11 (32312178-32311950)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fce (0.271592)
               

               
               med (0.116252)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               med (0.116252)

	120-347, gnl\|bosTau2\|chr15 (38086811-38086576)
	120-347, gnl\|Hg17\|chr11 (32312178-32311950)