Ss1.1-Utr1-UTR010058D05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAAGATGCTTGGAAACAAAGTGTGGAAAGAAAATAATGCACAAGGACCCTGTTTTCAGAA TTGCCCCTAGAAGTAGAGATGCTCGTCCCAATCCAGAAGAGCCTGTAGATGAAGATGAAG ATGTTCAAGCAGAAAGAACAAGGACAGCCACCGCCCTGACCACATCCATAGAGGAGAAAC CAGTCGTAATTGCTAGCTGTCTACACAAAGAATATGCAGGCCAGAAGAAAAGTTGCTTTT CAAAGAGGAAGAAGAAAATAGCAGCAAGAAATATCTCCTTCTGTGTTAAAAAAGGTGAAA TTTTGGGATTGCTAGGACCTAACGGTGCTGGTAAAAGTTCGTCTATTAGAATGATATCTG GGGTCACCAAGCCCACGGCTGGAGAGGTAGAACTGACGGGCTACGGTTCCGGCCTGGGTC ATCGCGGGGACGGCAGGGTCCAGTTCCTGGGATACTGCCCTCAGGAGAACGTGCTGTGGC CTGTCCTGACAGCGAGGGAACACCTGGAGGTCTTCGCCGCTGTGAAAGGGCTGAGGAAAG CGGATGCCAACGTTGCCATTTCACGATTGGTGGACTCTTTCAAACTGCACGAACAGCTGA ATGTTCCAGTGCAGTACTTAACCGCCGGAGCTGCTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAAGATGCTTGGAAACAAAGTGTGGAAAGAAAATAATGCACAAGGACCCTGTTTTCAGAA TTGCCCCTAGAAGTAGAGATGCTCGTCCCAATCCAGAAGAGCCTGTAGATGAAGATGAAG ATGTTCAAGCAGAAAGAACAAGGACAGCCACCGCCCTGACCACATCCATAGAGGAGAAAC CAGTCGTAATTGCTAGCTGTCTACACAAAGAATATGCAGGCCAGAAGAAAAGTTGCTTTT CAAAGAGGAAGAAGAAAATAGCAGCAAGAAATATCTCCTTCTGTGTTAAAAAAGGTGAAA TTTTGGGATTGCTAGGACCTAACGGTGCTGGTAAAAGTTCGTCTATTAGAATGATATCTG GGGTCACCAAGCCCACGGCTGGAGAGGTAGAACTGACGGGCTACGGTTCCGGCCTGGGTC ATCGCGGGGACGGCAGGGTCCAGTTCCTGGGATACTGCCCTCAGGAGAACGTGCTGTGGC CTGTCCTGACAGCGAGGGAACACCTGGAGGTCTTCGCCGCTGTGAAAGGGCTGAGGAAAG CGGATGCCAACGTTGCCATTTCACGATTGGTGGACTCTTTCAAACTGCACGAACAGCTGA ATGTTCCAGTGCAGTACTTAACCGCCGGAGCTGCTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 175-296, gnl|bosTau2|chr19 (56001332-56001453) | |
| 175-296, gnl|canFam2|chr9 (18725785-18725931) | |
| 175-296, gnl|danRer3|chrNA (137359142-137359008) | |
| 175-296, gnl|dasNov1|scaffold_38244 (274-128) | |
| 175-296, gnl|echTel1|scaffold_233183 (717-862) | |
| 175-296, gnl|fr1|chrUn (140574081-140574223) | |
| 175-296, gnl|galGal2|chr18 (7749946-7750070) | |
| 175-296, gnl|hg17|chr17 (64594347-64594493) | |
| 175-296, gnl|Hg17|chr17 (64594473-64594352) | |
| 175-296, gnl|loxAfr1|scaffold_5588 (45691-45837) | |
| 175-296, gnl|mm7|chr11 (110296077-110296223) | |
| 175-296, gnl|Mm7|chr11 (110296203-110296082) | |
| 175-296, gnl|monDom2|scaffold_18 (22364867-22365010) | |
| 175-296, gnl|oryCun1|scaffold_185333 (5507-5364) | |
| 175-296, gnl|panTro1|chr19 (67898981-67899127) | |
| 175-296, gnl|rheMac2|chr16 (64346404-64346550) | |
| 175-296, gnl|rn3|chr10 (99650500-99650646) | |
| 175-296, gnl|tetNig1|chr2 (2114687-2114827) | |
| 175-296, gnl|xenTro1|scaffold_1549 (45792-45646) | |
| 385-565, gnl|bosTau2|chr19 (56003337-56003517) | |
| 385-565, gnl|canFam2|chr9 (18723591-18723713) | |
| 385-565, gnl|danRer3|chrNA (137359680-137359551) | |
| 385-565, gnl|dasNov1|scaffold_38244 (1809-1687) | |
| 385-565, gnl|echTel1|scaffold_277907 (103622-103740) | |
| 385-565, gnl|fr1|chrUn (140573662-140573777) | |
| 385-565, gnl|galGal2|chr18 (7749389-7749511) | |
| 385-565, gnl|hg17|chr17 (64592756-64592878) | |
| 385-565, gnl|Hg17|chr17 (64592920-64592764) | |
| 385-565, gnl|loxAfr1|scaffold_26522 (10741-10619) | |
| 385-565, gnl|mm7|chr11 (110293064-110293186) | |
| 385-565, gnl|Mm7|chr11 (110293249-110293072) | |
| 385-565, gnl|monDom2|scaffold_18 (22355498-22355620) | |
| 385-565, gnl|oryCun1|scaffold_204418 (291-388) | |
| 385-565, gnl|panTro1|chr19 (67897380-67897502) | |
| 385-565, gnl|rheMac2|chr16 (64344876-64344998) | |
| 385-565, gnl|rn3|chr10 (99647483-99647605) | |
| 385-565, gnl|tetNig1|chr2 (2114257-2114360) | |
| 385-565, gnl|xenTro1|scaffold_1549 (48578-48456) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 175-296, gnl|bosTau2|chr19 (56001332-56001453) | |
| 175-296, gnl|canFam2|chr9 (18725785-18725931) | |
| 175-296, gnl|danRer3|chrNA (137359142-137359008) | |
| 175-296, gnl|dasNov1|scaffold_38244 (274-128) | |
| 175-296, gnl|echTel1|scaffold_233183 (717-862) | |
| 175-296, gnl|fr1|chrUn (140574081-140574223) | |
| 175-296, gnl|galGal2|chr18 (7749946-7750070) | |
| 175-296, gnl|hg17|chr17 (64594347-64594493) | |
| 175-296, gnl|Hg17|chr17 (64594473-64594352) | |
| 175-296, gnl|loxAfr1|scaffold_5588 (45691-45837) | |
| 175-296, gnl|mm7|chr11 (110296077-110296223) | |
| 175-296, gnl|Mm7|chr11 (110296203-110296082) | |
| 175-296, gnl|monDom2|scaffold_18 (22364867-22365010) | |
| 175-296, gnl|oryCun1|scaffold_185333 (5507-5364) | |
| 175-296, gnl|panTro1|chr19 (67898981-67899127) | |
| 175-296, gnl|rheMac2|chr16 (64346404-64346550) | |
| 175-296, gnl|rn3|chr10 (99650500-99650646) | |
| 175-296, gnl|tetNig1|chr2 (2114687-2114827) | |
| 175-296, gnl|xenTro1|scaffold_1549 (45792-45646) | |
| 385-565, gnl|bosTau2|chr19 (56003337-56003517) | |
| 385-565, gnl|canFam2|chr9 (18723591-18723713) | |
| 385-565, gnl|danRer3|chrNA (137359680-137359551) | |
| 385-565, gnl|dasNov1|scaffold_38244 (1809-1687) | |
| 385-565, gnl|echTel1|scaffold_277907 (103622-103740) | |
| 385-565, gnl|fr1|chrUn (140573662-140573777) | |
| 385-565, gnl|galGal2|chr18 (7749389-7749511) | |
| 385-565, gnl|hg17|chr17 (64592756-64592878) | |
| 385-565, gnl|Hg17|chr17 (64592920-64592764) | |
| 385-565, gnl|loxAfr1|scaffold_26522 (10741-10619) | |
| 385-565, gnl|mm7|chr11 (110293064-110293186) | |
| 385-565, gnl|Mm7|chr11 (110293249-110293072) | |
| 385-565, gnl|monDom2|scaffold_18 (22355498-22355620) | |
| 385-565, gnl|oryCun1|scaffold_204418 (291-388) | |
| 385-565, gnl|panTro1|chr19 (67897380-67897502) | |
| 385-565, gnl|rheMac2|chr16 (64344876-64344998) | |
| 385-565, gnl|rn3|chr10 (99647483-99647605) | |
| 385-565, gnl|tetNig1|chr2 (2114257-2114360) | |
| 385-565, gnl|xenTro1|scaffold_1549 (48578-48456) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lun (0.150489) | |
| cty (0.10408) |