Non-Coding RNA Search

Ss1.1-Utr1-UTR010059D08.5

Sequence:


               
               TAATAAAAATTGAACCATGAACGTGCCCTCTCTACTAGAGAAAAGAGGCCCGCGAATGTC
TATAAGTCAGAGAAGGGAACATGGGTGAGGGAACAGGGCCTGTCCTCCCCCCCCCCGACT
CCACCCCTACCCCCAGCTGGGGCCACCATGCTGTTCTATCCACGTGTAGGGTCACTCGGA
CTAAATCTACACTAATTCCAAGTATTGGAACATTTGTGTGGTTTTTAAACTGTCAATCTC
GTAGTAACCTCCTACCACCAAAATAAAATAGCAAGAGAGACAGAAACTGCCAGTGTTGGC
CTCACAGAATTTAACTAGTTTCCTTTTGGGTTAGCTGTACCCCTGAATTTGTCTTTAACG
ATAGCTCTGCACACTAGGAAAAATGGTGCCGCCCTGACGCAAGGGTCTTTGCAAGATTCA
CTTGTTGGCTCTTTGCCGTGACAAGCGCCTGTCTTGTTCATGGGGGGGAGAAGGGGCAGG
TAAAGGCAAGAAGTGTTCTGTTTTAAATTAAATCAGTTTCATTTTCAAACTAGAAACCAT
GGCTTTGAAAGTAAATTCCCAATTGCAATTGGTACATTTTGAGCCAGTGTTAATAAACTG
GGATTGTTTTCTCAAGAAGTGAAATTCTTTGCTGCTCATGGTGAGAAACCACAGAGCAGC
TTCCAGCGTTGTGGTGAAGTGAAGGGCTTTCCTTCCCATCCTGTCCCCTGCCTCCCTGGG
CCTCCACTGCATCTGGCTTCCTTCTCCTTGGGCTCCTGAAAGGTGTGCTCGGGCTGGGTG
GTGAGGGGCGAAGGGAGGGGCAGGGCAGGAGGAAAGTAGCAGGTCCCGTGTGTGCTCGCC
AAAAATGCAAAAGGGGGCTGTGTATACAAAACTGAGCAAAAACCTTTGAAACCCTTAAAG
TTACATACCTTCTAAAGGTACTATAGTTTTTCACCAAGTGATGCATTCAGCATGACACTT
CTTAGCAGAAATTCCGGGTTAAGTTAGAATCAATGTGTTTAAAACACCCCCCCACCCCCT
TTTAAATTTTGTCCACGGAATTACTTACTTAAGTGTAGTATTTCTGAATGTGCCTTTGTG
AGCTCAGAGACCATCTGTTTTAGGAAGAACCTCTGCATTGGGAGAAAACAGGCGGTCAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAATAAAAATTGAACCATGAACGTGCCCTCTCTACTAGAGAAAAGAGGCCCGCGAATGTC
TATAAGTCAGAGAAGGGAACATGGGTGAGGGAACAGGGCCTGTCCTCCCCCCCCCCGACT
CCACCCCTACCCCCAGCTGGGGCCACCATGCTGTTCTATCCACGTGTAGGGTCACTCGGA
CTAAATCTACACTAATTCCAAGTATTGGAACATTTGTGTGGTTTTTAAACTGTCAATCTC
GTAGTAACCTCCTACCACCAAAATAAAATAGCAAGAGAGACAGAAACTGCCAGTGTTGGC
CTCACAGAATTTAACTAGTTTCCTTTTGGGTTAGCTGTACCCCTGAATTTGTCTTTAACG
ATAGCTCTGCACACTAGGAAAAATGGTGCCGCCCTGACGCAAGGGTCTTTGCAAGATTCA
CTTGTTGGCTCTTTGCCGTGACAAGCGCCTGTCTTGTTCATGGGGGGGAGAAGGGGCAGG
TAAAGGCAAGAAGTGTTCTGTTTTAAATTAAATCAGTTTCATTTTCAAACTAGAAACCAT
GGCTTTGAAAGTAAATTCCCAATTGCAATTGGTACATTTTGAGCCAGTGTTAATAAACTG
GGATTGTTTTCTCAAGAAGTGAAATTCTTTGCTGCTCATGGTGAGAAACCACAGAGCAGC
TTCCAGCGTTGTGGTGAAGTGAAGGGCTTTCCTTCCCATCCTGTCCCCTGCCTCCCTGGG
CCTCCACTGCATCTGGCTTCCTTCTCCTTGGGCTCCTGAAAGGTGTGCTCGGGCTGGGTG
GTGAGGGGCGAAGGGAGGGGCAGGGCAGGAGGAAAGTAGCAGGTCCCGTGTGTGCTCGCC
AAAAATGCAAAAGGGGGCTGTGTATACAAAACTGAGCAAAAACCTTTGAAACCCTTAAAG
TTACATACCTTCTAAAGGTACTATAGTTTTTCACCAAGTGATGCATTCAGCATGACACTT
CTTAGCAGAAATTCCGGGTTAAGTTAGAATCAATGTGTTTAAAACACCCCCCCACCCCCT
TTTAAATTTTGTCCACGGAATTACTTACTTAAGTGTAGTATTTCTGAATGTGCCTTTGTG
AGCTCAGAGACCATCTGTTTTAGGAAGAACCTCTGCATTGGGAGAAAACAGGCGGTCAGC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               828-1137, gnl|bosTau2|chr5 (70159877-70159563)
               

               
               828-1137, gnl|Hg17|chr22 (39050980-39051294)
               

               
               828-1137, gnl|Mm7|chr15 (81020967-81021252)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               828-1137, gnl|bosTau2|chr5 (70159877-70159563)
               

               
               828-1137, gnl|Hg17|chr22 (39050980-39051294)
               

               
               828-1137, gnl|Mm7|chr15 (81020967-81021252)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	828-1137, gnl\|bosTau2\|chr5 (70159877-70159563)
	828-1137, gnl\|Hg17\|chr22 (39050980-39051294)
	828-1137, gnl\|Mm7\|chr15 (81020967-81021252)