Ss1.1-Utr1-UTR010060B04.5
|
AAAGCAGTTAAGCTCAGTCGTGCAGGACAAGGACAAAGGACAAGGCTGTGGCCTTCTTTG
CTTGGTGCTGGTCCTACTCCTCTGACCTCCATACCCCTGGACTGCCCTGCCCACCTGGAC
ATGCAGAAGATAGCGCTAGAGCCCCTAGGGGGCTTTTCCTTTGAGAACTGCCAGAGAAAT
GCATCCTTGGAACGCGCCCTCCCTGGGTTCCGGGTCCCTCACGCACTCAAGACGGGGACC
ACCATTGCAGGTCTTGTATTCCAGGACGGGGTAATCCTGGGCGCGGATACGCGGGCCACT
AACGACTCGGTCGTGGCGGACAAGAGCTGCGAAAAGATCCACTTCATCGCCCCCAAAATC
TACTGCTGTGGGGCTGGAGTAGCCGCGGACGCCGAGATGACCACGCGGATGGCGGCATCC
AACATAGAGCTACACGCACTATCCACCGGCCGCGAGCCGCGCGTGGCCACTGTCACTCGC
ATGTTACGCCAGAAGCTCTTCCGGTACCAGGGCCATGTGGGCGCGTCGCTAATCGTGGGC
GGCATAGACTTCACAGGACCCCAGCTCTACAGCGTGCACCCCCATGGGTCCTACAGCCGT
CTGCCCTTCACGGCCCTAGGCTCCGGCCAAGATGCAGCCCTGGCAGTGCTAGAAGACCGG
TTCCAGCCCAACATGACTCTGGAGGCAGCACAGGGGCTGCTGGTGGAAGCCATTACTGCA
GGGATCCTAAGTGACCTGGGCTCTGGGGGCAATGTGGATGCATGTGTGATCATGGGGACC
GGTGCCAAGCTGCTGCGAACACTGAGCTCTCCCACAAAGCCCACAGAAAGATCCAGCCAG
TATCGCTTTGCCCCTGGGACCACAGCTGTCCTGTCCCAGACAGTGATGCCGCTGACCCTG
GAGCTGGTGGAAGAAACTGTGCAGGCCATGGATGTGGAGTGAAGTAAGCCTAGGCTTACT
TGGAATAAGGAACAAGGAGGAATAAACCCAGAAAACACCAACATAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAAGCAGTTAAGCTCAGTCGTGCAGGACAAGGACAAAGGACAAGGCTGTGGCCTTCTTTG
CTTGGTGCTGGTCCTACTCCTCTGACCTCCATACCCCTGGACTGCCCTGCCCACCTGGAC
ATGCAGAAGATAGCGCTAGAGCCCCTAGGGGGCTTTTCCTTTGAGAACTGCCAGAGAAAT
GCATCCTTGGAACGCGCCCTCCCTGGGTTCCGGGTCCCTCACGCACTCAAGACGGGGACC
ACCATTGCAGGTCTTGTATTCCAGGACGGGGTAATCCTGGGCGCGGATACGCGGGCCACT
AACGACTCGGTCGTGGCGGACAAGAGCTGCGAAAAGATCCACTTCATCGCCCCCAAAATC
TACTGCTGTGGGGCTGGAGTAGCCGCGGACGCCGAGATGACCACGCGGATGGCGGCATCC
AACATAGAGCTACACGCACTATCCACCGGCCGCGAGCCGCGCGTGGCCACTGTCACTCGC
ATGTTACGCCAGAAGCTCTTCCGGTACCAGGGCCATGTGGGCGCGTCGCTAATCGTGGGC
GGCATAGACTTCACAGGACCCCAGCTCTACAGCGTGCACCCCCATGGGTCCTACAGCCGT
CTGCCCTTCACGGCCCTAGGCTCCGGCCAAGATGCAGCCCTGGCAGTGCTAGAAGACCGG
TTCCAGCCCAACATGACTCTGGAGGCAGCACAGGGGCTGCTGGTGGAAGCCATTACTGCA
GGGATCCTAAGTGACCTGGGCTCTGGGGGCAATGTGGATGCATGTGTGATCATGGGGACC
GGTGCCAAGCTGCTGCGAACACTGAGCTCTCCCACAAAGCCCACAGAAAGATCCAGCCAG
TATCGCTTTGCCCCTGGGACCACAGCTGTCCTGTCCCAGACAGTGATGCCGCTGACCCTG
GAGCTGGTGGAAGAAACTGTGCAGGCCATGGATGTGGAGTGAAGTAAGCCTAGGCTTACT
TGGAATAAGGAACAAGGAGGAATAAACCCAGAAAACACCAACATAAAA
|
|
gi|57087379|ref|XP_546869.1| |
Protein identifier
|
gi|57087379|ref|XP_546869.1| |
|
363-505, gnl|bosTau2|chr18 (14938278-14938420) |
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363-505, gnl|canFam2|chr5 (84569765-84569604) |
|
363-505, gnl|danRer3|chr20 (5841975-5842137) |
|
363-505, gnl|dasNov1|scaffold_19313 (45988-46150) |
|
363-505, gnl|echTel1|scaffold_317938 (72457-72296) |
|
363-505, gnl|fr1|chrUn (238890155-238890307) |
|
363-505, gnl|hg17|chr16 (66527358-66527519) |
|
363-505, gnl|Hg17|chr16 (66527507-66527365) |
|
363-505, gnl|loxAfr1|scaffold_1844 (29721-29566) |
|
363-505, gnl|mm7|chr8 (104536087-104536249) |
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363-505, gnl|Mm7|chr8 (104536236-104536094) |
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363-505, gnl|monDom2|scaffold_23 (18225420-18225259) |
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363-505, gnl|oryCun1|scaffold_204307 (33068-32906) |
|
363-505, gnl|rheMac2|chr20 (66270981-66271142) |
|
363-505, gnl|rn3|chr19 (35784173-35784335) |
|
363-505, gnl|tetNig1|chrUn_random (47270335-47270489) |
| |
|
829-1003, gnl|bosTau2|chr18 (14939881-14940051) |
|
829-1003, gnl|Hg17|chr16 (66526077-66525917) |
|
829-1003, gnl|Mm7|chr8 (104534762-104534592) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
363-505, gnl|bosTau2|chr18 (14938278-14938420) |
|
363-505, gnl|canFam2|chr5 (84569765-84569604) |
|
363-505, gnl|danRer3|chr20 (5841975-5842137) |
|
363-505, gnl|dasNov1|scaffold_19313 (45988-46150) |
|
363-505, gnl|echTel1|scaffold_317938 (72457-72296) |
|
363-505, gnl|fr1|chrUn (238890155-238890307) |
|
363-505, gnl|hg17|chr16 (66527358-66527519) |
|
363-505, gnl|Hg17|chr16 (66527507-66527365) |
|
363-505, gnl|loxAfr1|scaffold_1844 (29721-29566) |
|
363-505, gnl|mm7|chr8 (104536087-104536249) |
|
363-505, gnl|Mm7|chr8 (104536236-104536094) |
|
363-505, gnl|monDom2|scaffold_23 (18225420-18225259) |
|
363-505, gnl|oryCun1|scaffold_204307 (33068-32906) |
|
363-505, gnl|rheMac2|chr20 (66270981-66271142) |
|
363-505, gnl|rn3|chr19 (35784173-35784335) |
|
363-505, gnl|tetNig1|chrUn_random (47270335-47270489) |
| |
|
829-1003, gnl|bosTau2|chr18 (14939881-14940051) |
|
829-1003, gnl|Hg17|chr16 (66526077-66525917) |
|
829-1003, gnl|Mm7|chr8 (104534762-104534592) |
|
cag (0.453583) |
|
cly (0.361925) |
|
ill (0.351185) |
|
ece (0.229305) |
|
mas (0.210305) |
|
nlu (0.191681) |
|
fbs (0.175346) |
|
duo (0.172801) |
|
nco (0.161734) |
|
csp (0.161186) |
|
lnt (0.142308) |
|
cov (0.132153) |
|
cty (0.10408) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
|
eje (0.0988338) |
|
cag (0.453583) |
|
cly (0.361925) |
|
ill (0.351185) |
|
ece (0.229305) |
|
mas (0.210305) |
|
nlu (0.191681) |
|
fbs (0.175346) |
|
duo (0.172801) |
|
nco (0.161734) |
|
csp (0.161186) |
|
lnt (0.142308) |
|
cov (0.132153) |
|
cty (0.10408) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
|
eje (0.0988338) |
