Non-Coding RNA Search

Ss1.1-Utr1-UTR010063D08.5

Sequence:


               
               ACCCTCGTCTCCCACTCCAGTGACAGGAAGCCACCAGCGAGGAGGTCTGAACACTTGCAT
GCATGTTACCACAGGGGCAGAACTGTTCTTAATAACGGATCTTCTGGAAAAGTAAACCCA
TTACCAGCCCTGGTGGGGGTCGGGAGTGGGAGAGACCCCTGCTTCCGTCTTGTCTGCAGG
CTGCTCTGTTCCAGCAAAGGGGGCTCCTCCGATAAGCAGTGTGCATGGAGGTGGGGGAGG
GGGCTGGATGCCCAGCAGGGGCCAGAGGCATCCTTTCTGCTTCATCCGTACCTGCCTCCC
ATTCAGATTTCGATGGGGCGGCCACGCTTATTTGCATTGCTTGGTTAGAAGAGAGGAATG
GTCTGGAGCCGAGAGGAAGCAACTCCTGACAGGGTGTATCCTCCTGAGGCGCACACCCCA
AGCAAGCCCTGTGTGTCAGCCCTTACCCTGTGGAGAACCAGACTGTCGCAAGCTGCTTGC
AGTGGCTTATGTGCTCCACCCAAATAATTAAACACTCCTCACAGAAGGTTCTGGTAAACA
CTGCTGTGAAATTTGCTAGGTAGACAGTTTAAAGAGCCAGATTTCTTCACGCTTAAGTGA
GGCAGTTGGACTGGAAATAGTTAATAGTGTACTCGGTTCTGTGCCAGGGACCAGCAGACC
CCCACTTGTACCCCCAGAGCCTTAGAAACCTCGCGTCCAGTAGGGGGCGGGGGCAATCGC
GGGAGGGCAGACTGCCCTGCAAAACTGTGCATAATGTAGAAAACCTCTCTCTACGTGTGG
ATCTTTCTTTATGGCTTTAGAATCCTGAGACTCCTATTAAATTTGCACATCTCCCAGGTT
CTAAACTCCTGCTCCTGCTTTCCTCACCCACAGATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCCTCGTCTCCCACTCCAGTGACAGGAAGCCACCAGCGAGGAGGTCTGAACACTTGCAT
GCATGTTACCACAGGGGCAGAACTGTTCTTAATAACGGATCTTCTGGAAAAGTAAACCCA
TTACCAGCCCTGGTGGGGGTCGGGAGTGGGAGAGACCCCTGCTTCCGTCTTGTCTGCAGG
CTGCTCTGTTCCAGCAAAGGGGGCTCCTCCGATAAGCAGTGTGCATGGAGGTGGGGGAGG
GGGCTGGATGCCCAGCAGGGGCCAGAGGCATCCTTTCTGCTTCATCCGTACCTGCCTCCC
ATTCAGATTTCGATGGGGCGGCCACGCTTATTTGCATTGCTTGGTTAGAAGAGAGGAATG
GTCTGGAGCCGAGAGGAAGCAACTCCTGACAGGGTGTATCCTCCTGAGGCGCACACCCCA
AGCAAGCCCTGTGTGTCAGCCCTTACCCTGTGGAGAACCAGACTGTCGCAAGCTGCTTGC
AGTGGCTTATGTGCTCCACCCAAATAATTAAACACTCCTCACAGAAGGTTCTGGTAAACA
CTGCTGTGAAATTTGCTAGGTAGACAGTTTAAAGAGCCAGATTTCTTCACGCTTAAGTGA
GGCAGTTGGACTGGAAATAGTTAATAGTGTACTCGGTTCTGTGCCAGGGACCAGCAGACC
CCCACTTGTACCCCCAGAGCCTTAGAAACCTCGCGTCCAGTAGGGGGCGGGGGCAATCGC
GGGAGGGCAGACTGCCCTGCAAAACTGTGCATAATGTAGAAAACCTCTCTCTACGTGTGG
ATCTTTCTTTATGGCTTTAGAATCCTGAGACTCCTATTAAATTTGCACATCTCCCAGGTT
CTAAACTCCTGCTCCTGCTTTCCTCACCCACAGATT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               41-163, gnl|bosTau2|chr6 (30054420-30054296)
               


               
               238-875, gnl|bosTau2|chr6 (30054286-30053636)
               

               
               238-875, gnl|Hg17|chr4 (38509178-38509765)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               41-163, gnl|bosTau2|chr6 (30054420-30054296)
               


               
               238-875, gnl|bosTau2|chr6 (30054286-30053636)
               

               
               238-875, gnl|Hg17|chr4 (38509178-38509765)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pla (0.133672)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	41-163, gnl\|bosTau2\|chr6 (30054420-30054296)

	238-875, gnl\|bosTau2\|chr6 (30054286-30053636)
	238-875, gnl\|Hg17\|chr4 (38509178-38509765)