Ss1.1-Utr1-UTR010068D02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTGCAGCCCCGGGCTCCCGCGACTGCTCCTTCCAGCCTCTTGGGACCTTGGCTCGCGTT TACACACTGAGCTGCTGGCACAGGTTGTCAGGCGATGCGACTCGGCTGCTTTCCACGAGG AACTTAACCCGTCGCACCTGCCGCCCGGATGGGACCGCCAGAGAGCTTTCAAATCTTGAG TGAAAATTGAATTGCTGAGGAATTTGGGAAGAGAAAACCTGAAGTTCCCAGTCCATGGAT CCCTTGGGTGCACCTTCTCAGTTTGTGGATGTGGATACACTGCCAAGCTGGGGCAGCTCA TGTGACGATCAGTTAAATGCTTCCAATACAGCAGCTGACACGTATCATGAAGAGACTATT AGATCACCTTTTCTTTATAATAAGGATATCAATGGAAAAGTGGTTCTTTGGAAAGGAGAT GTTGCACTGCTGAACTGTACAGCTATTGTGAATACTAGCAATGAAAGTCTTACAGATAAG AATCCTGTGTCAGAAAGTATCTTCATGCTTGCAGGGCCTGATTTGAAGGAGGACCTCCAG AAACTTAAAGGTTGCCGGACAGGTGAAGCAAAATTGACAAAAGGATTTAATCTAGCTGCA AGGTTCATCATTCACACAGTAGGACCTAAATATAAGAGCCGCTATCGCACCGCCGCTGAG AGTTCCCTGTACAGCTGCTACAGAAATGTACTTCAGCTGGCAAAGGAACAGTCAATGTCT TCTGTTGGATTCTGTGTCATCAATTCTGCAAAACGAGGTTATCCTTTAGAGGATGCAACA CACATAGCACTTCGCACTGTAAGACGCTTCCTTGAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTGCAGCCCCGGGCTCCCGCGACTGCTCCTTCCAGCCTCTTGGGACCTTGGCTCGCGTT TACACACTGAGCTGCTGGCACAGGTTGTCAGGCGATGCGACTCGGCTGCTTTCCACGAGG AACTTAACCCGTCGCACCTGCCGCCCGGATGGGACCGCCAGAGAGCTTTCAAATCTTGAG TGAAAATTGAATTGCTGAGGAATTTGGGAAGAGAAAACCTGAAGTTCCCAGTCCATGGAT CCCTTGGGTGCACCTTCTCAGTTTGTGGATGTGGATACACTGCCAAGCTGGGGCAGCTCA TGTGACGATCAGTTAAATGCTTCCAATACAGCAGCTGACACGTATCATGAAGAGACTATT AGATCACCTTTTCTTTATAATAAGGATATCAATGGAAAAGTGGTTCTTTGGAAAGGAGAT GTTGCACTGCTGAACTGTACAGCTATTGTGAATACTAGCAATGAAAGTCTTACAGATAAG AATCCTGTGTCAGAAAGTATCTTCATGCTTGCAGGGCCTGATTTGAAGGAGGACCTCCAG AAACTTAAAGGTTGCCGGACAGGTGAAGCAAAATTGACAAAAGGATTTAATCTAGCTGCA AGGTTCATCATTCACACAGTAGGACCTAAATATAAGAGCCGCTATCGCACCGCCGCTGAG AGTTCCCTGTACAGCTGCTACAGAAATGTACTTCAGCTGGCAAAGGAACAGTCAATGTCT TCTGTTGGATTCTGTGTCATCAATTCTGCAAAACGAGGTTATCCTTTAGAGGATGCAACA CACATAGCACTTCGCACTGTAAGACGCTTCCTTGAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 1-167, gnl|bosTau2|chr3 (21275166-21275001) | |
| 1-167, gnl|Hg17|chr1 (118184277-118184113) | |
| 1-167, gnl|Mm7|chr3 (99957321-99957482) | |
| 179-414, gnl|bosTau2|chr3 (21265079-21264844) | |
| 179-414, gnl|Hg17|chr1 (118175078-118174843) | |
| 179-414, gnl|Mm7|chr3 (99964764-99964996) | |
| 549-705, gnl|bosTau2|chr3 (21254321-21254165) | |
| 549-705, gnl|canFam2|chr17 (58276974-58277160) | |
| 549-705, gnl|danRer3|chr9 (14356363-14356528) | |
| 549-705, gnl|dasNov1|scaffold_201487 (4442-4256) | |
| 549-705, gnl|echTel1|scaffold_314750 (43594-43780) | |
| 549-705, gnl|fr1|chrUn (78194290-78194455) | |
| 549-705, gnl|galGal2|chr1 (73157497-73157329) | |
| 549-705, gnl|hg17|chr1 (118167171-118167357) | |
| 549-705, gnl|Hg17|chr1 (118167349-118167193) | |
| 549-705, gnl|mm7|chr3 (99972828-99972652) | |
| 549-705, gnl|Mm7|chr3 (99972658-99972814) | |
| 549-705, gnl|monDom2|scaffold_82 (4422554-4422737) | |
| 549-705, gnl|oryCun1|scaffold_197074 (2180-1994) | |
| 549-705, gnl|panTro1|chr1 (118009266-118009452) | |
| 549-705, gnl|rn3|chr2 (195098241-195098065) | |
| 549-705, gnl|tetNig1|chrUn_random (114819079-114819238) | |
| 549-705, gnl|xenTro1|scaffold_905 (371815-371636) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-167, gnl|bosTau2|chr3 (21275166-21275001) | |
| 1-167, gnl|Hg17|chr1 (118184277-118184113) | |
| 1-167, gnl|Mm7|chr3 (99957321-99957482) | |
| 179-414, gnl|bosTau2|chr3 (21265079-21264844) | |
| 179-414, gnl|Hg17|chr1 (118175078-118174843) | |
| 179-414, gnl|Mm7|chr3 (99964764-99964996) | |
| 549-705, gnl|bosTau2|chr3 (21254321-21254165) | |
| 549-705, gnl|canFam2|chr17 (58276974-58277160) | |
| 549-705, gnl|danRer3|chr9 (14356363-14356528) | |
| 549-705, gnl|dasNov1|scaffold_201487 (4442-4256) | |
| 549-705, gnl|echTel1|scaffold_314750 (43594-43780) | |
| 549-705, gnl|fr1|chrUn (78194290-78194455) | |
| 549-705, gnl|galGal2|chr1 (73157497-73157329) | |
| 549-705, gnl|hg17|chr1 (118167171-118167357) | |
| 549-705, gnl|Hg17|chr1 (118167349-118167193) | |
| 549-705, gnl|mm7|chr3 (99972828-99972652) | |
| 549-705, gnl|Mm7|chr3 (99972658-99972814) | |
| 549-705, gnl|monDom2|scaffold_82 (4422554-4422737) | |
| 549-705, gnl|oryCun1|scaffold_197074 (2180-1994) | |
| 549-705, gnl|panTro1|chr1 (118009266-118009452) | |
| 549-705, gnl|rn3|chr2 (195098241-195098065) | |
| 549-705, gnl|tetNig1|chrUn_random (114819079-114819238) | |
| 549-705, gnl|xenTro1|scaffold_905 (371815-371636) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pro (0.512033) | |
| ill (0.175593) |