Ss1.1-Utr1-UTR010069G12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCACCAGCAGCATCACCAGCATCACCAGCACCAGCAGCATCACCAGCACCAGCAGCATC ACCAGCATCACCAGCACCAGCAGCATCACCAGCATCACCAGCACCAGTAGCATCACCAGC ACCACCAGCATCACCAGCACCACCAGCACCACCAGCATCACCAGCACCACCAGCATCATG CTATCACTGCTCAAGACAAAGGGAGCCTTTGACACCTTCACTTCAAAGGGCATCATTATC CCCAAGGGAGGAAAACCTCAACACGCCTACCAAAAAGAAGATAACCTGCAGGACCGTCTG CAAAGAGAAGCCACCGTTCTTGGAACCATCCAGATCATGTGTTGCCTGGTGATTTCAAGT GTGGGAGCCACTTTGGTTTCAGCTCCCCACTCTCCCCGCTTCAGTCCAGCAGTTTCCACC ATTCTGATGTCCGGGTACCCATTTTTAGGAGCTCTGTGTTTTGCCATTACCGGATCCCTT TCAATTATCTCTGGAAAAAAATCAACTAAGCCCTTTGCCACAAGCAGCCTGACCTCAAAT GCCGTGAGCTCTGTGGCTGCTGGAGCAGGCCTCCTCCTCCTCATGGACAGCCTGGTAGCC CTGGGGACTGCCTCTCAGCAGTGTGACTCAGAAAAGGATTATCTATCCTCCTTGCCTTAT TCGGAGTACTATTATTCAACAGTCAAGGACTGTCTTCTGACCAGTGCCAGTCTAACAGGT GCTCTGGTGGTGATGCTTATCTTCACGGTGCTGGAGCTCTTACTGTCCGCATATGCTTCT ATCTTATGGTGGAAACAGGTCTACTCCAACAACCCTGGGTGTGCATTCTCCTTGTCTCAG TCATGAGATCATATCCAACATGGCAAAAAGAGTTCAAGGTCACAGATACGAATAACTCTT GGCCTTAGAGGATGAAGGAGGAGAAACCTAGTGTTCATGGCAACATGTGATTAGACTCTC CTGAATTTTCAGCTCCTTTAGCCACTGAAAGAAACATTAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCACCAGCAGCATCACCAGCATCACCAGCACCAGCAGCATCACCAGCACCAGCAGCATC ACCAGCATCACCAGCACCAGCAGCATCACCAGCATCACCAGCACCAGTAGCATCACCAGC ACCACCAGCATCACCAGCACCACCAGCACCACCAGCATCACCAGCACCACCAGCATCATG CTATCACTGCTCAAGACAAAGGGAGCCTTTGACACCTTCACTTCAAAGGGCATCATTATC CCCAAGGGAGGAAAACCTCAACACGCCTACCAAAAAGAAGATAACCTGCAGGACCGTCTG CAAAGAGAAGCCACCGTTCTTGGAACCATCCAGATCATGTGTTGCCTGGTGATTTCAAGT GTGGGAGCCACTTTGGTTTCAGCTCCCCACTCTCCCCGCTTCAGTCCAGCAGTTTCCACC ATTCTGATGTCCGGGTACCCATTTTTAGGAGCTCTGTGTTTTGCCATTACCGGATCCCTT TCAATTATCTCTGGAAAAAAATCAACTAAGCCCTTTGCCACAAGCAGCCTGACCTCAAAT GCCGTGAGCTCTGTGGCTGCTGGAGCAGGCCTCCTCCTCCTCATGGACAGCCTGGTAGCC CTGGGGACTGCCTCTCAGCAGTGTGACTCAGAAAAGGATTATCTATCCTCCTTGCCTTAT TCGGAGTACTATTATTCAACAGTCAAGGACTGTCTTCTGACCAGTGCCAGTCTAACAGGT GCTCTGGTGGTGATGCTTATCTTCACGGTGCTGGAGCTCTTACTGTCCGCATATGCTTCT ATCTTATGGTGGAAACAGGTCTACTCCAACAACCCTGGGTGTGCATTCTCCTTGTCTCAG TCATGAGATCATATCCAACATGGCAAAAAGAGTTCAAGGTCACAGATACGAATAACTCTT GGCCTTAGAGGATGAAGGAGGAGAAACCTAGTGTTCATGGCAACATGTGATTAGACTCTC CTGAATTTTCAGCTCCTTTAGCCACTGAAAGAAACATTAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 152-324, gnl|bosTau2|chr15 (52114413-52114247) | |
| 152-324, gnl|Hg17|chr11 (59907174-59907337) | |
| 152-324, gnl|Mm7|chr19 (11013495-11013332) | |
| 517-718, gnl|bosTau2|chr15 (52104898-52104691) | |
| 517-718, gnl|canFam2|chr21 (53832365-53832590) | |
| 517-718, gnl|canFam2|chr21 (53832361-53832550) | |
| 517-718, gnl|dasNov1|scaffold_33611 (4406-4631) | |
| 517-718, gnl|dasNov1|scaffold_33611 (4402-4591) | |
| 517-718, gnl|echTel1|scaffold_324726 (44240-44456) | |
| 517-718, gnl|echTel1|scaffold_324726 (44236-44416) | |
| 517-718, gnl|hg17|chr11 (59913434-59913659) | |
| 517-718, gnl|Hg17|chr11 (59913439-59913646) | |
| 517-718, gnl|hg17|chr6 (29583213-29583398) | |
| 517-718, gnl|loxAfr1|scaffold_19436 (17057-17276) | |
| 517-718, gnl|loxAfr1|scaffold_33396 (16534-16354) | |
| 517-718, gnl|mm7|chr19 (11004760-11004535) | |
| 517-718, gnl|mm7|chr19 (11270323-11270141) | |
| 517-718, gnl|Mm7|chr19 (11004753-11004546) | |
| 517-718, gnl|oryCun1|scaffold_193038 (92515-92293) | |
| 517-718, gnl|oryCun1|scaffold_193038 (92512-92333) | |
| 517-718, gnl|panTro1|chr5 (30103111-30103296) | |
| 517-718, gnl|panTro1|chr9 (60820294-60820519) | |
| 517-718, gnl|rheMac2|chr14 (13666153-13665928) | |
| 517-718, gnl|rheMac2|chr4 (29221507-29221692) | |
| 517-718, gnl|rn3|chr1 (213992244-213992019) | |
| 517-718, gnl|rn3|chr1 (214369916-214369745) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 152-324, gnl|bosTau2|chr15 (52114413-52114247) | |
| 152-324, gnl|Hg17|chr11 (59907174-59907337) | |
| 152-324, gnl|Mm7|chr19 (11013495-11013332) | |
| 517-718, gnl|bosTau2|chr15 (52104898-52104691) | |
| 517-718, gnl|canFam2|chr21 (53832365-53832590) | |
| 517-718, gnl|canFam2|chr21 (53832361-53832550) | |
| 517-718, gnl|dasNov1|scaffold_33611 (4406-4631) | |
| 517-718, gnl|dasNov1|scaffold_33611 (4402-4591) | |
| 517-718, gnl|echTel1|scaffold_324726 (44240-44456) | |
| 517-718, gnl|echTel1|scaffold_324726 (44236-44416) | |
| 517-718, gnl|hg17|chr11 (59913434-59913659) | |
| 517-718, gnl|Hg17|chr11 (59913439-59913646) | |
| 517-718, gnl|hg17|chr6 (29583213-29583398) | |
| 517-718, gnl|loxAfr1|scaffold_19436 (17057-17276) | |
| 517-718, gnl|loxAfr1|scaffold_33396 (16534-16354) | |
| 517-718, gnl|mm7|chr19 (11004760-11004535) | |
| 517-718, gnl|mm7|chr19 (11270323-11270141) | |
| 517-718, gnl|Mm7|chr19 (11004753-11004546) | |
| 517-718, gnl|oryCun1|scaffold_193038 (92515-92293) | |
| 517-718, gnl|oryCun1|scaffold_193038 (92512-92333) | |
| 517-718, gnl|panTro1|chr5 (30103111-30103296) | |
| 517-718, gnl|panTro1|chr9 (60820294-60820519) | |
| 517-718, gnl|rheMac2|chr14 (13666153-13665928) | |
| 517-718, gnl|rheMac2|chr4 (29221507-29221692) | |
| 517-718, gnl|rn3|chr1 (213992244-213992019) | |
| 517-718, gnl|rn3|chr1 (214369916-214369745) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eye (0.170503) | |
| ute (0.132784) | |
| jca (0.11396) |