Ss1.1-Utr1-UTR010075B07.5
|
TTAGTGTATGTGCGCGGGAGGTCATCTGACTTGGCCCTGGCTGCATCCCGCGACGTGGGC
GTCTCGCTGCACCTTGTCTCCAGACAGGTGAGTCAGGGCCACCCCTCTGTCCTTGGGGCC
TGGAGCCGCCTCAGCCACTGGCTGAGGCTATGGCATTGCTGGCAGGGGGTCGCTGGGACT
CCAGGATCCTCCTCTTGAATTCCTCCAGGGTAGCTGAGTCGATCGGAGGGGGGTTGGGGA
CAGGGCCCACAGGTCTTGGCCCAGGTATCGGCTGAGACTTGGCCTTGATGCAGGTGTCCA
GTGCCGATTTGCTGATGGCCAGCTCCATCTTGAGCTGCTCAATCTCCCGCTTCTTCTCCT
CCAGCTCCTTGGCCAGGTTGTCCTTCTCCTTCCGCAGAGCTGCCTTCTCCTCCAGGGCCA
GCTGCGTCTGCCGGGTACATTCAGCCTGCAGCTTGGCTTCCCGGGCCTGGGCCTCCTTCT
CCACCTTCTCCTTGGCCTCCTGAGTGGCTTGCAGGCCCTGCTGGACCTCCAGCTTCTGGC
GCTGGAGATCCGAATTCTCTCGGGTCACACGCTCGATGCCGGCCCGCAGGCTCCGGGCCA
TCTCCTCCACCTTGGCGCTCATGAGGGTAGGCATGTGGTCACAGGTTCTCCGGATGGAGG
CCAGTTCCGAGCCGAGGGGATGGTACATATTGTAGCCCAGGCTGTCGAGGGATCTCGAGA
TGATGGAGTCCCTCCACAGGCTTCGCAGCTCCGTCTCAATCTTGTCCTTGTCCAGCAGGA
GGCAGAGGGTCTGCACCTTCTGCAGCCGCTCCTCGGCCAGCTGTCGCTCCTGCCGCTGCT
GCTCTCGGGCTTTGCTACACTCCACCAGCTGTTCCTCCACGACTCGCTTGCTCAGCACCA
GGCTCTCCTTGTCTTTCATACATACCAACTTCTCCTTCGACAACTCTACCTCCAGTGTCT
TGACTTTCTGGTTCAGCATGAGGTTCAAATCATTGCAGCTTTTGTTTGTCTCCTTGAGTT
GCTCTTGGCATTGTTTCTCGCTCAAGATAATCGCAGCCATGTACACCTGGTTGTTCAAGT
GTATCGCCCGGTCGGCCTGACACTGGCGGAAGCTGGAGTTGATTCGGTCCTGTTCTCGGC
GGGCGCTCAGCAGCATCTGCATGATGGCATCTCTGGCGCGGGTGGTGAGGTTGAGCTCCT
TGGACAGGTTGGCCTGGGAGGCTGTGAGCCCCATCACCTGGCCGTAGAGACCGTCAGCCC
GGCGCTCCGTGGCCTGCAGATTGGACTCGGTACTCACGTGCACGTTGCCGTAGACCATGA
AGAGGACGAGGCCCAGGATGATGAGGAATTGGATGAGCGAGAGGAAGAGGAAAAAGTAGC
GCATGTAGTACCAGCAGCCTCTCGGACTGCCCCCGGCCCGTGAATAGGGTCCCCCGTGCT
CCATGGCCAGGCCCATCTTCCTCCCAGGCTCTTCCCGCTGCACCGGCGCTGCTCCGCTGG
TTGGCCTGGGCTGGGTGGTGGCTGCTGCCCCTTCTAGACCTCGCCTCGGCGGGGGGGAGG
GGGGAGTGTTTA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTAGTGTATGTGCGCGGGAGGTCATCTGACTTGGCCCTGGCTGCATCCCGCGACGTGGGC
GTCTCGCTGCACCTTGTCTCCAGACAGGTGAGTCAGGGCCACCCCTCTGTCCTTGGGGCC
TGGAGCCGCCTCAGCCACTGGCTGAGGCTATGGCATTGCTGGCAGGGGGTCGCTGGGACT
CCAGGATCCTCCTCTTGAATTCCTCCAGGGTAGCTGAGTCGATCGGAGGGGGGTTGGGGA
CAGGGCCCACAGGTCTTGGCCCAGGTATCGGCTGAGACTTGGCCTTGATGCAGGTGTCCA
GTGCCGATTTGCTGATGGCCAGCTCCATCTTGAGCTGCTCAATCTCCCGCTTCTTCTCCT
CCAGCTCCTTGGCCAGGTTGTCCTTCTCCTTCCGCAGAGCTGCCTTCTCCTCCAGGGCCA
GCTGCGTCTGCCGGGTACATTCAGCCTGCAGCTTGGCTTCCCGGGCCTGGGCCTCCTTCT
CCACCTTCTCCTTGGCCTCCTGAGTGGCTTGCAGGCCCTGCTGGACCTCCAGCTTCTGGC
GCTGGAGATCCGAATTCTCTCGGGTCACACGCTCGATGCCGGCCCGCAGGCTCCGGGCCA
TCTCCTCCACCTTGGCGCTCATGAGGGTAGGCATGTGGTCACAGGTTCTCCGGATGGAGG
CCAGTTCCGAGCCGAGGGGATGGTACATATTGTAGCCCAGGCTGTCGAGGGATCTCGAGA
TGATGGAGTCCCTCCACAGGCTTCGCAGCTCCGTCTCAATCTTGTCCTTGTCCAGCAGGA
GGCAGAGGGTCTGCACCTTCTGCAGCCGCTCCTCGGCCAGCTGTCGCTCCTGCCGCTGCT
GCTCTCGGGCTTTGCTACACTCCACCAGCTGTTCCTCCACGACTCGCTTGCTCAGCACCA
GGCTCTCCTTGTCTTTCATACATACCAACTTCTCCTTCGACAACTCTACCTCCAGTGTCT
TGACTTTCTGGTTCAGCATGAGGTTCAAATCATTGCAGCTTTTGTTTGTCTCCTTGAGTT
GCTCTTGGCATTGTTTCTCGCTCAAGATAATCGCAGCCATGTACACCTGGTTGTTCAAGT
GTATCGCCCGGTCGGCCTGACACTGGCGGAAGCTGGAGTTGATTCGGTCCTGTTCTCGGC
GGGCGCTCAGCAGCATCTGCATGATGGCATCTCTGGCGCGGGTGGTGAGGTTGAGCTCCT
TGGACAGGTTGGCCTGGGAGGCTGTGAGCCCCATCACCTGGCCGTAGAGACCGTCAGCCC
GGCGCTCCGTGGCCTGCAGATTGGACTCGGTACTCACGTGCACGTTGCCGTAGACCATGA
AGAGGACGAGGCCCAGGATGATGAGGAATTGGATGAGCGAGAGGAAGAGGAAAAAGTAGC
GCATGTAGTACCAGCAGCCTCTCGGACTGCCCCCGGCCCGTGAATAGGGTCCCCCGTGCT
CCATGGCCAGGCCCATCTTCCTCCCAGGCTCTTCCCGCTGCACCGGCGCTGCTCCGCTGG
TTGGCCTGGGCTGGGTGGTGGCTGCTGCCCCTTCTAGACCTCGCCTCGGCGGGGGGGAGG
GGGGAGTGTTTA
|
|
1-141, gnl|bosTau2|chr7 (2753581-2753444) |
|
1-141, gnl|canFam2|chr20 (48420347-48419815) |
|
1-141, gnl|hg17|chr19 (17323547-17324353) |
|
1-141, gnl|Hg17|chr19 (17324020-17324181) |
|
1-141, gnl|panTro1|chr20 (18304449-18305253) |
|
1-141, gnl|rheMac2|chr19 (16911934-16912761) |
| |
|
278-989, gnl|bosTau2|chr7 (2746137-2745426) |
|
278-989, gnl|Hg17|chr19 (17337095-17337806) |
|
278-989, gnl|Mm7|chr8 (69974768-69975473) |
| |
|
1087-1572, gnl|bosTau2|chr7 (2736314-2735830) |
|
1087-1572, gnl|Hg17|chr19 (17348728-17349180) |
|
1087-1572, gnl|Mm7|chr8 (69978517-69978965) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-141, gnl|bosTau2|chr7 (2753581-2753444) |
|
1-141, gnl|canFam2|chr20 (48420347-48419815) |
|
1-141, gnl|hg17|chr19 (17323547-17324353) |
|
1-141, gnl|Hg17|chr19 (17324020-17324181) |
|
1-141, gnl|panTro1|chr20 (18304449-18305253) |
|
1-141, gnl|rheMac2|chr19 (16911934-16912761) |
| |
|
278-989, gnl|bosTau2|chr7 (2746137-2745426) |
|
278-989, gnl|Hg17|chr19 (17337095-17337806) |
|
278-989, gnl|Mm7|chr8 (69974768-69975473) |
| |
|
1087-1572, gnl|bosTau2|chr7 (2736314-2735830) |
|
1087-1572, gnl|Hg17|chr19 (17348728-17349180) |
|
1087-1572, gnl|Mm7|chr8 (69978517-69978965) |
|
elu (0.770713) |
|
nlu (0.383362) |
|
eep (0.367692) |
|
nje (0.33184) |
|
nco (0.323468) |
|
csp (0.322373) |
|
cli (0.305623) |
|
cga (0.279096) |
|
mas (0.210305) |
|
nep (0.183925) |
|
fty (0.17584) |
|
eli (0.151814) |
|
nca (0.136874) |
|
cly (0.120642) |
|
clu (0.119646) |
|
med (0.116252) |
|
jca (0.11396) |
|
cty (0.10408) |
|
eje (0.0988338) |
|
elu (0.770713) |
|
nlu (0.383362) |
|
eep (0.367692) |
|
nje (0.33184) |
|
nco (0.323468) |
|
csp (0.322373) |
|
cli (0.305623) |
|
cga (0.279096) |
|
mas (0.210305) |
|
nep (0.183925) |
|
fty (0.17584) |
|
eli (0.151814) |
|
nca (0.136874) |
|
cly (0.120642) |
|
clu (0.119646) |
|
med (0.116252) |
|
jca (0.11396) |
|
cty (0.10408) |
|
eje (0.0988338) |
