Ss1.1-Utr1-UTR010080G02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAATCCATTCTTCCAGCACACAGCTGTCTTCCGGGCACACAGTGGCTGTAATGGGCATTG ACTTCACACTTAGATACTTCTACAAAGTTCTGATGGACTTACTCCCAGTGTGTAACCAGG ACGGTGGCAACAAAATAAGGTGCTTCATAATGGAGGACAGGGGTTATCTGGTGGCGCATC CAACCCTCATTGACCCCAAAGGACACGCGCCCGTGGAACAGCAGCACATCACCCACAAGG AGCCCCTGGTAGCAAATGACATCCTGAACCCCCCCAACTTTGTAAAGAAAAACCTGTGCA ACAGCTTCAGCGACAGAACGGTCCAGAGGTTTTATAAATTCAACACGAGCCTGGTGGGGG ATTTGACAAACCTTGTGCATGGCAGTCACTGTTCTAAATACAGACTGGCAAGGATCCCAG GAACCAATGCGTTTGTCGGCATTGTCAACGAAACATGTGACTCTCTTGCCTTCTGTGCCT GTAGCATGGTGGACCGGCTGTGTCTTAACTGCCACCGAATGGAACAAAATGAATGTGAAT GTCCTTGTGAGTGCCCTCTAGAGGTCAATGAGTGCACTGGCAACCTCACCAATGCAGAGA ATAGAAACCCAAGTTGTGAGGTGCACCAGGAGCCAGTGACGTACACAGCCATCGACCCCG GCCTGCAGGATGTGGCATATGGAGGTTCCCAGGCTAGGGGTCGAACCAGGATGGAAAGTG GGGACTGCTTTGGCGTGCTGGATTGTGAATGGTGCATGGTGGACAGCGATGGCAAGACCC ACCTGGACAAATCCTACTGTGCGCCCCAGAAAGAATGAGGCCAGGGATCGAACCTGAAAC CTCATGGTTACTAGTCAGATTGGTTTCCACTGTGCCACGACAGGAAGTCCTGTTTGGTGT CTGTCTTGTTGGTGCATGTTGGAGAGACATAATTGGGGATCTCTTGCTGCCCCAGTCCCA TCCTCGCCGTGTACGCCTACCGCCATCAGATCCATCGGCGCAGCCACCAGCACATGTCTC CTCTCGCTGCCCAAGAAATGTCAGTGCGTATGTCCAACCTGGAGAACGACAGAGACGAAA GAGATGACGACAGCCACGAGGACAGAGGCATCATCAGCAATACTCGGTTTATAGCCGCGG TCATCGAACGGCACGCACACAGCCCAGAAAGGAGGCGCCGCTACTGGGGCCGCTCAGGAA CAGAAAGTGATCACGGTTACAGCACCATGAGCCCCCAGGAAGACAGTGAAAACCCCCCGT GCACCAACGACCCTTTGTCGGCCGGGGTGGACGTGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAATCCATTCTTCCAGCACACAGCTGTCTTCCGGGCACACAGTGGCTGTAATGGGCATTG ACTTCACACTTAGATACTTCTACAAAGTTCTGATGGACTTACTCCCAGTGTGTAACCAGG ACGGTGGCAACAAAATAAGGTGCTTCATAATGGAGGACAGGGGTTATCTGGTGGCGCATC CAACCCTCATTGACCCCAAAGGACACGCGCCCGTGGAACAGCAGCACATCACCCACAAGG AGCCCCTGGTAGCAAATGACATCCTGAACCCCCCCAACTTTGTAAAGAAAAACCTGTGCA ACAGCTTCAGCGACAGAACGGTCCAGAGGTTTTATAAATTCAACACGAGCCTGGTGGGGG ATTTGACAAACCTTGTGCATGGCAGTCACTGTTCTAAATACAGACTGGCAAGGATCCCAG GAACCAATGCGTTTGTCGGCATTGTCAACGAAACATGTGACTCTCTTGCCTTCTGTGCCT GTAGCATGGTGGACCGGCTGTGTCTTAACTGCCACCGAATGGAACAAAATGAATGTGAAT GTCCTTGTGAGTGCCCTCTAGAGGTCAATGAGTGCACTGGCAACCTCACCAATGCAGAGA ATAGAAACCCAAGTTGTGAGGTGCACCAGGAGCCAGTGACGTACACAGCCATCGACCCCG GCCTGCAGGATGTGGCATATGGAGGTTCCCAGGCTAGGGGTCGAACCAGGATGGAAAGTG GGGACTGCTTTGGCGTGCTGGATTGTGAATGGTGCATGGTGGACAGCGATGGCAAGACCC ACCTGGACAAATCCTACTGTGCGCCCCAGAAAGAATGAGGCCAGGGATCGAACCTGAAAC CTCATGGTTACTAGTCAGATTGGTTTCCACTGTGCCACGACAGGAAGTCCTGTTTGGTGT CTGTCTTGTTGGTGCATGTTGGAGAGACATAATTGGGGATCTCTTGCTGCCCCAGTCCCA TCCTCGCCGTGTACGCCTACCGCCATCAGATCCATCGGCGCAGCCACCAGCACATGTCTC CTCTCGCTGCCCAAGAAATGTCAGTGCGTATGTCCAACCTGGAGAACGACAGAGACGAAA GAGATGACGACAGCCACGAGGACAGAGGCATCATCAGCAATACTCGGTTTATAGCCGCGG TCATCGAACGGCACGCACACAGCCCAGAAAGGAGGCGCCGCTACTGGGGCCGCTCAGGAA CAGAAAGTGATCACGGTTACAGCACCATGAGCCCCCAGGAAGACAGTGAAAACCCCCCGT GCACCAACGACCCTTTGTCGGCCGGGGTGGACGTGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 56 entry(ies) | More info |
| Aligned organism(s): 56 entry(ies) | Help | Less info |
| 15-141, gnl|bosTau2|chr3 (54980990-54980864) | |
| 15-141, gnl|canFam2|chr5 (48577677-48577510) | |
| 15-141, gnl|danRer3|chr6 (15978044-15977887) | |
| 15-141, gnl|dasNov1|scaffold_1270 (40054-39887) | |
| 15-141, gnl|echTel1|scaffold_319414 (94125-93958) | |
| 15-141, gnl|fr1|chrUn (67308298-67308148) | |
| 15-141, gnl|galGal2|chr8 (28371341-28371508) | |
| 15-141, gnl|hg17|chr1 (64849241-64849408) | |
| 15-141, gnl|Hg17|chr1 (64849266-64849392) | |
| 15-141, gnl|loxAfr1|scaffold_7399 (67757-67593) | |
| 15-141, gnl|mm7|chr4 (100357383-100357550) | |
| 15-141, gnl|Mm7|chr4 (100357408-100357534) | |
| 15-141, gnl|monDom2|scaffold_40 (10151107-10150947) | |
| 15-141, gnl|oryCun1|scaffold_212989 (150550-150718) | |
| 15-141, gnl|panTro1|chr1 (63190996-63191163) | |
| 15-141, gnl|rheMac2|chr1 (67440702-67440869) | |
| 15-141, gnl|rn3|chr5 (121641743-121641910) | |
| 15-141, gnl|tetNig1|chrUn_random (129261768-129261634) | |
| 15-141, gnl|xenTro1|scaffold_1 (1777568-1777413) | |
| 351-517, gnl|bosTau2|chr3 (54977198-54977032) | |
| 351-517, gnl|canFam2|chr5 (48573806-48573594) | |
| 351-517, gnl|danRer3|chr6 (15972678-15972500) | |
| 351-517, gnl|echTel1|scaffold_319414 (90392-90217) | |
| 351-517, gnl|fr1|chrUn (67306884-67306702) | |
| 351-517, gnl|galGal2|chr8 (28374499-28374723) | |
| 351-517, gnl|hg17|chr1 (64853075-64853288) | |
| 351-517, gnl|Hg17|chr1 (64853099-64853265) | |
| 351-517, gnl|loxAfr1|scaffold_7399 (64136-63921) | |
| 351-517, gnl|mm7|chr4 (100364505-100364693) | |
| 351-517, gnl|Mm7|chr4 (100364515-100364681) | |
| 351-517, gnl|monDom2|scaffold_40 (10145220-10144998) | |
| 351-517, gnl|oryCun1|scaffold_212989 (154763-154975) | |
| 351-517, gnl|panTro1|chr1 (63194826-63195039) | |
| 351-517, gnl|rheMac2|chr1 (67444491-67444704) | |
| 351-517, gnl|rn3|chr5 (121648297-121648485) | |
| 351-517, gnl|tetNig1|chrUn_random (129260589-129260412) | |
| 351-517, gnl|xenTro1|scaffold_1 (1775918-1775666) | |
| 1114-1217, gnl|bosTau2|chr3 (54970587-54970484) | |
| 1114-1217, gnl|canFam2|chr5 (48567372-48567231) | |
| 1114-1217, gnl|danRer3|chr6 (15954295-15954171) | |
| 1114-1217, gnl|dasNov1|scaffold_16558 (46363-46209) | |
| 1114-1217, gnl|echTel1|scaffold_319414 (83635-83502) | |
| 1114-1217, gnl|fr1|chrUn (67304595-67304446) | |
| 1114-1217, gnl|galGal2|chr8 (28379534-28379658) | |
| 1114-1217, gnl|hg17|chr1 (64859690-64859844) | |
| 1114-1217, gnl|Hg17|chr1 (64859709-64859812) | |
| 1114-1217, gnl|loxAfr1|scaffold_7399 (57415-57260) | |
| 1114-1217, gnl|mm7|chr4 (100371155-100371308) | |
| 1114-1217, gnl|Mm7|chr4 (100371174-100371277) | |
| 1114-1217, gnl|monDom2|scaffold_40 (10135696-10135541) | |
| 1114-1217, gnl|oryCun1|scaffold_121476 (2942-3096) | |
| 1114-1217, gnl|panTro1|chr1 (63201399-63201553) | |
| 1114-1217, gnl|rheMac2|chr1 (67451393-67451547) | |
| 1114-1217, gnl|rn3|chr5 (121655436-121655591) | |
| 1114-1217, gnl|tetNig1|chrUn_random (129569982-129569862) | |
| 1114-1217, gnl|xenTro1|scaffold_1 (1771281-1771154) |
| Aligned organism(s): 56 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 15-141, gnl|bosTau2|chr3 (54980990-54980864) | |
| 15-141, gnl|canFam2|chr5 (48577677-48577510) | |
| 15-141, gnl|danRer3|chr6 (15978044-15977887) | |
| 15-141, gnl|dasNov1|scaffold_1270 (40054-39887) | |
| 15-141, gnl|echTel1|scaffold_319414 (94125-93958) | |
| 15-141, gnl|fr1|chrUn (67308298-67308148) | |
| 15-141, gnl|galGal2|chr8 (28371341-28371508) | |
| 15-141, gnl|hg17|chr1 (64849241-64849408) | |
| 15-141, gnl|Hg17|chr1 (64849266-64849392) | |
| 15-141, gnl|loxAfr1|scaffold_7399 (67757-67593) | |
| 15-141, gnl|mm7|chr4 (100357383-100357550) | |
| 15-141, gnl|Mm7|chr4 (100357408-100357534) | |
| 15-141, gnl|monDom2|scaffold_40 (10151107-10150947) | |
| 15-141, gnl|oryCun1|scaffold_212989 (150550-150718) | |
| 15-141, gnl|panTro1|chr1 (63190996-63191163) | |
| 15-141, gnl|rheMac2|chr1 (67440702-67440869) | |
| 15-141, gnl|rn3|chr5 (121641743-121641910) | |
| 15-141, gnl|tetNig1|chrUn_random (129261768-129261634) | |
| 15-141, gnl|xenTro1|scaffold_1 (1777568-1777413) | |
| 351-517, gnl|bosTau2|chr3 (54977198-54977032) | |
| 351-517, gnl|canFam2|chr5 (48573806-48573594) | |
| 351-517, gnl|danRer3|chr6 (15972678-15972500) | |
| 351-517, gnl|echTel1|scaffold_319414 (90392-90217) | |
| 351-517, gnl|fr1|chrUn (67306884-67306702) | |
| 351-517, gnl|galGal2|chr8 (28374499-28374723) | |
| 351-517, gnl|hg17|chr1 (64853075-64853288) | |
| 351-517, gnl|Hg17|chr1 (64853099-64853265) | |
| 351-517, gnl|loxAfr1|scaffold_7399 (64136-63921) | |
| 351-517, gnl|mm7|chr4 (100364505-100364693) | |
| 351-517, gnl|Mm7|chr4 (100364515-100364681) | |
| 351-517, gnl|monDom2|scaffold_40 (10145220-10144998) | |
| 351-517, gnl|oryCun1|scaffold_212989 (154763-154975) | |
| 351-517, gnl|panTro1|chr1 (63194826-63195039) | |
| 351-517, gnl|rheMac2|chr1 (67444491-67444704) | |
| 351-517, gnl|rn3|chr5 (121648297-121648485) | |
| 351-517, gnl|tetNig1|chrUn_random (129260589-129260412) | |
| 351-517, gnl|xenTro1|scaffold_1 (1775918-1775666) | |
| 1114-1217, gnl|bosTau2|chr3 (54970587-54970484) | |
| 1114-1217, gnl|canFam2|chr5 (48567372-48567231) | |
| 1114-1217, gnl|danRer3|chr6 (15954295-15954171) | |
| 1114-1217, gnl|dasNov1|scaffold_16558 (46363-46209) | |
| 1114-1217, gnl|echTel1|scaffold_319414 (83635-83502) | |
| 1114-1217, gnl|fr1|chrUn (67304595-67304446) | |
| 1114-1217, gnl|galGal2|chr8 (28379534-28379658) | |
| 1114-1217, gnl|hg17|chr1 (64859690-64859844) | |
| 1114-1217, gnl|Hg17|chr1 (64859709-64859812) | |
| 1114-1217, gnl|loxAfr1|scaffold_7399 (57415-57260) | |
| 1114-1217, gnl|mm7|chr4 (100371155-100371308) | |
| 1114-1217, gnl|Mm7|chr4 (100371174-100371277) | |
| 1114-1217, gnl|monDom2|scaffold_40 (10135696-10135541) | |
| 1114-1217, gnl|oryCun1|scaffold_121476 (2942-3096) | |
| 1114-1217, gnl|panTro1|chr1 (63201399-63201553) | |
| 1114-1217, gnl|rheMac2|chr1 (67451393-67451547) | |
| 1114-1217, gnl|rn3|chr5 (121655436-121655591) | |
| 1114-1217, gnl|tetNig1|chrUn_random (129569982-129569862) | |
| 1114-1217, gnl|xenTro1|scaffold_1 (1771281-1771154) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eru (0.120048) | |
| cty (0.10408) |