Non-Coding RNA Search

Ss1.1-Utr1-UTR01A020092.5

Sequence:


               
               GAAGAGAGTCTCGTCTCAGAGAACTCTGGGACAATGTTAAAACACACCAACACCCATATT
ATAAGGGTGCCAGAAGAGAGAGAGAAGGGGACAGAAAAAATATTCCAAGAGATAATAGCC
AAAAACTTCCCTAACATGGGAAAGGAACCACTCACTCAAATCCAGGAAGCACAACGAGTA
CCATATAAAATAAACCCAAGGAGGAACACCCCAAGACACATATTAATCAAACTGACCAAA
ATTAAAGACAAAGAGAAAATACTGAGCGGCTAGGGAAAAGAAAGAACATGCGAGGGAACC
TCAATAAGGTTATCAGCTGATTTTTCAGCAGAAACTCTGCAGGCCAGGAGTGAGTGGCAC
AATGTACTTAAAGTCATGAAAGAAAAAACCTCCAACCAGGATTACTTTACCCAGCGAGGC
TCTCATTCAGATTTGAAGAAGAAATAAAAAGCTTTACAGATAAGCAAAAGCTAAGAGAAT
TCAGCAACCCTAAACCAGCTTTACAACAGATACTAAGGGAACTTCTCTAAGCAGAAAAGC
CACAACTAGAAACAAAAATGCCACAAATGACATGACTCACCAATAAAGGCATATATACTG
TAAATGCAGTCACCTCTGAATGCGAGAGCCCTTGAGTTCTGTAGGCTATGAAAATTCAGA
ACACTGGCCCCATTGTTGATGTGTATATCAAAGGAATGATTTCGCTGAGCCCATGCCTCT
TGTTCCTGCTCCCTGCCCTTTGTTGCAAAAACTCCTATATATCCTAGCTCCTCCCTCACC
CCCCTTGGAGCAGTTTCTCAGGGCTACCTGAGATTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGAGAGTCTCGTCTCAGAGAACTCTGGGACAATGTTAAAACACACCAACACCCATATT
ATAAGGGTGCCAGAAGAGAGAGAGAAGGGGACAGAAAAAATATTCCAAGAGATAATAGCC
AAAAACTTCCCTAACATGGGAAAGGAACCACTCACTCAAATCCAGGAAGCACAACGAGTA
CCATATAAAATAAACCCAAGGAGGAACACCCCAAGACACATATTAATCAAACTGACCAAA
ATTAAAGACAAAGAGAAAATACTGAGCGGCTAGGGAAAAGAAAGAACATGCGAGGGAACC
TCAATAAGGTTATCAGCTGATTTTTCAGCAGAAACTCTGCAGGCCAGGAGTGAGTGGCAC
AATGTACTTAAAGTCATGAAAGAAAAAACCTCCAACCAGGATTACTTTACCCAGCGAGGC
TCTCATTCAGATTTGAAGAAGAAATAAAAAGCTTTACAGATAAGCAAAAGCTAAGAGAAT
TCAGCAACCCTAAACCAGCTTTACAACAGATACTAAGGGAACTTCTCTAAGCAGAAAAGC
CACAACTAGAAACAAAAATGCCACAAATGACATGACTCACCAATAAAGGCATATATACTG
TAAATGCAGTCACCTCTGAATGCGAGAGCCCTTGAGTTCTGTAGGCTATGAAAATTCAGA
ACACTGGCCCCATTGTTGATGTGTATATCAAAGGAATGATTTCGCTGAGCCCATGCCTCT
TGTTCCTGCTCCCTGCCCTTTGTTGCAAAAACTCCTATATATCCTAGCTCCTCCCTCACC
CCCCTTGGAGCAGTTTCTCAGGGCTACCTGAGATTC

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               1-329, gnl|bosTau2|chr1 (62806046-62805707)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-329, gnl|bosTau2|chr1 (62806046-62805707)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               med (0.232504)
               

               
               hea (0.204499)
               

               
               thg (0.126791)
               

               
               ese (0.126502)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.232504)
               

               
               hea (0.204499)
               

               
               thg (0.126791)
               

               
               ese (0.126502)