Non-Coding RNA Search

Ss1.1-Utr1-UTR01A080083.5

Sequence:


               
               CTCTAGGGTTTCCTTACTTGAGTCTCACAAAGACATATAGATTATTTTTATACTACCCAT
GGGGAGATTAGAGCTGAGTAGGGTTAAGATTTGCCTAAACTCACATAACCAAGAAGTGGT
TAAGCCAGGATTTGAACCTAGATTTGACTCTCAGAGCCTATGCCCTAACCCACTACCCCA
CCCTGGCTCACAGACCTGGCTTTGGGTGTTGGCTCATTCGCCTCCTAGGTGTGAATCCTT
GGGTAGGTTAGTTATAGTCGCTGAGCTTCAGCCTCTGCATCTGTAAGAATGCAGATGCAT
AATGAGTACTCCTAGCATTTTAGCTGGACCTGGTTTCATGAGCTCGTACGGGTCCCTTTT
TGGGAACTACGGTGCCCCTGCTGCATCGCATCATTGTGCTTTCCTTCGGTCCCCCTGCTA
GATCTGGCACCACTCTTTCTACAATGAGCTTCGTGTTGCCCCAGAAGAGCATCCGACCCT
GCTCACCGAGGCACCCCTGAACCCCAAGGCCAACCGGGAGAAGATGACCCAGGTAAATAT
CCACTCCAGGACCCAGTACATTAGGTTTGGGGAAAGTCCTGTGTGAAAGAGGCCGTGCAG
GACAGCAGAGAGCCGCCCACCCGACAGTCCTCTCGTGGGCTGACAACTTTCCAGGATTCT
CAAGGATAGGATCGTCTTGACAGTATGACATCATTACTGTAGGACTAGCCCCTTGGCTCC
AAGAACAATAGGGATTTCCAAGACTTAATTGAAAAGGGGACATGTTGAGGTTAAACACTT
CTGAGGAGAAGTCATTTCAAAATGCAGGCTAACATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTAGGGTTTCCTTACTTGAGTCTCACAAAGACATATAGATTATTTTTATACTACCCAT
GGGGAGATTAGAGCTGAGTAGGGTTAAGATTTGCCTAAACTCACATAACCAAGAAGTGGT
TAAGCCAGGATTTGAACCTAGATTTGACTCTCAGAGCCTATGCCCTAACCCACTACCCCA
CCCTGGCTCACAGACCTGGCTTTGGGTGTTGGCTCATTCGCCTCCTAGGTGTGAATCCTT
GGGTAGGTTAGTTATAGTCGCTGAGCTTCAGCCTCTGCATCTGTAAGAATGCAGATGCAT
AATGAGTACTCCTAGCATTTTAGCTGGACCTGGTTTCATGAGCTCGTACGGGTCCCTTTT
TGGGAACTACGGTGCCCCTGCTGCATCGCATCATTGTGCTTTCCTTCGGTCCCCCTGCTA
GATCTGGCACCACTCTTTCTACAATGAGCTTCGTGTTGCCCCAGAAGAGCATCCGACCCT
GCTCACCGAGGCACCCCTGAACCCCAAGGCCAACCGGGAGAAGATGACCCAGGTAAATAT
CCACTCCAGGACCCAGTACATTAGGTTTGGGGAAAGTCCTGTGTGAAAGAGGCCGTGCAG
GACAGCAGAGAGCCGCCCACCCGACAGTCCTCTCGTGGGCTGACAACTTTCCAGGATTCT
CAAGGATAGGATCGTCTTGACAGTATGACATCATTACTGTAGGACTAGCCCCTTGGCTCC
AAGAACAATAGGGATTTCCAAGACTTAATTGAAAAGGGGACATGTTGAGGTTAAACACTT
CTGAGGAGAAGTCATTTCAAAATGCAGGCTAACATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-816, gnl|bosTau2|chr26 (5417666-5416880)
               

               
               2-816, gnl|Hg17|chr10 (90694082-90693235)
               

               
               2-816, gnl|Mm7|chr19 (33950196-33949390)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-816, gnl|bosTau2|chr26 (5417666-5416880)
               

               
               2-816, gnl|Hg17|chr10 (90694082-90693235)
               

               
               2-816, gnl|Mm7|chr19 (33950196-33949390)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               gul (0.177588)
               

               
               cut (0.169924)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               cut (0.169924)

	2-816, gnl\|bosTau2\|chr26 (5417666-5416880)
	2-816, gnl\|Hg17\|chr10 (90694082-90693235)
	2-816, gnl\|Mm7\|chr19 (33950196-33949390)