Ss1.1-Utr1-UTR01B070099.5.5
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CCATCTTGGAAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTCGGGTGGGCCC
AGTCCCGGCGCGGTGCGGCTCTGCGGCACGGGCCCCGCTCTCCCGCTCCCTGCTCCGGCC
TCGACCACGGCGAGCCTGAGCGCGGCGGCGGCCCACGCGCGGCGACGGGGAGAGATGAGC
AGCAGCAGTGGTAAGAGAGCGCCGACAACCGCCACCCAGCGACTGAAGCAAGACTATCTC
CGAATTAAGAAAGACCCCGTGCCTTACATCTGTGCTGAGCCCCTACCCTCCAACATTCTG
GAGTGGCACTATGTGGTCCGAGGCCCTGAGATGACTCCCTATGAAGGTGGCTATTATCAT
GGAAAACTAATTTTTCCCAGAGAATTTCCTTTTAAACCTCCTAGTATTTATATGATAACT
CCCAATGGAAGGTTCAAGTGCAACACTAGGCTGTGTCTTTCCATCACGGATTTCCACCCG
GACACGTGGAACCCGGCCTGGTCTGTCTCCACCATCCTGACAGGGCTCCTCAGCTTCATG
GTGGAGAAGGGCCCCACCCTGGGCAGCATCGAGACATCGGACTTCACGAAAAGACAACTG
GCTGCACAGAGTTTAGTGTTTAATTTAAAAGACAAAGTCTTTTGTGAATTATTTCCCGAG
GTCGTGGAGGAAATTAAGCAGAAGCAGAAAGCACAGGACGAACTCAGTAGCAGACCCCAG
GCTCTCCCGTTGCCAGACGTGGTTCCAGACGGGGAGACGCACCACGGCCAGAACGGGCTC
CCGATCCTCAACGGCCACGCACCGGGGGCCGGGCCGCACCTCGCGGGGCTCCAGCAGGCC
AACCGGCACCACGGACTCCTGGGCGGTGCCCTGGCGAACTTGTTTGTCATAGTTGGCTTT
GCGGCCTTCGCCTACACGGTCAAGTACGTGCTGAGGAGCATAGCCCAGGAGTGAGCCGCC
GCCACGACCCGCAGCGGTGGTCGGAAACGAGGGACGCTGGGCCCACACTTGACGCGGGCT
GGCTGGACGTGCTGCCGAGCACAGGGCTGGCCCGCCTGACTCCTGGGGTTAGCTTTTTTA
AACCCTTGAAAAGGAAAACAAAACCCAAAGCGTGTAGTTTGGATTCGGAGCAGACTGAGA
TCCCAGCCCCCCGTTCTCCGGGGGCTGTCGGGGGCCGTGGGCTGTGTCCACAAGGAAGCC
CCGTGCTTTGGTTTTGTAGCTTATCTCCTGTGTTGTCTCTTGGACCTGTTTTAGTAACTT
GTTTTTCATTTTATTAGACTTGGTCTCTTACAAACATAAAACTCAATG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CCATCTTGGAAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTCGGGTGGGCCC
AGTCCCGGCGCGGTGCGGCTCTGCGGCACGGGCCCCGCTCTCCCGCTCCCTGCTCCGGCC
TCGACCACGGCGAGCCTGAGCGCGGCGGCGGCCCACGCGCGGCGACGGGGAGAGATGAGC
AGCAGCAGTGGTAAGAGAGCGCCGACAACCGCCACCCAGCGACTGAAGCAAGACTATCTC
CGAATTAAGAAAGACCCCGTGCCTTACATCTGTGCTGAGCCCCTACCCTCCAACATTCTG
GAGTGGCACTATGTGGTCCGAGGCCCTGAGATGACTCCCTATGAAGGTGGCTATTATCAT
GGAAAACTAATTTTTCCCAGAGAATTTCCTTTTAAACCTCCTAGTATTTATATGATAACT
CCCAATGGAAGGTTCAAGTGCAACACTAGGCTGTGTCTTTCCATCACGGATTTCCACCCG
GACACGTGGAACCCGGCCTGGTCTGTCTCCACCATCCTGACAGGGCTCCTCAGCTTCATG
GTGGAGAAGGGCCCCACCCTGGGCAGCATCGAGACATCGGACTTCACGAAAAGACAACTG
GCTGCACAGAGTTTAGTGTTTAATTTAAAAGACAAAGTCTTTTGTGAATTATTTCCCGAG
GTCGTGGAGGAAATTAAGCAGAAGCAGAAAGCACAGGACGAACTCAGTAGCAGACCCCAG
GCTCTCCCGTTGCCAGACGTGGTTCCAGACGGGGAGACGCACCACGGCCAGAACGGGCTC
CCGATCCTCAACGGCCACGCACCGGGGGCCGGGCCGCACCTCGCGGGGCTCCAGCAGGCC
AACCGGCACCACGGACTCCTGGGCGGTGCCCTGGCGAACTTGTTTGTCATAGTTGGCTTT
GCGGCCTTCGCCTACACGGTCAAGTACGTGCTGAGGAGCATAGCCCAGGAGTGAGCCGCC
GCCACGACCCGCAGCGGTGGTCGGAAACGAGGGACGCTGGGCCCACACTTGACGCGGGCT
GGCTGGACGTGCTGCCGAGCACAGGGCTGGCCCGCCTGACTCCTGGGGTTAGCTTTTTTA
AACCCTTGAAAAGGAAAACAAAACCCAAAGCGTGTAGTTTGGATTCGGAGCAGACTGAGA
TCCCAGCCCCCCGTTCTCCGGGGGCTGTCGGGGGCCGTGGGCTGTGTCCACAAGGAAGCC
CCGTGCTTTGGTTTTGTAGCTTATCTCCTGTGTTGTCTCTTGGACCTGTTTTAGTAACTT
GTTTTTCATTTTATTAGACTTGGTCTCTTACAAACATAAAACTCAATG
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gi|56206319|emb|CAI23258.1| |
Protein identifier
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gi|56206319|emb|CAI23258.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
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10-179, gnl|bosTau2|chr16 (37956119-37956287) |
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10-179, gnl|Hg17|chr1 (1249116-1248964) |
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10-179, gnl|Mm7|chr4 (154933407-154933560) |
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448-588, gnl|bosTau2|chr16 (37966203-37966343) |
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448-588, gnl|canFam2|chr5 (59444602-59444747) |
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448-588, gnl|danRer3|chr23 (50764820-50764970) |
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448-588, gnl|echTel1|scaffold_240175 (3247-3102) |
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448-588, gnl|fr1|chrUn (50389127-50389277) |
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448-588, gnl|galGal2|chr21 (2366504-2366357) |
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448-588, gnl|hg17|chr1 (1232286-1232436) |
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448-588, gnl|Hg17|chr1 (1232435-1232295) |
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448-588, gnl|loxAfr1|scaffold_38925 (811-957) |
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448-588, gnl|mm7|chr4 (154945116-154944963) |
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448-588, gnl|Mm7|chr4 (154944962-154945102) |
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448-588, gnl|monDom2|scaffold_219 (693360-693509) |
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448-588, gnl|oryCun1|scaffold_137295 (310-462) |
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448-588, gnl|panTro1|chr1 (1118214-1118364) |
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448-588, gnl|rn3|chr5 (172804997-172804844) |
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448-588, gnl|tetNig1|chrUn_random (82831189-82831335) |
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448-588, gnl|xenTro1|scaffold_414 (750402-750252) |
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668-1308, gnl|bosTau2|chr16 (37967312-37967956) |
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668-1308, gnl|Hg17|chr1 (1230792-1230170) |
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668-1308, gnl|Mm7|chr4 (154946621-154947247) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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10-179, gnl|bosTau2|chr16 (37956119-37956287) |
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10-179, gnl|Hg17|chr1 (1249116-1248964) |
|
10-179, gnl|Mm7|chr4 (154933407-154933560) |
| |
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448-588, gnl|bosTau2|chr16 (37966203-37966343) |
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448-588, gnl|canFam2|chr5 (59444602-59444747) |
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448-588, gnl|danRer3|chr23 (50764820-50764970) |
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448-588, gnl|echTel1|scaffold_240175 (3247-3102) |
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448-588, gnl|fr1|chrUn (50389127-50389277) |
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448-588, gnl|galGal2|chr21 (2366504-2366357) |
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448-588, gnl|hg17|chr1 (1232286-1232436) |
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448-588, gnl|Hg17|chr1 (1232435-1232295) |
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448-588, gnl|loxAfr1|scaffold_38925 (811-957) |
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448-588, gnl|mm7|chr4 (154945116-154944963) |
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448-588, gnl|Mm7|chr4 (154944962-154945102) |
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448-588, gnl|monDom2|scaffold_219 (693360-693509) |
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448-588, gnl|oryCun1|scaffold_137295 (310-462) |
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448-588, gnl|panTro1|chr1 (1118214-1118364) |
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448-588, gnl|rn3|chr5 (172804997-172804844) |
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448-588, gnl|tetNig1|chrUn_random (82831189-82831335) |
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448-588, gnl|xenTro1|scaffold_414 (750402-750252) |
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668-1308, gnl|bosTau2|chr16 (37967312-37967956) |
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668-1308, gnl|Hg17|chr1 (1230792-1230170) |
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668-1308, gnl|Mm7|chr4 (154946621-154947247) |
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nep (0.183925) |
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cst (0.140036) |
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pla (0.133672) |
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cly (0.120642) |
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ebs (0.118301) |
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jca (0.11396) |
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jej (0.0989218) |
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nep (0.183925) |
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cst (0.140036) |
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pla (0.133672) |
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cly (0.120642) |
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ebs (0.118301) |
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jca (0.11396) |
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jej (0.0989218) |
