Non-Coding RNA Search

Ss1.1-Utr1-UTR01C100098.5

Sequence:


               
               CGTTAAGTGGGTTTCTCGAGACGGAGCTCACGCTCAGAGCTTGGATGGCTCGGTTACTCG
CTCTGTCCCACAGCAACCTTCTCCCTGTCATTTGAGCCGTCTGGTCTGTGTGTCCACCCG
TGTTCTATCTGGTTATCAGCCACTGATCACTTCTGTCGCCCACCTGGGTCAGCTATGTCA
CCCACCCAGCCAGCCAACCCCGGTTGGAAAATACCTGCTTGATGGGGGGGGGTCCAGGAT
CGGGGGGGCAGGGTGTTGGCCTAAGGACCTCAGCGGCCCGGGGTTAGCCCCCCAGGACTC
AGCTTCGCCGGCTTTGGGAGAGGAACTCATTCGCTTGACTACATTTCGGGGTCCCTGGGG
TGACCCAGACTTTGGTGCGCTTGTAGTTTTGAGTGGGAAGCGTCCCCAAAGCTGGCCTGG
CAAAGCCCCTGTCCACGGCCTCTACCGTGAGCTCAGGGAGACCTCAGAACACTGCAGGGC
CCTTGCGTCGAGGCAGGAGCTCCTGCGCCCCATGTCAGGCTCCAGCCTCTGCGGCGGCCG
CTCAGGTCCTGATGGACCAGCTCAGCGGCCTGGCCCCCAGCACGCCCGGGTCATCGTGAA
CGGGGTCACGGTTCAGGGAGGCACAGTGGGGGGCCGATGTTACGCCCACTCCTTGCAGGC
CCACCTTCGATCGCGGGCCAGTCTGGGGCTGCGGGGGGCAACGTGTGCTCCTTCTCTGTG
TGCAGCTTCAAAACACATTTTGAGCTACTGCTTTCTTATTGACTTCTTTCTAGTTTTCTG
AACAAATTAGTCTGTAATTTTTTATTTTTTTCTATTTATGGCTGACCCTTGTGGATTTAC
GAGGCCGTGCGAGAGGAATTATGTATCTTACACACACACGTTTGGCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGTTAAGTGGGTTTCTCGAGACGGAGCTCACGCTCAGAGCTTGGATGGCTCGGTTACTCG
CTCTGTCCCACAGCAACCTTCTCCCTGTCATTTGAGCCGTCTGGTCTGTGTGTCCACCCG
TGTTCTATCTGGTTATCAGCCACTGATCACTTCTGTCGCCCACCTGGGTCAGCTATGTCA
CCCACCCAGCCAGCCAACCCCGGTTGGAAAATACCTGCTTGATGGGGGGGGGTCCAGGAT
CGGGGGGGCAGGGTGTTGGCCTAAGGACCTCAGCGGCCCGGGGTTAGCCCCCCAGGACTC
AGCTTCGCCGGCTTTGGGAGAGGAACTCATTCGCTTGACTACATTTCGGGGTCCCTGGGG
TGACCCAGACTTTGGTGCGCTTGTAGTTTTGAGTGGGAAGCGTCCCCAAAGCTGGCCTGG
CAAAGCCCCTGTCCACGGCCTCTACCGTGAGCTCAGGGAGACCTCAGAACACTGCAGGGC
CCTTGCGTCGAGGCAGGAGCTCCTGCGCCCCATGTCAGGCTCCAGCCTCTGCGGCGGCCG
CTCAGGTCCTGATGGACCAGCTCAGCGGCCTGGCCCCCAGCACGCCCGGGTCATCGTGAA
CGGGGTCACGGTTCAGGGAGGCACAGTGGGGGGCCGATGTTACGCCCACTCCTTGCAGGC
CCACCTTCGATCGCGGGCCAGTCTGGGGCTGCGGGGGGCAACGTGTGCTCCTTCTCTGTG
TGCAGCTTCAAAACACATTTTGAGCTACTGCTTTCTTATTGACTTCTTTCTAGTTTTCTG
AACAAATTAGTCTGTAATTTTTTATTTTTTTCTATTTATGGCTGACCCTTGTGGATTTAC
GAGGCCGTGCGAGAGGAATTATGTATCTTACACACACACGTTTGGCAC

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               463-885, gnl|bosTau2|chr28 (12792320-12792751)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               463-885, gnl|bosTau2|chr28 (12792320-12792751)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               cga (0.279096)
               

               
               nmm (0.265604)
               

               
               med (0.232504)
               

               
               fty (0.17584)
               

               
               lnt (0.142308)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cga (0.279096)
               

               
               nmm (0.265604)
               

               
               med (0.232504)
               

               
               fty (0.17584)
               

               
               lnt (0.142308)

	cga (0.279096)
	nmm (0.265604)
	med (0.232504)
	fty (0.17584)
	lnt (0.142308)