Non-Coding RNA Search

Ss1.1-Utr1-UTR01D110081.5

Sequence:


               
               TGGGCAAGTGGAAATATTTAACTCTCAAGAAGCAGATTTATTCACAGATTGTAGCACTCC
CATATTTCTAGTGAGAAATCTGCTTTGTGCTAAAATAGTAATTTTCAAATATATGTTAAC
CATGAAAAGGAAATCTTAGAGTAAAGCCAAATTTGTGAAATGATTTAAAAACAGGACCCA
ACTTAAAGATCTCTCAAGTACAATTTTAAAACTTGTGCTCAAGTCCTGTCTTAATTATTG
TAATGCATTTCTCTATGGTCACTAATTTAACAAATTCAAGGAACCCAGGATACAACCAAG
AATTTAGAAGGAAGTGAAACCTGCACAATCAAAACAGATGCCATAAGAGCCCAAGATCCA
AAATTGTGCCAGCGGCTCCCAGCTAGAGACAGTTTCCCCTCTTTCCAGAAGATGCTGGGA
AACTAAAGGGGGCTTTTTCGGCTGTGACATTTATTAGCGGGGGGTTCCCGTTGGCATGTA
ATCATGAAGGACACCACCCCCACCCCACCCCTGCCCAAGCACACCACAGGGCATAGGACA
GCCTGGCACAGCAAAAAATTATGCCCCCGAAAGTGCCAGTAAACCGCCAGTGTAAATGAT
CTTATTTCAAGAGACAGGGCAAATTACCGGTAGAAGCAAAATTAGAAGGGCAGGAGTTCC
CGTCGTGGCGCAGTGGTTAAGGAATCCGACTAGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGCAAGTGGAAATATTTAACTCTCAAGAAGCAGATTTATTCACAGATTGTAGCACTCC
CATATTTCTAGTGAGAAATCTGCTTTGTGCTAAAATAGTAATTTTCAAATATATGTTAAC
CATGAAAAGGAAATCTTAGAGTAAAGCCAAATTTGTGAAATGATTTAAAAACAGGACCCA
ACTTAAAGATCTCTCAAGTACAATTTTAAAACTTGTGCTCAAGTCCTGTCTTAATTATTG
TAATGCATTTCTCTATGGTCACTAATTTAACAAATTCAAGGAACCCAGGATACAACCAAG
AATTTAGAAGGAAGTGAAACCTGCACAATCAAAACAGATGCCATAAGAGCCCAAGATCCA
AAATTGTGCCAGCGGCTCCCAGCTAGAGACAGTTTCCCCTCTTTCCAGAAGATGCTGGGA
AACTAAAGGGGGCTTTTTCGGCTGTGACATTTATTAGCGGGGGGTTCCCGTTGGCATGTA
ATCATGAAGGACACCACCCCCACCCCACCCCTGCCCAAGCACACCACAGGGCATAGGACA
GCCTGGCACAGCAAAAAATTATGCCCCCGAAAGTGCCAGTAAACCGCCAGTGTAAATGAT
CTTATTTCAAGAGACAGGGCAAATTACCGGTAGAAGCAAAATTAGAAGGGCAGGAGTTCC
CGTCGTGGCGCAGTGGTTAAGGAATCCGACTAGGAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-652, gnl|bosTau2|chr22 (8071722-8071120)
               

               
               5-652, gnl|Hg17|chr3 (37006687-37006082)
               

               
               5-652, gnl|Mm7|chr9 (110972524-110973097)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-652, gnl|bosTau2|chr22 (8071722-8071120)
               

               
               5-652, gnl|Hg17|chr3 (37006687-37006082)
               

               
               5-652, gnl|Mm7|chr9 (110972524-110973097)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hyp (0.142837)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)

	5-652, gnl\|bosTau2\|chr22 (8071722-8071120)
	5-652, gnl\|Hg17\|chr3 (37006687-37006082)
	5-652, gnl\|Mm7\|chr9 (110972524-110973097)