Non-Coding RNA Search

Ss1.1-Utr1-UTR01G080092.5

Sequence:


               
               CCTCGTGCCGAATCGGCACGAGGGTACAGCCAGACCTTGTTTGGCCAATCGAATGTGTGA
TCTAGCATTTCTAGGACAGAGGTACCTGGGATATCAGGTTTAAATTCTTCTGTTGGATGG
GTAGAGCCAAGCTGTTCAGTCCAACAATCAGTTTGGTCCTCTTCTTACCACCTTCCTACT
AAAGATTTTTGAAGGAGGTGGGTATATATTAGGGGCGGCCATGGGGAGAGGATATAGATT
TAGCTTACTCTCCATTCTAGGTCTATATTTGCTTTCAAAAACCGAGACTTCTAAAATTAG
TCCTTTGAATTAGTCAATTAAATTGGATGTATTAGAAAGTGTCTGCTTTGGTATTTATGG
TTTTTGACCAAAGAACTAATTGCCTTGTGTATTCTATTTCTGTGGGTTCCATTTACACTG
AAATCTTGTTGCATGGATAATTCCAGCCTCTCAATGGTCTGGCAAATTGAGAACTGGAGC
AGAAGCTTAAATTTACTGTAGCTGGCAATATGACTATAACATCCATTTGCTGAGTTGTTT
TTTTTCTAAAAATGTGGCATTGGGGGGAACCAGCATGTTTAGTACATGAAATATTTTCAT
TTGGTTGTACCCTCAGCCACATGTTTATCAGTGAAGATGCTTGAAAAGGAAGACAGTTAA
AGCAGATACTAGGCTTGTTCGACTTCCCTTCAGTTTGCAGGGAAACACCCATGGCAGGTG
TTTCCTGTTGATTAGTAAATATCCTCCACACAATTTCTGTTTAAAATTCAGCTATTAATA
AAAATGGGTACTTTTGTAATTGGTACGTCTTGAATATTCTTAGGGAAACAGAAGCAAGTC
ATTGACATGCTAGACAGAATCAATGGAAAAGTTCCTTAATCTGAGCAACAGTAGTCAGTA
GTCATTTATTATTCTATTTCATTAACAAGCCCTCTCTTCAGTAAGGGAGTTCTATTTTAA
AATCCCCATATGGCTGGTGACTACAGTAATGAAAGTTTCCTGGCTGGAATCAGGAGGTGT
GAGGATGTTGTAGCCTCATTTTACTGGGCCTTGCAGGGCTTGCATTCCTAAACTGGTTGT
GGTGGGGAAAGAATTGTCAGCTTGTAATGCTAATGTAACTTGGTTCTGTCAAGGGTGCTG
GATCAAAGGCATTTAGGAGAATGAGTTCTTTTCTTTGCTGTTAACTGATTATGTGACTGG
TGAGTTCCTCAACACCCTCTGGCTCTGTAATTTTCCCATCTGTAAAATGAAGAGTAGAGA
TTTGGATGGTGGTGAAACAGAAAACAAGGAGGAAAGATGAAAATGCCCACTGGTCCTAGT
GTTCTAGTGATTATGTTTCTGTTACATGTTCCTTCTGCTTGAAAATAATCCAAAACACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTCGTGCCGAATCGGCACGAGGGTACAGCCAGACCTTGTTTGGCCAATCGAATGTGTGA
TCTAGCATTTCTAGGACAGAGGTACCTGGGATATCAGGTTTAAATTCTTCTGTTGGATGG
GTAGAGCCAAGCTGTTCAGTCCAACAATCAGTTTGGTCCTCTTCTTACCACCTTCCTACT
AAAGATTTTTGAAGGAGGTGGGTATATATTAGGGGCGGCCATGGGGAGAGGATATAGATT
TAGCTTACTCTCCATTCTAGGTCTATATTTGCTTTCAAAAACCGAGACTTCTAAAATTAG
TCCTTTGAATTAGTCAATTAAATTGGATGTATTAGAAAGTGTCTGCTTTGGTATTTATGG
TTTTTGACCAAAGAACTAATTGCCTTGTGTATTCTATTTCTGTGGGTTCCATTTACACTG
AAATCTTGTTGCATGGATAATTCCAGCCTCTCAATGGTCTGGCAAATTGAGAACTGGAGC
AGAAGCTTAAATTTACTGTAGCTGGCAATATGACTATAACATCCATTTGCTGAGTTGTTT
TTTTTCTAAAAATGTGGCATTGGGGGGAACCAGCATGTTTAGTACATGAAATATTTTCAT
TTGGTTGTACCCTCAGCCACATGTTTATCAGTGAAGATGCTTGAAAAGGAAGACAGTTAA
AGCAGATACTAGGCTTGTTCGACTTCCCTTCAGTTTGCAGGGAAACACCCATGGCAGGTG
TTTCCTGTTGATTAGTAAATATCCTCCACACAATTTCTGTTTAAAATTCAGCTATTAATA
AAAATGGGTACTTTTGTAATTGGTACGTCTTGAATATTCTTAGGGAAACAGAAGCAAGTC
ATTGACATGCTAGACAGAATCAATGGAAAAGTTCCTTAATCTGAGCAACAGTAGTCAGTA
GTCATTTATTATTCTATTTCATTAACAAGCCCTCTCTTCAGTAAGGGAGTTCTATTTTAA
AATCCCCATATGGCTGGTGACTACAGTAATGAAAGTTTCCTGGCTGGAATCAGGAGGTGT
GAGGATGTTGTAGCCTCATTTTACTGGGCCTTGCAGGGCTTGCATTCCTAAACTGGTTGT
GGTGGGGAAAGAATTGTCAGCTTGTAATGCTAATGTAACTTGGTTCTGTCAAGGGTGCTG
GATCAAAGGCATTTAGGAGAATGAGTTCTTTTCTTTGCTGTTAACTGATTATGTGACTGG
TGAGTTCCTCAACACCCTCTGGCTCTGTAATTTTCCCATCTGTAAAATGAAGAGTAGAGA
TTTGGATGGTGGTGAAACAGAAAACAAGGAGGAAAGATGAAAATGCCCACTGGTCCTAGT
GTTCTAGTGATTATGTTTCTGTTACATGTTCCTTCTGCTTGAAAATAATCCAAAACACAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               24-533, gnl|bosTau2|chr22 (18351791-18352289)
               


               
               540-1255, gnl|bosTau2|chr22 (18352530-18353244)
               

               
               540-1255, gnl|Hg17|chr3 (5198451-5199160)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               24-533, gnl|bosTau2|chr22 (18351791-18352289)
               


               
               540-1255, gnl|bosTau2|chr22 (18352530-18353244)
               

               
               540-1255, gnl|Hg17|chr3 (5198451-5199160)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	24-533, gnl\|bosTau2\|chr22 (18351791-18352289)

	540-1255, gnl\|bosTau2\|chr22 (18352530-18353244)
	540-1255, gnl\|Hg17\|chr3 (5198451-5199160)