Ss1.1-Utr1-UTR01G100101.5
|
AAGATGGCTGCTGCGTGTCGCAGCGTGAAGGTAACTGGGTTTTCTCCCCTGCTGCTTGCC
CCGCTGCCCCGGCTGGGATGGCGCGGCCGTAGAACTAAGATGGCTGCTGCGTGTCGCAGC
GTGAAGGGTCTGGTGGCTATAATAACCGGTGGAGCCTCGGGCCTAGGCCTCGCCACGGCG
GAGCGACTGGTGGGGCAGGGGGCTTCTGCTGTACTTCTGGACCTGCCCCACTCAGATGGG
GAGGCCCAGGCGAAGAAGTTAGGGAAGAGCTGCGCCTTTGCCCCAGCCGACGTGACCTCA
GAGAAGGACGTGCAAGCAGCCCTGACTCTAGCAAAAGAAAAGTTTGGCCGCGTGGATGTG
GCAGTCAACTGTGCAGGCATTGGAGTGGCCAGCAAGACATACAACTTAAAGAAGAGCCAG
GCCCATACCTTGGAGGACTTTCAGCGAGTTCTCAATGTGAATCTCACAGGCACCTTCAAT
GTGATCCGCCTAGTGGCTGGCGAGATGGGCCAGAATGAACCAGACCAGGGAGGCCAACGT
GGGGTCATCATCAACACTGCCAGCATAGCTGCCTTTGAGGGCCAGGTTGGACAAGCTGCA
TACTCTGCCTCCAAGGGGGGCATAGTGAGCATGACACTGCCCATTGCTCGGGATCTGGCC
CCCATGGGCATCCGGGTGATGACCATTGCTCCAGGCCTATTTGGCACCCCGCTGTTGAAC
ACCCTCCCAGATAAAGTGCGCAACTTCCTGGCCAACCAGGTGCCCTTCCCCAGCCGACTG
GGAGACCCTGCTGAGTATGCTCATCTGGCGCAGGTCATCATCGAGAACCCATTCCTCAAT
GGAGAGGTCATCCGGCTGGATGGGGCCATCCGGATGCAGCCTTGAAGGGGGAGGGCAGGG
CAGAGAAAACACATGCTCTTCTGTCCCTCCTCCTCCTGGAGTACTGTACTCCAGCGTGGG
AGGGAGGAAGTCCAATAGCCATTTTGTAACCTCTGCCCACGTCACCCTCTGTGCCTAATA
AAGTCTCTTTCTCGCAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAGATGGCTGCTGCGTGTCGCAGCGTGAAGGTAACTGGGTTTTCTCCCCTGCTGCTTGCC
CCGCTGCCCCGGCTGGGATGGCGCGGCCGTAGAACTAAGATGGCTGCTGCGTGTCGCAGC
GTGAAGGGTCTGGTGGCTATAATAACCGGTGGAGCCTCGGGCCTAGGCCTCGCCACGGCG
GAGCGACTGGTGGGGCAGGGGGCTTCTGCTGTACTTCTGGACCTGCCCCACTCAGATGGG
GAGGCCCAGGCGAAGAAGTTAGGGAAGAGCTGCGCCTTTGCCCCAGCCGACGTGACCTCA
GAGAAGGACGTGCAAGCAGCCCTGACTCTAGCAAAAGAAAAGTTTGGCCGCGTGGATGTG
GCAGTCAACTGTGCAGGCATTGGAGTGGCCAGCAAGACATACAACTTAAAGAAGAGCCAG
GCCCATACCTTGGAGGACTTTCAGCGAGTTCTCAATGTGAATCTCACAGGCACCTTCAAT
GTGATCCGCCTAGTGGCTGGCGAGATGGGCCAGAATGAACCAGACCAGGGAGGCCAACGT
GGGGTCATCATCAACACTGCCAGCATAGCTGCCTTTGAGGGCCAGGTTGGACAAGCTGCA
TACTCTGCCTCCAAGGGGGGCATAGTGAGCATGACACTGCCCATTGCTCGGGATCTGGCC
CCCATGGGCATCCGGGTGATGACCATTGCTCCAGGCCTATTTGGCACCCCGCTGTTGAAC
ACCCTCCCAGATAAAGTGCGCAACTTCCTGGCCAACCAGGTGCCCTTCCCCAGCCGACTG
GGAGACCCTGCTGAGTATGCTCATCTGGCGCAGGTCATCATCGAGAACCCATTCCTCAAT
GGAGAGGTCATCCGGCTGGATGGGGCCATCCGGATGCAGCCTTGAAGGGGGAGGGCAGGG
CAGAGAAAACACATGCTCTTCTGTCCCTCCTCCTCCTGGAGTACTGTACTCCAGCGTGGG
AGGGAGGAAGTCCAATAGCCATTTTGTAACCTCTGCCCACGTCACCCTCTGTGCCTAATA
AAGTCTCTTTCTCGCAAAAAAAAAAAAAAAAAAAAA
|
|
gi|27805907|ref|NP_776759.1| |
Protein identifier
|
gi|27805907|ref|NP_776759.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
292-458, gnl|bosTau2|chrX (594854-594688) |
|
292-458, gnl|canFam2|chrX (45136539-45136759) |
|
292-458, gnl|danRer3|chrNA (31081724-31081936) |
|
292-458, gnl|dasNov1|scaffold_42619 (2779-2552) |
|
292-458, gnl|echTel1|scaffold_278577 (40382-40595) |
|
292-458, gnl|fr1|chrUn (295573944-295573753) |
|
292-458, gnl|hg17|chrX (53342210-53342428) |
|
292-458, gnl|Hg17|chrX (53342380-53342214) |
|
292-458, gnl|loxAfr1|scaffold_8512 (55451-55664) |
|
292-458, gnl|mm7|chrX (146762208-146761988) |
|
292-458, gnl|Mm7|chrX (146762036-146762202) |
|
292-458, gnl|monDom2|scaffold_255 (11434-11630) |
|
292-458, gnl|oryCun1|scaffold_185387 (767-549) |
|
292-458, gnl|panTro1|chrX (54591439-54591657) |
|
292-458, gnl|rheMac2|chrX (51761079-51761297) |
|
292-458, gnl|rn3|chrX (41544378-41544158) |
|
292-458, gnl|tetNig1|chr9 (10388863-10388677) |
|
292-458, gnl|xenTro1|scaffold_82 (1508088-1508303) |
| |
|
690-1036, gnl|bosTau2|chrX (594058-593719) |
|
690-1036, gnl|Hg17|chrX (53341568-53341232) |
|
690-1036, gnl|Mm7|chrX (146762809-146763116) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
292-458, gnl|bosTau2|chrX (594854-594688) |
|
292-458, gnl|canFam2|chrX (45136539-45136759) |
|
292-458, gnl|danRer3|chrNA (31081724-31081936) |
|
292-458, gnl|dasNov1|scaffold_42619 (2779-2552) |
|
292-458, gnl|echTel1|scaffold_278577 (40382-40595) |
|
292-458, gnl|fr1|chrUn (295573944-295573753) |
|
292-458, gnl|hg17|chrX (53342210-53342428) |
|
292-458, gnl|Hg17|chrX (53342380-53342214) |
|
292-458, gnl|loxAfr1|scaffold_8512 (55451-55664) |
|
292-458, gnl|mm7|chrX (146762208-146761988) |
|
292-458, gnl|Mm7|chrX (146762036-146762202) |
|
292-458, gnl|monDom2|scaffold_255 (11434-11630) |
|
292-458, gnl|oryCun1|scaffold_185387 (767-549) |
|
292-458, gnl|panTro1|chrX (54591439-54591657) |
|
292-458, gnl|rheMac2|chrX (51761079-51761297) |
|
292-458, gnl|rn3|chrX (41544378-41544158) |
|
292-458, gnl|tetNig1|chr9 (10388863-10388677) |
|
292-458, gnl|xenTro1|scaffold_82 (1508088-1508303) |
| |
|
690-1036, gnl|bosTau2|chrX (594058-593719) |
|
690-1036, gnl|Hg17|chrX (53341568-53341232) |
|
690-1036, gnl|Mm7|chrX (146762809-146763116) |
|
cli (2.13936) |
|
amn (0.417711) |
|
col (0.390016) |
|
elu (0.385356) |
|
eye (0.341006) |
|
lun (0.300978) |
|
pty (0.285429) |
|
ssp (0.271039) |
|
pla (0.267344) |
|
mas (0.210305) |
|
fcc (0.197785) |
|
nlu (0.191681) |
|
nep (0.183925) |
|
fty (0.17584) |
|
ton (0.1755) |
|
cje (0.165235) |
|
nco (0.161734) |
|
csp (0.161186) |
|
hyp (0.142837) |
|
hlv (0.139256) |
|
nca (0.136874) |
|
ste (0.135208) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
med (0.116252) |
|
nbm (0.0993246) |
|
cli (2.13936) |
|
amn (0.417711) |
|
col (0.390016) |
|
elu (0.385356) |
|
eye (0.341006) |
|
lun (0.300978) |
|
pty (0.285429) |
|
ssp (0.271039) |
|
pla (0.267344) |
|
mas (0.210305) |
|
fcc (0.197785) |
|
nlu (0.191681) |
|
nep (0.183925) |
|
fty (0.17584) |
|
ton (0.1755) |
|
cje (0.165235) |
|
nco (0.161734) |
|
csp (0.161186) |
|
hyp (0.142837) |
|
hlv (0.139256) |
|
nca (0.136874) |
|
ste (0.135208) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
med (0.116252) |
|
nbm (0.0993246) |
