Non-Coding RNA Search

Ss1.1-Utr2-C0001780_E04.5

Sequence:


               
               GTGGCTTCAGTTCCTCCTAAAAAGAACTCCGATCCAAAGTCAGCTACTCAAAAAAGGTCC
CTGTAGGTAAGTGTTATTGGCAGGAGCCTCTTATCAGCTGGCACAGGGAAACATGACACC
AAGCACAGATTGATGCACAGCAACCTGGCTAGATGTTTATCAGGTGGACTGTCTTACCCG
AGCATTTCCCTCTTACCCTAAAAGTAGGCCAACTGTACAAATGAGCATAGGCCCGCAGGC
TTAGAATCAAGTAAATTTAGGTATGACCTGAAATAAAATAAGAAATTAACATAAAAATTA
TACAAAGTGAAATCTAATTGAGTTCTCTGCAAATATTTGTAAACCCTTTGAAAATATTTA
ACATTTTCTCAATGTTAGCCATTACATTTAAAGAAACTTCTTTTTCATCCCAGTTGTCTT
ATTTATGCTTCATTAATAATTGACTATCAGATTTTATTTTGCCCATGTGTTTATTTAATT
CACCTGAGTCTGAGGGCTGAGTTTATCAACAGTAGCTCTTCCTCAGGTTGATGATCCTCC
GTGTGCCCCCTGCAGCACACCAGTATCATGGAAACGGTTTCATTGGTCACTGAACAATTT
CAATGGGTTTGCTGGGTGCTAGTTTCCTCTTAAGTAATAGCTACTTGCCCATTTGGCTGA
TTTTAGGAATGGGATCAAAACTGGTCCCTGATGGAGTTAGAATCAGATTTTGTGAGCTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGCTTCAGTTCCTCCTAAAAAGAACTCCGATCCAAAGTCAGCTACTCAAAAAAGGTCC
CTGTAGGTAAGTGTTATTGGCAGGAGCCTCTTATCAGCTGGCACAGGGAAACATGACACC
AAGCACAGATTGATGCACAGCAACCTGGCTAGATGTTTATCAGGTGGACTGTCTTACCCG
AGCATTTCCCTCTTACCCTAAAAGTAGGCCAACTGTACAAATGAGCATAGGCCCGCAGGC
TTAGAATCAAGTAAATTTAGGTATGACCTGAAATAAAATAAGAAATTAACATAAAAATTA
TACAAAGTGAAATCTAATTGAGTTCTCTGCAAATATTTGTAAACCCTTTGAAAATATTTA
ACATTTTCTCAATGTTAGCCATTACATTTAAAGAAACTTCTTTTTCATCCCAGTTGTCTT
ATTTATGCTTCATTAATAATTGACTATCAGATTTTATTTTGCCCATGTGTTTATTTAATT
CACCTGAGTCTGAGGGCTGAGTTTATCAACAGTAGCTCTTCCTCAGGTTGATGATCCTCC
GTGTGCCCCCTGCAGCACACCAGTATCATGGAAACGGTTTCATTGGTCACTGAACAATTT
CAATGGGTTTGCTGGGTGCTAGTTTCCTCTTAAGTAATAGCTACTTGCCCATTTGGCTGA
TTTTAGGAATGGGATCAAAACTGGTCCCTGATGGAGTTAGAATCAGATTTTGTGAGCTCT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-477, gnl|bosTau2|chr16 (19676421-19676891)
               

               
               2-477, gnl|Hg17|chr1 (243255725-243256196)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-477, gnl|bosTau2|chr16 (19676421-19676891)
               

               
               2-477, gnl|Hg17|chr1 (243255725-243256196)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)

	2-477, gnl\|bosTau2\|chr16 (19676421-19676891)
	2-477, gnl\|Hg17\|chr1 (243255725-243256196)