Non-Coding RNA Search

Ss1.1-Utr2-C0001797_D06.5

Sequence:


               
               GCTTTCTCCTTACCCTTTAAGGCTTGGCTCAAATGACCTCCTCCTCCATCATCTCTTCCT
CTGCTATTCCAGCCTAAGGGGGTCCTCAGCTTTTCTTTAACACCTAGCTGGTCACGTGGC
CTTGTGTCATACTCTCTGTTGCCGTCCATTTGCACACACATGTTTTACTTCTCCCGCTAG
GATATAAGCTTCTGAGTACAGTCATGACCTGGTACATACCTAGTAATAACCCTTTGGCAT
CTAGCAGAAGCCAGTATTTAATGAATGGAATGAGTAAATGCATATCTTTCTTTAAAAAAA
TTGTATTTTTTGCCCCCAAGACTTAACTTGCCTAAAAAGAAAAAGAAAGCTAGTGGAGAG
GATGAGGAACAAGACCCGTCCATGAAGAATGACGCCAGTTCTGAGCAGCTGGATGTAGAC
GGAGACTCCTCCAGTGAGGTGTCCAGTGAGATCAACTTCAGTTACGAGTACGCGCAGATG
GAGGTGACCATGAAGGCCCTGGGCAGGAATGGTGAGCAGACCCGTCGTGCGTTTAAGAAT
CTCAAAGGTGGTAGAATGTTAGAGATGTTTGTAGCCAAGACTTTTTAAATGTTAGGAAAA
AGGAAATCTTCAATTGTTCTCTGTACTCAGTTCTTTTGTGTCTTTGGCTTTCACTTAGTA
TACTTACTAAAACTTACTCTTTCTGCCCTGATACACAAATGACTGCAACATTTATTCTCA
TTGATAGAATCTCCCAGATTCGAAACTTGACTGCCACTGGCTTACTCGTGTAGTGGATTT
CTGGCGCATTAACTCGGTCTTAGGTTATGTGTAGAAGGTACATACCTGCTTTTTCTATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTTTCTCCTTACCCTTTAAGGCTTGGCTCAAATGACCTCCTCCTCCATCATCTCTTCCT
CTGCTATTCCAGCCTAAGGGGGTCCTCAGCTTTTCTTTAACACCTAGCTGGTCACGTGGC
CTTGTGTCATACTCTCTGTTGCCGTCCATTTGCACACACATGTTTTACTTCTCCCGCTAG
GATATAAGCTTCTGAGTACAGTCATGACCTGGTACATACCTAGTAATAACCCTTTGGCAT
CTAGCAGAAGCCAGTATTTAATGAATGGAATGAGTAAATGCATATCTTTCTTTAAAAAAA
TTGTATTTTTTGCCCCCAAGACTTAACTTGCCTAAAAAGAAAAAGAAAGCTAGTGGAGAG
GATGAGGAACAAGACCCGTCCATGAAGAATGACGCCAGTTCTGAGCAGCTGGATGTAGAC
GGAGACTCCTCCAGTGAGGTGTCCAGTGAGATCAACTTCAGTTACGAGTACGCGCAGATG
GAGGTGACCATGAAGGCCCTGGGCAGGAATGGTGAGCAGACCCGTCGTGCGTTTAAGAAT
CTCAAAGGTGGTAGAATGTTAGAGATGTTTGTAGCCAAGACTTTTTAAATGTTAGGAAAA
AGGAAATCTTCAATTGTTCTCTGTACTCAGTTCTTTTGTGTCTTTGGCTTTCACTTAGTA
TACTTACTAAAACTTACTCTTTCTGCCCTGATACACAAATGACTGCAACATTTATTCTCA
TTGATAGAATCTCCCAGATTCGAAACTTGACTGCCACTGGCTTACTCGTGTAGTGGATTT
CTGGCGCATTAACTCGGTCTTAGGTTATGTGTAGAAGGTACATACCTGCTTTTTCTATAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               224-815, gnl|bosTau2|chr18 (6237561-6236988)
               

               
               224-815, gnl|Hg17|chr8 (29062304-29061659)
               

               
               224-815, gnl|Mm7|chr14 (59607526-59608060)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               224-815, gnl|bosTau2|chr18 (6237561-6236988)
               

               
               224-815, gnl|Hg17|chr8 (29062304-29061659)
               

               
               224-815, gnl|Mm7|chr14 (59607526-59608060)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cbl (0.114797)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.114797)

	224-815, gnl\|bosTau2\|chr18 (6237561-6236988)
	224-815, gnl\|Hg17\|chr8 (29062304-29061659)
	224-815, gnl\|Mm7\|chr14 (59607526-59608060)