Non-Coding RNA Search

Ss1.1-Utr2-C0001802_G17.5

Sequence:


               
               CTTTCCTGAATTGTCTTTGTAAAAGTATTATTGAATTTTCAATTTGTAATTTCTTTTGAA
AATGACCATGCTCGAATAAAAATGTAGCCAAACTAAGAATGTAGTTAATGAGTTCTGTAC
TTTTAGAGAGTTTTCCTTCAATGACCATTAACATGTAACATGCTTTATGCTTATAATAAT
GCTAATTATGTTTTTCCATATAATTTTAGTTTAGCAATAATTTTGACTGGTACCAATAAC
TGTTTTTTAAAATTCCATACCTATGTACAGCAATTTTACAGCTTTTCTCAACTGATCCTG
ATTCCAGATTGTGTATTTTTATGTGAGGTTATATTATTCAGATTTAGTCTATTTACTTTA
CAGACATTTCTACTTTTGCATTACAAGTATTTAGAGATTATGTGTTAAAAATTCACTTCT
CTGTCCAAGGGGTCTTTGTGATTTATTCAAAAAAGTCTAATTTCAAAAAGACAGCTATTA
TTCAATGTTATTTATAATATGTAACCTTTTTTAAAGGATTGGGATAGTTTAATCTCACTT
TTTGAAATGCAGACTGTACTTTACCATTTATCTGAACCTAGAAAGCGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTCCTGAATTGTCTTTGTAAAAGTATTATTGAATTTTCAATTTGTAATTTCTTTTGAA
AATGACCATGCTCGAATAAAAATGTAGCCAAACTAAGAATGTAGTTAATGAGTTCTGTAC
TTTTAGAGAGTTTTCCTTCAATGACCATTAACATGTAACATGCTTTATGCTTATAATAAT
GCTAATTATGTTTTTCCATATAATTTTAGTTTAGCAATAATTTTGACTGGTACCAATAAC
TGTTTTTTAAAATTCCATACCTATGTACAGCAATTTTACAGCTTTTCTCAACTGATCCTG
ATTCCAGATTGTGTATTTTTATGTGAGGTTATATTATTCAGATTTAGTCTATTTACTTTA
CAGACATTTCTACTTTTGCATTACAAGTATTTAGAGATTATGTGTTAAAAATTCACTTCT
CTGTCCAAGGGGTCTTTGTGATTTATTCAAAAAAGTCTAATTTCAAAAAGACAGCTATTA
TTCAATGTTATTTATAATATGTAACCTTTTTTAAAGGATTGGGATAGTTTAATCTCACTT
TTTGAAATGCAGACTGTACTTTACCATTTATCTGAACCTAGAAAGCGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-588, gnl|bosTau2|chr2 (35499979-35499392)
               

               
               1-588, gnl|Hg17|chr2 (144979410-144978821)
               

               
               1-588, gnl|Mm7|chr2 (44994527-44993935)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-588, gnl|bosTau2|chr2 (35499979-35499392)
               

               
               1-588, gnl|Hg17|chr2 (144979410-144978821)
               

               
               1-588, gnl|Mm7|chr2 (44994527-44993935)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               gul (0.177588)
               

               
               ese (0.126502)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               ese (0.126502)

	1-588, gnl\|bosTau2\|chr2 (35499979-35499392)
	1-588, gnl\|Hg17\|chr2 (144979410-144978821)
	1-588, gnl\|Mm7\|chr2 (44994527-44993935)