Non-Coding RNA Search

Ss1.1-Utr2-C0001803_J16.5

Sequence:


               
               CTCGGTGGCCTTTAAGAGGAACAACCATCTGCATTTAAAACTCAGTGCCTTTTGATTTCA
GCTTTCCTGTCGAATGAGAAAACATGTGGTTTTGTAATTTGTTTAAAACCCTAAATAGTT
ACGTGTTTTCTGTTTTAATCTGCGAGGGTAGTACCATTATAAACATACAGTGTACAGTCA
GACCAGACAAAACTTCTTATGTATTCTCTAGGAAGTGGATATGTGGAAGCAACCAAGCCT
GGTGTCCTGTGACTGCTTAACAAACCTTCTTCCTTTGGGCAGTGAGTTTGAAAATCAGAG
GTGCTTTGTACTGTGTGTTTGTGTATGTGGGGATATTCTCTCATCAGGACAGTATAACTC
GTAGAAGAGTAGGCTTGGTTGGTTAATGTCGGCTTTCTCACCAGGCCACCAGAAGCCGTG
TGTCATAGTGTCAGGTTATTTATTTTATAATGTCCATCGTGCTAGTAGTAACCAAGAAGA
CGTTAGGAAGTTTCCTCTCAACAGTAAATAGCAGAGTGTTAGGAGAGGTAATTCTGATTA
ATACTCTTCATTCTATTTCAAAGAAGGGTATATGTGGCTTTGTCTGAAACCAGATATTAG
AATTATAAACTTAACAAATCTGGTCAGTTCTTCAGATACACTGGAACTCTTTTAATGCTA
ATGTTGAGGCCGTGGCAAACATCTTTTTAGGATGTGTTGTAGCAAAATTCATCTGTCTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCGGTGGCCTTTAAGAGGAACAACCATCTGCATTTAAAACTCAGTGCCTTTTGATTTCA
GCTTTCCTGTCGAATGAGAAAACATGTGGTTTTGTAATTTGTTTAAAACCCTAAATAGTT
ACGTGTTTTCTGTTTTAATCTGCGAGGGTAGTACCATTATAAACATACAGTGTACAGTCA
GACCAGACAAAACTTCTTATGTATTCTCTAGGAAGTGGATATGTGGAAGCAACCAAGCCT
GGTGTCCTGTGACTGCTTAACAAACCTTCTTCCTTTGGGCAGTGAGTTTGAAAATCAGAG
GTGCTTTGTACTGTGTGTTTGTGTATGTGGGGATATTCTCTCATCAGGACAGTATAACTC
GTAGAAGAGTAGGCTTGGTTGGTTAATGTCGGCTTTCTCACCAGGCCACCAGAAGCCGTG
TGTCATAGTGTCAGGTTATTTATTTTATAATGTCCATCGTGCTAGTAGTAACCAAGAAGA
CGTTAGGAAGTTTCCTCTCAACAGTAAATAGCAGAGTGTTAGGAGAGGTAATTCTGATTA
ATACTCTTCATTCTATTTCAAAGAAGGGTATATGTGGCTTTGTCTGAAACCAGATATTAG
AATTATAAACTTAACAAATCTGGTCAGTTCTTCAGATACACTGGAACTCTTTTAATGCTA
ATGTTGAGGCCGTGGCAAACATCTTTTTAGGATGTGTTGTAGCAAAATTCATCTGTCTGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               16-720, gnl|bosTau2|chr10 (8260640-8259937)
               

               
               16-720, gnl|Hg17|chr14 (51864154-51864867)
               

               
               16-720, gnl|Mm7|chr14 (40319723-40320389)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               16-720, gnl|bosTau2|chr10 (8260640-8259937)
               

               
               16-720, gnl|Hg17|chr14 (51864154-51864867)
               

               
               16-720, gnl|Mm7|chr14 (40319723-40320389)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	16-720, gnl\|bosTau2\|chr10 (8260640-8259937)
	16-720, gnl\|Hg17\|chr14 (51864154-51864867)
	16-720, gnl\|Mm7\|chr14 (40319723-40320389)