Non-Coding RNA Search

Ss1.1-Utr2-C0001807_B19.5

Sequence:


               
               GCCCATGGCTCTGATCAGCTACAGCGTGCTTTGGGACAGGTGGACAAAATCCACGCAGTC
CCTGCCGCCTCCCCCCTCTGGGGTCGAGAGTTGGCCAAAGCTCCAGTCCACAGCTGGAAG
CCACAGCCTGCAGCACTGTTTCCGCTCTGGGATCTTGTAAGTTACTTTTTTAGGCTGTGG
TTTGGTGAAAGGAACCAACCCATTAACGATTTTTTTCCCCAGAAGCCACCGAATAATTCT
TTTTGGCGCGTTTTCACCTTCCTCTTGGCTGTCTGGTTTTGGAGCAGATGGGAAGAGGCA
GGGGTGTGCCCTGGAGACGGATGGCCTGCCCTGCTCTGGCCTGTGTGTCCTGAGCGTGTG
CTCTACCTGTTGGGTCAGTTGCATATGTTTCCACCCCACCCTGGAGCAGCAGCCTTGGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCATGGCTCTGATCAGCTACAGCGTGCTTTGGGACAGGTGGACAAAATCCACGCAGTC
CCTGCCGCCTCCCCCCTCTGGGGTCGAGAGTTGGCCAAAGCTCCAGTCCACAGCTGGAAG
CCACAGCCTGCAGCACTGTTTCCGCTCTGGGATCTTGTAAGTTACTTTTTTAGGCTGTGG
TTTGGTGAAAGGAACCAACCCATTAACGATTTTTTTCCCCAGAAGCCACCGAATAATTCT
TTTTGGCGCGTTTTCACCTTCCTCTTGGCTGTCTGGTTTTGGAGCAGATGGGAAGAGGCA
GGGGTGTGCCCTGGAGACGGATGGCCTGCCCTGCTCTGGCCTGTGTGTCCTGAGCGTGTG
CTCTACCTGTTGGGTCAGTTGCATATGTTTCCACCCCACCCTGGAGCAGCAGCCTTGGTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               8-420, gnl|bosTau2|chr19 (45438251-45437840)
               

               
               8-420, gnl|Hg17|chr17 (77470516-77470076)
               

               
               8-420, gnl|Mm7|chr11 (120735259-120734840)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-420, gnl|bosTau2|chr19 (45438251-45437840)
               

               
               8-420, gnl|Hg17|chr17 (77470516-77470076)
               

               
               8-420, gnl|Mm7|chr11 (120735259-120734840)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hyp (0.142837)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)
               

               
               ebs (0.118301)

	8-420, gnl\|bosTau2\|chr19 (45438251-45437840)
	8-420, gnl\|Hg17\|chr17 (77470516-77470076)
	8-420, gnl\|Mm7\|chr11 (120735259-120734840)