Non-Coding RNA Search

Ss1.1-Utr2-C0001815_J14.5

Sequence:


               
               CAATATCCTTAACAGTGCTGATGTTCTGAGATTCTCATTTGTAGAATGACCTTTGATGTA
TCATTCATTTTTGTTGCTCATCATATAAATATCGGATTAAGTTTAGAGTTAAGATTAAGT
TAAGATTAGGTCATTGGTGTCACTGCATGTATCATTAAAGATCCAAGAGGAATTGTTGGG
CAGCAGGATTTGTGCTATGTGTTACATGGAGTGAGGGTTGATGTGAAGAAAAAAGCTATT
AATGGATTTAAGGAAGTGGTAGATGGATGTGTCTATTATTATGCAACAGCAGATTATGAC
CATTTATTTAGTTACAGAAAGCATGCCATAGAAGCCTATGCAATAAGTGGTTTGTCTTAG
AAAGCCATCACAAAGATGTTTAAAGGAAGTTAAACAGTTGCTTGGACAATTCCATGACTC
ATACCTTGTTAGCATGACCTTGAGATAATCAGTCAAATACATGCTCATCACTGCCATATC
CACAAAGTATTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAATATCCTTAACAGTGCTGATGTTCTGAGATTCTCATTTGTAGAATGACCTTTGATGTA
TCATTCATTTTTGTTGCTCATCATATAAATATCGGATTAAGTTTAGAGTTAAGATTAAGT
TAAGATTAGGTCATTGGTGTCACTGCATGTATCATTAAAGATCCAAGAGGAATTGTTGGG
CAGCAGGATTTGTGCTATGTGTTACATGGAGTGAGGGTTGATGTGAAGAAAAAAGCTATT
AATGGATTTAAGGAAGTGGTAGATGGATGTGTCTATTATTATGCAACAGCAGATTATGAC
CATTTATTTAGTTACAGAAAGCATGCCATAGAAGCCTATGCAATAAGTGGTTTGTCTTAG
AAAGCCATCACAAAGATGTTTAAAGGAAGTTAAACAGTTGCTTGGACAATTCCATGACTC
ATACCTTGTTAGCATGACCTTGAGATAATCAGTCAAATACATGCTCATCACTGCCATATC
CACAAAGTATTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-492, gnl|bosTau2|chr6 (2845429-2845912)
               

               
               5-492, gnl|Hg17|chr4 (120337780-120338261)
               

               
               5-492, gnl|Mm7|chr3 (122917250-122916819)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-492, gnl|bosTau2|chr6 (2845429-2845912)
               

               
               5-492, gnl|Hg17|chr4 (120337780-120338261)
               

               
               5-492, gnl|Mm7|chr3 (122917250-122916819)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               aor (0.195274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)

	5-492, gnl\|bosTau2\|chr6 (2845429-2845912)
	5-492, gnl\|Hg17\|chr4 (120337780-120338261)
	5-492, gnl\|Mm7\|chr3 (122917250-122916819)