Non-Coding RNA Search

Ss1.1-blip-UMC-pblivp1-006-f10.3

Sequence:


               
               AGAGGCTGTGCGAGTCCAAGTGCGCGTTCGAGAAGATGGTCACAAGCGAGGCGCTGGACG
GTGTCCCCATCCTGGTGCTGGCCAACAAGCAGGACATTGAGACTTGCCTCTCCATCCCCG
ACATCAAGACCGCATTCAGCGATTGCATCTCCAAGATCGGCAGGCGCGACTGCCTGACCC
AGGCCTGCTCGGCCCTCACGGGGTGAGTGGGGGCCTGGGCCCGCGCACCGGGGTCCGCGG
CCGGCCCCGCCTCACGCCCGCTGTCCCCACAGCAAGGGGGTGCGCGAGGGCATCGAGTGG
ATGGTGAAGTGCGTGGTGCGGAACGTTCACCGGCCACCGCGGCAGCGGGACATCACGTAG
CGCCTTGGCCCGGCCCCGGAGGAGCTCCTGCCGGCACCGCCGCCGACCCTGGGGGCTGGT
GCGCCCTGCCCTTCGGTTTTCCACCTGCTGTTTCCTCGAAAACAAACTTTCCTCTATGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAGGCTGTGCGAGTCCAAGTGCGCGTTCGAGAAGATGGTCACAAGCGAGGCGCTGGACG
GTGTCCCCATCCTGGTGCTGGCCAACAAGCAGGACATTGAGACTTGCCTCTCCATCCCCG
ACATCAAGACCGCATTCAGCGATTGCATCTCCAAGATCGGCAGGCGCGACTGCCTGACCC
AGGCCTGCTCGGCCCTCACGGGGTGAGTGGGGGCCTGGGCCCGCGCACCGGGGTCCGCGG
CCGGCCCCGCCTCACGCCCGCTGTCCCCACAGCAAGGGGGTGCGCGAGGGCATCGAGTGG
ATGGTGAAGTGCGTGGTGCGGAACGTTCACCGGCCACCGCGGCAGCGGGACATCACGTAG
CGCCTTGGCCCGGCCCCGGAGGAGCTCCTGCCGGCACCGCCGCCGACCCTGGGGGCTGGT
GCGCCCTGCCCTTCGGTTTTCCACCTGCTGTTTCCTCGAAAACAAACTTTCCTCTATGTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|47195859|emb|CAF93408.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47195859|emb|CAF93408.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               100-478, gnl|bosTau2|chr13 (35117325-35117723)
               

               
               100-478, gnl|Hg17|chr20 (61802500-61802084)
               

               
               100-478, gnl|Mm7|chr2 (181860653-181860229)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               100-478, gnl|bosTau2|chr13 (35117325-35117723)
               

               
               100-478, gnl|Hg17|chr20 (61802500-61802084)
               

               
               100-478, gnl|Mm7|chr2 (181860653-181860229)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eye (0.170503)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eye (0.170503)

	100-478, gnl\|bosTau2\|chr13 (35117325-35117723)
	100-478, gnl\|Hg17\|chr20 (61802500-61802084)
	100-478, gnl\|Mm7\|chr2 (181860653-181860229)