Ss1.1-blip-UMC-pblivp1-016-d05.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGGCGAGTTCGTGGACCTATACGTGCCTCGAAAATGCTCCGCCAGCAACCGCATCATCG GCGCCAAGGACCACGCGTCCATCCAGATGAACGTGGCCGAGGTTGACAAGGTGACAGGCA GGTTCAACGGCCAGTTTAAAACCTACGCCATCTGTGGTGCCATTCGCAGGATGGGAGAGT CAGAAGCCAGATTTTCATATCTTTCTTCCTTTTCTAGGAACTTCTGACTGGCGAGGCTCA CACATGTGGAATGTTGGTCATAAATAAATAGTGCAAGTCCGTCAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGGCGAGTTCGTGGACCTATACGTGCCTCGAAAATGCTCCGCCAGCAACCGCATCATCG GCGCCAAGGACCACGCGTCCATCCAGATGAACGTGGCCGAGGTTGACAAGGTGACAGGCA GGTTCAACGGCCAGTTTAAAACCTACGCCATCTGTGGTGCCATTCGCAGGATGGGAGAGT CAGAAGCCAGATTTTCATATCTTTCTTCCTTTTCTAGGAACTTCTGACTGGCGAGGCTCA CACATGTGGAATGTTGGTCATAAATAAATAGTGCAAGTCCGTCAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 3-295, gnl|bosTau2|chr11 (39796004-39796304) | |
| 3-295, gnl|canFam2|chr24 (26413653-26413860) | |
| 3-295, gnl|canFam2|chr4 (27377680-27377894) | |
| 3-295, gnl|dasNov1|scaffold_12360 (14891-14685) | |
| 3-295, gnl|dasNov1|scaffold_2082 (93140-92942) | |
| 3-295, gnl|echTel1|scaffold_264937 (13278-13484) | |
| 3-295, gnl|echTel1|scaffold_298006 (49470-49270) | |
| 3-295, gnl|hg17|chr18 (42556981-42557185) | |
| 3-295, gnl|hg17|chr20 (4942117-4942335) | |
| 3-295, gnl|Hg17|chr4 (15934432-15934134) | |
| 3-295, gnl|loxAfr1|scaffold_87892 (8675-8879) | |
| 3-295, gnl|loxAfr1|scaffold_87892 (8880-8667) | |
| 3-295, gnl|mm7|chr16 (88509825-88509612) | |
| 3-295, gnl|Mm7|chr16 (88509590-88509905) | |
| 3-295, gnl|mm7|chr16_random (3765140-3764931) | |
| 3-295, gnl|monDom2|scaffold_23 (21406129-21405922) | |
| 3-295, gnl|monDom2|scaffold_23 (21405924-21406129) | |
| 3-295, gnl|oryCun1|scaffold_197049 (20013-19806) | |
| 3-295, gnl|oryCun1|scaffold_200569 (97629-97837) | |
| 3-295, gnl|panTro1|chr17 (38896492-38896696) | |
| 3-295, gnl|panTro1|chr21_random (14664709-14664927) | |
| 3-295, gnl|rheMac2|chr10 (38352487-38352693) | |
| 3-295, gnl|rheMac2|chr18 (39781116-39781323) | |
| 3-295, gnl|rn3|chrUn (25815385-25815591) | |
| 3-295, gnl|rn3|chrX (94430945-94431158) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-295, gnl|bosTau2|chr11 (39796004-39796304) | |
| 3-295, gnl|canFam2|chr24 (26413653-26413860) | |
| 3-295, gnl|canFam2|chr4 (27377680-27377894) | |
| 3-295, gnl|dasNov1|scaffold_12360 (14891-14685) | |
| 3-295, gnl|dasNov1|scaffold_2082 (93140-92942) | |
| 3-295, gnl|echTel1|scaffold_264937 (13278-13484) | |
| 3-295, gnl|echTel1|scaffold_298006 (49470-49270) | |
| 3-295, gnl|hg17|chr18 (42556981-42557185) | |
| 3-295, gnl|hg17|chr20 (4942117-4942335) | |
| 3-295, gnl|Hg17|chr4 (15934432-15934134) | |
| 3-295, gnl|loxAfr1|scaffold_87892 (8675-8879) | |
| 3-295, gnl|loxAfr1|scaffold_87892 (8880-8667) | |
| 3-295, gnl|mm7|chr16 (88509825-88509612) | |
| 3-295, gnl|Mm7|chr16 (88509590-88509905) | |
| 3-295, gnl|mm7|chr16_random (3765140-3764931) | |
| 3-295, gnl|monDom2|scaffold_23 (21406129-21405922) | |
| 3-295, gnl|monDom2|scaffold_23 (21405924-21406129) | |
| 3-295, gnl|oryCun1|scaffold_197049 (20013-19806) | |
| 3-295, gnl|oryCun1|scaffold_200569 (97629-97837) | |
| 3-295, gnl|panTro1|chr17 (38896492-38896696) | |
| 3-295, gnl|panTro1|chr21_random (14664709-14664927) | |
| 3-295, gnl|rheMac2|chr10 (38352487-38352693) | |
| 3-295, gnl|rheMac2|chr18 (39781116-39781323) | |
| 3-295, gnl|rn3|chrUn (25815385-25815591) | |
| 3-295, gnl|rn3|chrX (94430945-94431158) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| lnt (0.142308) |