Non-Coding RNA Search

Ss1.1-mA2-MI-P-A2-aas-a-07-1-UM.s1.3

Sequence:


               
               TCTTAGCTTATCATGTCTAAGTTTTATTCTGCCACAACAGAAAACATTAATGAGTATACT
TAGCAACATATATAGTAAATTCTAGTGTTTGGAACAATCAACTGGACAGAAAATAATTTC
TGAACCTGAAGGTTCCTGGCTACAACTGCAACACTGTAATTTTTAAAACATTTAAATGTT
CAAAGGCGAAAGTAATATTGCAAATCTTGTGACAATGACCTTAGTTTCTGCCGTCCCAGA
ACTATATATATGGTAAATACCCCCAATTTTACAAGCAGGAAAAAGCAGCAATGAAAAAGT
CATTTCCTTTTACTTCCTATGCACATCAGCTCAGACAGTTTCTGTTTGCCCTATTAAAAT
AATTTACCCAATTGTGAGACCAAATTATTTTAGCAAAACAAATTAGTTTATAAAAGTTAA
TTTTCACACACCTCATTTTCTGAGGAGCTAAGAAATAGCAAATGTTTTTATAGGGTCTTT
AAACAGTTTTAAGCAGCCTCACTTGCCTGTATGTATAGGTGGACGACTCATGTGATACAA
TTTTTAGCTGACAGTAAATACACACAACCCCAAAGTGGTAGTAACTGGAGAAAAAGGCTC
TATACATCTATAAAGGCTCTATACATCTGCTTCTTCCCCCAGTTTGTGGACTATCAACCC
GTACTACAGAAGGTCGTATATACGGAGGACAAAAAGCAAAGCTTGGGGATTTTCCCTGGC
AAGTCCTGCTATTTGGTGAAACTATGGCAGCAGGTGCACTTGTATCTGACGACTGGATCC
TAACAGCTGCTCATGCTGTATATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTAGCTTATCATGTCTAAGTTTTATTCTGCCACAACAGAAAACATTAATGAGTATACT
TAGCAACATATATAGTAAATTCTAGTGTTTGGAACAATCAACTGGACAGAAAATAATTTC
TGAACCTGAAGGTTCCTGGCTACAACTGCAACACTGTAATTTTTAAAACATTTAAATGTT
CAAAGGCGAAAGTAATATTGCAAATCTTGTGACAATGACCTTAGTTTCTGCCGTCCCAGA
ACTATATATATGGTAAATACCCCCAATTTTACAAGCAGGAAAAAGCAGCAATGAAAAAGT
CATTTCCTTTTACTTCCTATGCACATCAGCTCAGACAGTTTCTGTTTGCCCTATTAAAAT
AATTTACCCAATTGTGAGACCAAATTATTTTAGCAAAACAAATTAGTTTATAAAAGTTAA
TTTTCACACACCTCATTTTCTGAGGAGCTAAGAAATAGCAAATGTTTTTATAGGGTCTTT
AAACAGTTTTAAGCAGCCTCACTTGCCTGTATGTATAGGTGGACGACTCATGTGATACAA
TTTTTAGCTGACAGTAAATACACACAACCCCAAAGTGGTAGTAACTGGAGAAAAAGGCTC
TATACATCTATAAAGGCTCTATACATCTGCTTCTTCCCCCAGTTTGTGGACTATCAACCC
GTACTACAGAAGGTCGTATATACGGAGGACAAAAAGCAAAGCTTGGGGATTTTCCCTGGC
AAGTCCTGCTATTTGGTGAAACTATGGCAGCAGGTGCACTTGTATCTGACGACTGGATCC
TAACAGCTGCTCATGCTGTATATA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               44-803, gnl|bosTau2|chr16 (22284559-22285344)
               

               
               44-803, gnl|Hg17|chr1 (11022885-11021811)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               44-803, gnl|bosTau2|chr16 (22284559-22285344)
               

               
               44-803, gnl|Hg17|chr1 (11022885-11021811)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               gul (0.177588)
               

               
               mga (0.160205)
               

               
               spl (0.143184)
               

               
               nmm (0.132802)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               gul (0.177588)
               

               
               mga (0.160205)
               

               
               spl (0.143184)
               

               
               nmm (0.132802)

	44-803, gnl\|bosTau2\|chr16 (22284559-22285344)
	44-803, gnl\|Hg17\|chr1 (11022885-11021811)