Non-Coding RNA Search

Ss1.1-mA2-MI-P-A2-afi-e-06-1-UM.s1.3

Sequence:


               
               TTTCTTCCCATGGGTAATTTTTAACTTCTTGTTTCTGTGCTTATATACTCAAACACTAAC
TTTTTTTTTTTTTAAAGAAAGGTACTAAGTATCTTTAATCAGCTGTTGGACAAGACTTTA
TTTTAAAGATTCATTTGTATGATATATCCCCATGTATATATAATTTTTTTTTTTTTTTTG
CCTAGTGAGTTTCAACATTTTAAAGTTTTCAAAAAGCCATTGGAATGTTAAATTAATGTA
AAGGGAACAGCTTATCTAGACCAAAGAATGGTACTTTCACACTTTTCTTTGTAACATTGA
ATGGTTTAAAATCCTCAAATCTGTCTGCTGAACTTTTGATTCTTTATTAGCACAATTACC
TATTTTTAAACACTGGCATTTTTCCAAAACTTGTGGCAGCTAACTTTTTAAAAATCTCAT
GACATGCAGTGTGAGTAGAAAGAAGTCAACGGTATGTGGGAGAGCACTTAGTTGTCTTTG
CTTTTTAAAGTGAGACTTGGTGCTAATCGTTTCAGGAATATTGTATTGTTCAAATGAAGA
TGGCTTTTGTACTTCCTGTGGACATGTGGTAATGTCTATATTGCCTCATAAAACTAACCT
AAAAAACAAATAAATGCTTTGGAAATGTTTCAGTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCTTCCCATGGGTAATTTTTAACTTCTTGTTTCTGTGCTTATATACTCAAACACTAAC
TTTTTTTTTTTTTAAAGAAAGGTACTAAGTATCTTTAATCAGCTGTTGGACAAGACTTTA
TTTTAAAGATTCATTTGTATGATATATCCCCATGTATATATAATTTTTTTTTTTTTTTTG
CCTAGTGAGTTTCAACATTTTAAAGTTTTCAAAAAGCCATTGGAATGTTAAATTAATGTA
AAGGGAACAGCTTATCTAGACCAAAGAATGGTACTTTCACACTTTTCTTTGTAACATTGA
ATGGTTTAAAATCCTCAAATCTGTCTGCTGAACTTTTGATTCTTTATTAGCACAATTACC
TATTTTTAAACACTGGCATTTTTCCAAAACTTGTGGCAGCTAACTTTTTAAAAATCTCAT
GACATGCAGTGTGAGTAGAAAGAAGTCAACGGTATGTGGGAGAGCACTTAGTTGTCTTTG
CTTTTTAAAGTGAGACTTGGTGCTAATCGTTTCAGGAATATTGTATTGTTCAAATGAAGA
TGGCTTTTGTACTTCCTGTGGACATGTGGTAATGTCTATATTGCCTCATAAAACTAACCT
AAAAAACAAATAAATGCTTTGGAAATGTTTCAGTTG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               10-636, gnl|bosTau2|chr28 (17273086-17272479)
               

               
               10-636, gnl|Hg17|chr10 (69346501-69347132)
               

               
               10-636, gnl|Mm7|chr10 (62839279-62838755)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-636, gnl|bosTau2|chr28 (17273086-17272479)
               

               
               10-636, gnl|Hg17|chr10 (69346501-69347132)
               

               
               10-636, gnl|Mm7|chr10 (62839279-62838755)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               tes (0.207814)
               

               
               ute (0.132784)
               

               
               kid (0.129735)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               ute (0.132784)
               

               
               kid (0.129735)

	10-636, gnl\|bosTau2\|chr28 (17273086-17272479)
	10-636, gnl\|Hg17\|chr10 (69346501-69347132)
	10-636, gnl\|Mm7\|chr10 (62839279-62838755)