Non-Coding RNA Search

Ss1.1-mAY1-MI-P-AY1-npu-h-03-0-UI.s1.3

Sequence:


               
               TTTTTTTTTTTTTTTTGCGGTCGCCTTTTGCGCTAGGCTGTCTGTCCCTGTTCTTGGTGG
TATTGGCCTGTCGTTCCACATGACAAATTCAAGTCTTATTTATTTAATACAGGAATATTT
TGCTGTTTAATATTTAAACAATGTTTAATATATTTCATTATAAACTGGTGTTGTAGTTTA
TGACTTGTTTCCCACGTGTCCATATCCTTTCCTAACTTTTTTTTTTTTAACAGCAGCGTG
ACAACAGTCCATATAGAGAAATAACCGATTCATAACGAGGACCACTTCGTCATTAATTCT
AAAGTAGAAGGAAGTAAAGCATTTCTCATCTGCTGTGCAGAAGTAGACAAATAGACTTTG
CTTATGGAAGGGAAGAGGCGTCCTTTTTAATTGGTCTGCACAGGAAAGTAAAAGTCAATT
ATTCATTTAAATCAAATTCCTTATCTAATAAACATTGAAGGAAATATTTTTCCTAAATAA
AAATTTTGTGACTCCTGAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTGCGGTCGCCTTTTGCGCTAGGCTGTCTGTCCCTGTTCTTGGTGG
TATTGGCCTGTCGTTCCACATGACAAATTCAAGTCTTATTTATTTAATACAGGAATATTT
TGCTGTTTAATATTTAAACAATGTTTAATATATTTCATTATAAACTGGTGTTGTAGTTTA
TGACTTGTTTCCCACGTGTCCATATCCTTTCCTAACTTTTTTTTTTTTAACAGCAGCGTG
ACAACAGTCCATATAGAGAAATAACCGATTCATAACGAGGACCACTTCGTCATTAATTCT
AAAGTAGAAGGAAGTAAAGCATTTCTCATCTGCTGTGCAGAAGTAGACAAATAGACTTTG
CTTATGGAAGGGAAGAGGCGTCCTTTTTAATTGGTCTGCACAGGAAAGTAAAAGTCAATT
ATTCATTTAAATCAAATTCCTTATCTAATAAACATTGAAGGAAATATTTTTCCTAAATAA
AAATTTTGTGACTCCTGAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-503, gnl|bosTau2|chr16 (5089354-5089843)
               

               
               1-503, gnl|Hg17|chr1 (189954188-189954688)
               

               
               1-503, gnl|Mm7|chr1 (143531888-143531439)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-503, gnl|bosTau2|chr16 (5089354-5089843)
               

               
               1-503, gnl|Hg17|chr1 (189954188-189954688)
               

               
               1-503, gnl|Mm7|chr1 (143531888-143531439)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cmu (0.186393)
               

               
               mgm (0.180343)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cmu (0.186393)
               

               
               mgm (0.180343)

	1-503, gnl\|bosTau2\|chr16 (5089354-5089843)
	1-503, gnl\|Hg17\|chr1 (189954188-189954688)
	1-503, gnl\|Mm7\|chr1 (143531888-143531439)